BAC Information

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BAC

Clone NameB6Ng01-292I01
Chromosome14 (Build37)
Map Location 3,516,758 - 3,517,884
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040452, LOC100040657, LOC100040671, LOC100040682, LOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846
Downstream geneEG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292I01.bB6Ng01-292I01.g
ACCGA089125GA089126
length1,2221,122
definitionB6Ng01-292I01.b B6Ng01-292I01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacacaaggagaggtttgtgtcacaggcgccggcgggagccttct
tggctccgggactccgtggagggcaggctgcacgggagaccgtgtggaat
acagaggccagccgtttctgggacgggcgaaagtcgcagagcttctgggg
cggtgccatcttcgtatccagacaaccggccaccttcctggcgagagcca
cagagcttctgaggcggcaacatcttcgactccagacaaccggccacctt
cctggccaaagcagcacagcttctgggaaagatcctgttttgggccttca
ccctcagccaggaggaggtccaaacaccagataactgtacaccttccccg
aaagaggagagcttgcctgcagagactgctctgaccactgaaactcagag
gagagagcttgtctcccacgcctgctgattgagggtaacaaaatcaacag
aggaacaatctcttaacaaagacaactataacaactaactccagagattg
ccagatggcgaaaggtaaacgtaagaatcctactaacagaaaccaggacc
actcaccatcatcagaacccagaacgcccacttcgcccagtccaggacac
cctaacacacctgaaaaggtagacctggatttaaaaggatatctcatgat
gatggtagaggacataaagaaggaattcaataactcacttaaagagatac
agggaaacactgctaaagagttacaagtccttaaagaaaaataggaaaac
actgctaaagagttacaagtccttaaagaaaaacaggaaaacacaaccaa
acaggtagaagtccttatagaaaaacaggaaaacacatacaaacaggtga
tggaaatgaacaaaaccatactagacctaaaaagggaagtagacacaata
aagaaaacccaaagtgaggcaacactgggagatagaaaccctaagaaaga
aatctgggaaccatagatgctcagcatcagcaacagaatacaagagatgg
gaagaagagaatctcaaggtgcagaagactccatagagaacatcggccac
aacaattaaagaaaatggaaaatgcaaaaaagatccttaactaaaaacat
ccaggaaatccaggacacacattggagaaggatcatccttacgggaataa
atagggattggatggaatgagacttcactcgaagacagccaaaacatctt
tctacaaccaaatattattttg
gaattcacactgctgtgcacaaacccacacacagacacagacacccaagt
gaaaaaagtcaaaaaatgtaacaacatgcttgaaaaacagcagttcactt
ctggtctgggatagctcagttggcctagaggaatgaagggctgggtttga
gtgagccccagtgttcatctgtgatcccagtgctgaggtaaaggcagcat
ggtcagaatgatggagatctgtgagttatcatctggctgctaactaaaag
caagggaggaacttgtagactgctcactcaccccacttaaccctcattca
aagtaaatgaaggacaggctacttaggcagcaggtaagaggccactgaac
aaagcatagtcacaaacaaagaggacccaacattccaaggcccctttaaa
ggagagattcaggaatgcaaatctagtcagtcaagtcacagaaagtgagg
gctggaaaccatccagtggcttagctctctccacaatccttagtgacctt
tatatgtgtagctccagtggaatattagccttggaagttagtatgacttg
ggagcatgctggatcaagtacgtgttttgaattttcggtttcaaaacgtg
tgaatgcatctgtctaccagactaagggccaggagatgcaggagtctgaa
gtccatgagagaggaaatgatccatgcaaatgcagtcactcctctgtttg
caactagatggaaactgtctccacagctagtaaagatgatttcagaaaag
atgattgaaaaacttgctagttgcaattttcattttctttttcccagaga
gcagcaggagagacagttgacatttgagctgtctctgaactgcccctgtc
cctaatttgagttgagagctcacagggaaccacagacctgctccttagct
ggttttcttttcacaaaatctttcagccatagaaaatgaacaaaagcagg
gctccccagccagcccagccagacatcccagctgccagaatagtgcttgg
gagcagctcaggggcgcaaagcacacccttgctctgttgagcaggtactg
ttcctgggccatgctcagctcagctcaggaggccatcacctggagcttac
aggcaacccgagcaaggaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_3516758_3517884
seq2: B6Ng01-292I01.g_67_1188

seq1  GAATTCACACTGCTGTGCACAAACCCACACACAGACACAGACACCCAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTGCTGTGCACAAACCCACACACAGACACAGACACCCAAGT  50

seq1  GAAAAAAGTCAAAAAATGTAACAACATGCTTGAAAAACAGCAGTTCACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGTCAAAAAATGTAACAACATGCTTGAAAAACAGCAGTTCACTT  100

seq1  CTGGTCTGGGATAGCTCAGTTGGCCTAGAGGAATGAAGGGCTGGGTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTGGGATAGCTCAGTTGGCCTAGAGGAATGAAGGGCTGGGTTTGA  150

seq1  GTGAGCCCCAGTGTTCATCTGTGATCCCAGTGCTGAGGTAAAGGCAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCCCAGTGTTCATCTGTGATCCCAGTGCTGAGGTAAAGGCAGCAT  200

seq1  GGTCAGAATGATGGAGATCTGTGAGTTATCATCTGGCTGCTAACTAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAATGATGGAGATCTGTGAGTTATCATCTGGCTGCTAACTAAAAG  250

seq1  CAAGGGAGGAACTTGTAGACTGCTCACTCACCCCACTTAACCCTCATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGGAACTTGTAGACTGCTCACTCACCCCACTTAACCCTCATTCA  300

seq1  AAGTAAATGAAGGACAGGCTACTTAGGCAGCAGGTAAGAGGCCACTGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATGAAGGACAGGCTACTTAGGCAGCAGGTAAGAGGCCACTGAAC  350

seq1  AAAGCATAGTCACAAACAAAGAGGACCCAACATTCCAAGGCCCCTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATAGTCACAAACAAAGAGGACCCAACATTCCAAGGCCCCTTTAAA  400

seq1  GGAGAGATTCAGGAATGCAAATCTAGTCAGTCAAGTCACAGAAAGTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATTCAGGAATGCAAATCTAGTCAGTCAAGTCACAGAAAGTGAGG  450

seq1  GCTGGAAACCATCCAGTGGCTTAGCTCTCTCCACAATCCTTAGTGACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAACCATCCAGTGGCTTAGCTCTCTCCACAATCCTTAGTGACCTT  500

seq1  TATATGTGTAGCTCCAGTGGAATATTAGCCTTGGAAGTTAGTATGACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTAGCTCCAGTGGAATATTAGCCTTGGAAGTTAGTATGACTTG  550

seq1  GGAGCATGCTGGATCAAGTACGTGTTTTGAATTTTCGGTTTCAAAACGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATGCTGGATCAAGTACGTGTTTTGAATTTTCGGTTTCAAAACGTG  600

seq1  TGAATGCATCTGTCTACCAGACTAAGGGCCAGGAGATGCAGGAGTCTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCATCTGTCTACCAGACTAAGGGCCAGGAGATGCAGGAGTCTGAA  650

seq1  GTCCATGAGAGAGGAAATGATCCATGCAAATGCAGTCACTCCTCTGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGAGAGAGGAAATGATCCATGCAAATGCAGTCACTCCTCTGTTTG  700

seq1  CAACTAGATGGAAACTGTCTCCACAGCTAGTAAAGATGATTTCAGAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGATGGAAACTGTCTCCACAGCTAGTAAAGATGATTTCAGAAAAG  750

seq1  ATGATTGAAAAACTTGCTAGTTGCAATTTTCATTTTCTTTTTCCCAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGAAAAACTTGCTAGTTGCAATTTTCATTTTCTTTTTCCCAGAGA  800

seq1  GCAGCAGGAGAGACAGTTGACATTTGAGCTGTCTCTGAACTGCCCCTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGGAGAGACAGTTGACATTTGAGCTGTCTCTGAACTGCCCCTGTC  850

seq1  CCTAATTTGAGTTGAGAGCTCACAGGGAACCACAGACCTGCTCCTTAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTTGAGTTGAGAGCTCACAGGGAACCACAGACCTGCTCCTTAGCT  900

seq1  GGTTTTCTTTTCACAAAATCTTTCAGCCATAGAAAATGAACAAAAGCAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTTTTCACAAAATCTTTCAGCCATAGAAAATGAACAAAAGCAGG  950

seq1  GCTCCCCAGCCAGCCCAGCCAGACATCCCAGCTGCCAGAATAGGTGCTTG  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCTCCCCAGCCAGCCCAGCCAGACATCCCAGCTGCCAGAATA-GTGCTTG  999

seq1  GGAGCAGCTCAGGGGCGCAAAGCACAACCTTGCTCTGTTGAAGCCAGGTA  1050
      |||||||||||||||||||||||||| ||||||||||||||   ||||||
seq2  GGAGCAGCTCAGGGGCGCAAAGCACACCCTTGCTCTGTTGA--GCAGGTA  1047

seq1  CTG-TCCTGGGCAATTGGCTCCAGGCTCAGCTCAGGAGGCAACCACCTGG  1099
      ||| |||||||| ||  ||||   |||||||||||||||| | |||||||
seq2  CTGTTCCTGGGCCAT--GCTC--AGCTCAGCTCAGGAGGCCATCACCTGG  1093

seq1  AGC-TACAGGC-ACCCGAGGCAAGGAATGC  1127
      ||| ||||||| |||||| |||||||||||
seq2  AGCTTACAGGCAACCCGA-GCAAGGAATGC  1122