BAC Information

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BAC

Clone NameB6Ng01-293A23
Chromosome14 (Build37)
Map Location 20,746,390 - 20,864,502
singlet/doubletdoublet
Overlap geneGng2
Upstream geneLOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534
Downstream gene1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293A23.bB6Ng01-293A23.g
ACCGA089535GA089536
length318948
definitionB6Ng01-293A23.b B6Ng01-293A23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,746,390 - 20,746,707)(20,863,560 - 20,864,502)
sequence
tccagtcaggccacagtggctggcgtttctccagctcaccagcaccagga
atgtaagtgcacaccacccgcctggcttattcacagggggtctggggggt
caatctcagatccttgtgcttgcagggcactttaccagctgagccatctc
tggacccttactgtaagataataagtaataaggagaaggggaaagtgcag
aacacagatgagcaagtggccattgattcttaatagcagtggtggtttgc
atgaaaaaaggactaggacaggtgcccttccttgttggaggaagtgtgtc
actggggggtggggggaa
gaattcctcagcctttgtaaggaaagaccaggcaatgaggctgggaccag
ctgaggaagagcttcgatagcacactaagaaatctggattggacctggta
agttctgaacatttgtaaggagggagtggatgagatgacaggtttttagg
aatgcgcctgcaatgacagcagagagtggaaatacgagcatacagatatg
aggaagaaaggcatggggaggctgactgctgagctaaacagatgctgctg
gaagtcacagaacaaggagccagcgaatgcagaatcaggcattcagtctt
ggagacacagatgttttctgccaatccattgcctctaccatttctttaga
gatcgtttcatagtctctccagctatgaatgttcttccttcaaagatcta
aagaaggaaacgtgtccagttaagagcctgaggttcaaaatgagaaacta
gcatttcagtctattctcttttaccttctagttgtgtagctctgggcaag
tttctgaaacacacacacacacacacacagaggtgtatgtgtgtgtaata
tataataatatataatatatattataatgcttgcttcatatggacattgt
aagtataaaaagtgatggtatctggtgaatcatttgtataaatgactaca
cacccaaatgtaagtactcagatgactgcttctcttcatgtgattgagct
tcaagctggtgggtgtgagtcttcacatctccatgcaagcattcatgagg
gagttgtcttcagtgtatgcctttccaagcataaataaatcatcactatt
caaaaaccaggtggaaaggacatgaaaaactatggtcaagaaatgctaaa
cacccaccccccccccccatgcttcattgcagaaaacctacgcacttgta
cctcaggcaacccaaaggctgggaagtcctacaattcctactcgatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20746390_20746707
seq2: B6Ng01-293A23.b_54_371

seq1  TCCAGTCAGGCCACAGTGGCTGGCGTTTCTCCAGCTCACCAGCACCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCAGGCCACAGTGGCTGGCGTTTCTCCAGCTCACCAGCACCAGGA  50

seq1  ATGTAAGTGCACACCACCCGCCTGGCTTATTCACAGGGGGTCTGGGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGTGCACACCACCCGCCTGGCTTATTCACAGGGGGTCTGGGGGGT  100

seq1  CAATCTCAGATCCTTGTGCTTGCAGGGCACTTTACCAGCTGAGCCATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCAGATCCTTGTGCTTGCAGGGCACTTTACCAGCTGAGCCATCTC  150

seq1  TGGACCCTTACTGTAAGATAATAAGTAATAAGGAGAAGGGGAAAGTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCTTACTGTAAGATAATAAGTAATAAGGAGAAGGGGAAAGTGCAG  200

seq1  AACACAGATGAGCAAGTGGCCATTGATTCTTAATAGCAGTGGTGGTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGATGAGCAAGTGGCCATTGATTCTTAATAGCAGTGGTGGTTTGC  250

seq1  ATGAAAAAAGGACTAGGACAGGTGCCCTTCCTTGTTGGAGGAAGTGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAAGGACTAGGACAGGTGCCCTTCCTTGTTGGAGGAAGTGTGTC  300

seq1  ACTGGGGGGTGGGGGGAA  318
      ||||||||||||||||||
seq2  ACTGGGGGGTGGGGGGAA  318

seq1: chr14_20863560_20864502
seq2: B6Ng01-293A23.g_68_1015 (reverse)

seq1  TCATTGAGTA-GAATTGTAGGACTTCCCAGCCCTTTGGCTGCCTG-TGTT  48
      |||| ||||| ||||||||||||||||||||| || || ||||||  || 
seq2  TCATCGAGTAGGAATTGTAGGACTTCCCAGCCTTTGGGTTGCCTGAGGTA  50

seq1  CCAGTGCCTAAGTTCTCTGCAATGAAGCAT-GGGGGGGGGGGTGGGTGTT  97
      | ||||| || ||| ||||||||||||||| |||||||||||||||||||
seq2  CAAGTGCGTAGGTTTTCTGCAATGAAGCATGGGGGGGGGGGGTGGGTGTT  100

seq1  TAGCATTTCTTGACCATAG-TTTTCATGTCCTTTCCACCTGGTTTTTGAA  146
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAGCATTTCTTGACCATAGTTTTTCATGTCCTTTCCACCTGGTTTTTGAA  150

seq1  TAGTGATGATTTATTTATGCTTGG-AAGGCATACACTGAAGACAACTCCC  195
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAGTGATGATTTATTTATGCTTGGAAAGGCATACACTGAAGACAACTCCC  200

seq1  TCATGAATGCTTGCATGGAGATGTGAAGACTCACACCCACCAGCTTGAAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAATGCTTGCATGGAGATGTGAAGACTCACACCCACCAGCTTGAAG  250

seq1  CTCAATCACATGAAGAGAAGCAGTCATCTGAGTACTTACATTTGGGTGTG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCACATGAAGAGAAGCAGTCATCTGAGTACTTACATTTGGGTGTG  300

seq1  TAGTCATTTATACAAATGATTCACCAGATACCATCACTTTTTATACTTAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTTATACAAATGATTCACCAGATACCATCACTTTTTATACTTAC  350

seq1  AATGTCCATATGAAGCAAGCATTATAATATATATTATATATTATTATATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCATATGAAGCAAGCATTATAATATATATTATATATTATTATATA  400

seq1  TTACACACACATACACCTCTGTGTGTGTGTGTGTGTGTGTTTCAGAAACT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACACACATACACCTCTGTGTGTGTGTGTGTGTGTGTTTCAGAAACT  450

seq1  TGCCCAGAGCTACACAACTAGAAGGTAAAAGAGAATAGACTGAAATGCTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGAGCTACACAACTAGAAGGTAAAAGAGAATAGACTGAAATGCTA  500

seq1  GTTTCTCATTTTGAACCTCAGGCTCTTAACTGGACACGTTTCCTTCTTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCATTTTGAACCTCAGGCTCTTAACTGGACACGTTTCCTTCTTTA  550

seq1  GATCTTTGAAGGAAGAACATTCATAGCTGGAGAGACTATGAAACGATCTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTGAAGGAAGAACATTCATAGCTGGAGAGACTATGAAACGATCTC  600

seq1  TAAAGAAATGGTAGAGGCAATGGATTGGCAGAAAACATCTGTGTCTCCAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATGGTAGAGGCAATGGATTGGCAGAAAACATCTGTGTCTCCAA  650

seq1  GACTGAATGCCTGATTCTGCATTCGCTGGCTCCTTGTTCTGTGACTTCCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAATGCCTGATTCTGCATTCGCTGGCTCCTTGTTCTGTGACTTCCA  700

seq1  GCAGCATCTGTTTAGCTCAGCAGTCAGCCTCCCCATGCCTTTCTTCCTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATCTGTTTAGCTCAGCAGTCAGCCTCCCCATGCCTTTCTTCCTCA  750

seq1  TATCTGTATGCTCGTATTTCCACTCTCTGCTGTCATTGCAGGCGCATTCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTATGCTCGTATTTCCACTCTCTGCTGTCATTGCAGGCGCATTCC  800

seq1  TAAAAACCTGTCATCTCATCCACTCCCTCCTTACAAATGTTCAGAACTTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACCTGTCATCTCATCCACTCCCTCCTTACAAATGTTCAGAACTTA  850

seq1  CCAGGTCCAATCCAGATTTCTTAGTGTGCTATCGAAGCTCTTCCTCAGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCCAATCCAGATTTCTTAGTGTGCTATCGAAGCTCTTCCTCAGCT  900

seq1  GGTCCCAGCCTCATTGCCTGGTCTTTCCTTACAAAGGCTGAGGAATTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCAGCCTCATTGCCTGGTCTTTCCTTACAAAGGCTGAGGAATTC  948