BAC Information

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BAC

Clone NameB6Ng01-293H12
Chromosome14 (Build37)
Map Location 11,171,640 - 11,290,959
singlet/doubletdoublet
Overlap geneFhit
Upstream geneLOC100042415
Downstream geneLOC100041974, LOC667030, EG382843, LOC100042427
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293H12.bB6Ng01-293H12.g
ACCGA089842GA089843
length1931,170
definitionB6Ng01-293H12.b B6Ng01-293H12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,290,767 - 11,290,959)(11,171,640 - 11,172,797)
sequence
gaattcttgctggccaatattgggaagcgagaagggaagattgaagtgtg
ttttcatagcagctaatgaggcgtctaatgagtcaaatgtcgctctgaag
ctcacctcattaagacagcatcttgttttcataaatgtcctggagtggct
ggacaattatatatatatatatatatatgtgtgtgtgtgtgtg

gaattcttttattcttgaacttcttttattcttgaaatacacacacacac
acacacacacacacacacacacagatatacacacacacacgcatatgcat
atatgtatatatactatatctatagagtacataatacatagtatatataa
atactgtttatagtatataatagaatagcatagcatatatagcatatact
atatataatatggtatgtgctatatattatatacacacacaaatatatat
atgaggagcattccatagtttcacttcaagtccatggaaaataccttgag
taaataagactttccctagcaacatgaaacacttccaatgagagtcaccc
cacaggtctccatcagttcagagtataggcctgatgctttgatatgacag
gaaagagaaagctgcaagcttggtaaagaaaactgttaactatgatgact
agtgaaagatacaatttttaagctcaggatgatatagtggacacccagcc
cctaatctcaagcacaggtcagtggctagaactccaaatgagatttaaag
gctcttggttttctagtttatctgctcagtgtgaaatcaataatacacag
ttctatatctatatttctgtagaatttcccatataaataaatgcccaaac
ctggacagggaggggcgatgctcattacttgtcttcattttagaccctga
ataactgaactctggttacaagccaaagtctaataaaggcagctgcagtc
aaactgatcagtcatctgccactaacaggctaagaactaacaaccttcct
agaccatacaccagtgactcagcctgtgtcagtctcatgccagtgacaat
cctggaagtgactgagaattcacccatcttacagacgcaaaagcagaggc
ttagggaagttcaaccacatgcccaagaagacttgattagttctgtttcg
ttttgttgtctttaagtccaacatcactgcttattaggaaaggattcaca
cgagatactgggcataacagataccttaaggaggaagacaggtgggggag
aagaacttcttctagcatacaactgggcctttaaggttggatcctccacc
accacagaaataaataaaggcaactggtgaatggccagacaaggaggtgt
catccaaggtattttaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_11290767_11290959
seq2: B6Ng01-293H12.b_42_234 (reverse)

seq1  CACACACACACACACATATATATATATATATATATAATTGTCCAGCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACATATATATATATATATATATAATTGTCCAGCCACT  50

seq1  CCAGGACATTTATGAAAACAAGATGCTGTCTTAATGAGGTGAGCTTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACATTTATGAAAACAAGATGCTGTCTTAATGAGGTGAGCTTCAGA  100

seq1  GCGACATTTGACTCATTAGACGCCTCATTAGCTGCTATGAAAACACACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACATTTGACTCATTAGACGCCTCATTAGCTGCTATGAAAACACACTT  150

seq1  CAATCTTCCCTTCTCGCTTCCCAATATTGGCCAGCAAGAATTC  193
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTCCCTTCTCGCTTCCCAATATTGGCCAGCAAGAATTC  193


seq1: chr14_11171640_11172797
seq2: B6Ng01-293H12.g_65_1234

seq1  GAATTCTTTTATTCTTGAACTTCTTTTATTCTTGAAATACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATTCTTGAACTTCTTTTATTCTTGAAATACACACACACAC  50

seq1  ACACACACACACACACACACACAGATATACACACACACACGCATATGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACAGATATACACACACACACGCATATGCAT  100

seq1  ATATGTATATATACTATATCTATAGAGTACATAATACATAGTATATATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATATATACTATATCTATAGAGTACATAATACATAGTATATATAA  150

seq1  ATACTGTTTATAGTATATAATAGAATAGCATAGCATATATAGCATATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTTTATAGTATATAATAGAATAGCATAGCATATATAGCATATACT  200

seq1  ATATATAATATGGTATGTGCTATATATTATATACACACACAAATATATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAATATGGTATGTGCTATATATTATATACACACACAAATATATAT  250

seq1  ATGAGGAGCATTCCATAGTTTCACTTCAAGTCCATGGAAAATACCTTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAGCATTCCATAGTTTCACTTCAAGTCCATGGAAAATACCTTGAG  300

seq1  TAAATAAGACTTTCCCTAGCAACATGAAACACTTCCAATGAGAGTCACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGACTTTCCCTAGCAACATGAAACACTTCCAATGAGAGTCACCC  350

seq1  CACAGGTCTCCATCAGTTCAGAGTATAGGCCTGATGCTTTGATATGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTCTCCATCAGTTCAGAGTATAGGCCTGATGCTTTGATATGACAG  400

seq1  GAAAGAGAAAGCTGCAAGCTTGGTAAAGAAAACTGTTAACTATGATGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAAGCTGCAAGCTTGGTAAAGAAAACTGTTAACTATGATGACT  450

seq1  AGTGAAAGATACAATTTTTAAGCTCAGGATGATATAGTGGACACCCAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAGATACAATTTTTAAGCTCAGGATGATATAGTGGACACCCAGCC  500

seq1  CCTAATCTCAAGCACAGGTCAGTGGCTAGAACTCCAAATGAGATTTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCTCAAGCACAGGTCAGTGGCTAGAACTCCAAATGAGATTTAAAG  550

seq1  GCTCTTGGTTTTCTAGTTTATCTGCTCAGTGTGAAATCAATAATACACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGGTTTTCTAGTTTATCTGCTCAGTGTGAAATCAATAATACACAG  600

seq1  TTCTATATCTATATTTCTGTAGAATTTCCCATATAAATAAATGCCCAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATCTATATTTCTGTAGAATTTCCCATATAAATAAATGCCCAAAC  650

seq1  CTGGACAGGGAGGGGCGATGCTCATTACTTGTCTTCATTTTAGACCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACAGGGAGGGGCGATGCTCATTACTTGTCTTCATTTTAGACCCTGA  700

seq1  ATAACTGAACTCTGGTTACAAGCCAAAGTCTAATAAAGGCAGCTGCAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGAACTCTGGTTACAAGCCAAAGTCTAATAAAGGCAGCTGCAGTC  750

seq1  AAACTGATCAGTCATCTGCCACTAACAGGCTAAGAACTAACAACCTTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGATCAGTCATCTGCCACTAACAGGCTAAGAACTAACAACCTTCCT  800

seq1  AGACCATACACCAGTGACTCAGCCTGTGTCAGTCTCATGCCAGTGACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATACACCAGTGACTCAGCCTGTGTCAGTCTCATGCCAGTGACAAT  850

seq1  CCTGGAAGTGACTGAGAATTCACCCATCTTACAGACGCAAAAGCAGAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGTGACTGAGAATTCACCCATCTTACAGACGCAAAAGCAGAGGC  900

seq1  TTAGGGAAGTTCAACCACATGCCCAAGAAGACTTGATTAGTTCTGTTTCG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAAGTTCAACCACATGCCCAAGAAGACTTGATTAGTTCTGTTTCG  950

seq1  TTTTGTTGTCTTTAAGTCCAACATCACTGCTTATTAGGAAAGGATTCAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTTGTTGTCTTTAAGTCCAACATCACTGCTTATTAGGAAAGGATTC-AC  999

seq1  ACGAGATACT-GGCATAACAGATACC-TAAAGAAGAAGACA---GTGGGA  1045
      |||||||||| ||||||||||||||| ||| || |||||||   | ||||
seq2  ACGAGATACTGGGCATAACAGATACCTTAAGGAGGAAGACAGGTGGGGGA  1049

seq1  G-AGAACT--CTCTAGCATACAACT-GGCCTT--AAGTTTGAT-CTCCAC  1088
      | ||||||   |||||||||||||| ||||||  | ||| ||| ||||||
seq2  GAAGAACTTCTTCTAGCATACAACTGGGCCTTTAAGGTTGGATCCTCCAC  1099

seq1  CACCACAGAAATAAATAAAAGCAACT-GTGATTGGCCAGACCAAGGAAGT  1137
      ||||||||||||||||||| |||||| |||| |||||||| |||||| ||
seq2  CACCACAGAAATAAATAAAGGCAACTGGTGAATGGCCAGA-CAAGGAGGT  1148

seq1  GTCATCAAAAGTA-TTTAAAGG  1158
      |||||| || ||| ||||||||
seq2  GTCATCCAAGGTATTTTAAAGG  1170


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