BAC Information

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BAC

Clone NameB6Ng01-294B01
Chromosome14 (Build37)
Map Location 23,766,185 - 23,767,254
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneZfp503, EG665075, EG435392, LOC665068
Downstream geneKcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294B01.bB6Ng01-294B01.g
ACCGA090291GA090292
length1,1871,082
definitionB6Ng01-294B01.b B6Ng01-294B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtcgtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
ttgtggctattgagaagggtgttgtttccctaatttcttctcagcctgtt
attctttgtgtagagaaagggcattgacttggttgagtattttatatcag
ctactcaccgagctgttatcaggttaggagttctcctgttggaattttaa
ggtactattatatactatccatttcaactcggcaaggtgaatttgacctc
tcttccaagttgagatactcccctctggaatcctccc

gaattcaatgaatgcagctctaacatgataaagtatcaccctacagccca
tagcaagttaaagtggagagacaactgacaatgatgggtgtgtgaagatc
ctgtctgacattccagaagagatgtttgaaatataaatgtggataaagca
ctttagactctacactacactatgctgtcagctagcaaagtgatattgaa
gacagtttcatctgttaactcgccttaatttttctcaataaaatgctagg
tattacaaatatcatagtcagtgtatatttgtcctctcaagatccagaaa
gcaagctagcatcatttagtctcaaagtagccaacaaaaccccagaaaat
tctaggccacagctaaatgttcattcaggttacctttgagcatcactcaa
gttaggatgcagggatagaggtatgagatggataggaagtaaatgtctgg
gcactgtccaggctattctgagcaccactcagaaatgggatgcatggata
ggggtatgtgacggacaggaagtgaaggactttatgtccaggttattctg
aacattactcagagatgggctgcagggatggagcacagttactgactaat
tagtagaagaacaagcattactcagcatgagacaacgccatttttgaaaa
cagaatgtataagagaatgcaaaaacacaaagagccatccgtcaatgtta
tatctatcatacttaacatttggaactggacctgcctgtcttagctgagc
ttgacttttcacatttctgggtagtaagaagacagcacagtgctaaagca
gaacactagactaagcataatagtcctttgtctttaatctgcatctaaca
agtcatgggggataccttgcatctgttctttcacctgttcatcaaaatgt
gagatgagttcaccaccatggtctctgcaatagtgcaaaatcagactaga
ttcagagacttgagaggtgtaaaagctttaaggtttgcctatccaagcaa
agaaagggaaatcaataaaattggatggacatttgtattcttcattaaga
ggaatgtgaatgctgttaactttgaaaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23766185_23767254
seq2: B6Ng01-294B01.g_69_1149 (reverse)

seq1  CTTTTTTCCAAGTTAACAACA-TCACA-TCCTCTT-ATGAAG-ATACAAA  46
      |||||||| ||||||||| || ||||| ||||||| |||||| |||||||
seq2  CTTTTTTCAAAGTTAACAGCATTCACATTCCTCTTAATGAAGAATACAAA  50

seq1  TGTCCATCC-ATTTTAATGGTTTTCCTTTCTTTTCTTGGATAGGCAAAAC  95
      ||||||||| |||||| || ||| ||||||||| |||||||||||||| |
seq2  TGTCCATCCAATTTTATTGATTTCCCTTTCTTTGCTTGGATAGGCAAACC  100

seq1  CTAAAGCTTTTACACCTCTCAAGTCTCTG-ATCTAGTCTGATTTTGCACT  144
       |||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTAAAGCTTTTACACCTCTCAAGTCTCTGAATCTAGTCTGATTTTGCACT  150

seq1  A-TGCAGAGACCATGGTGGTGAACTCATCTCACATTTTGATGAACAGGTG  193
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGAGACCATGGTGGTGAACTCATCTCACATTTTGATGAACAGGTG  200

seq1  AAAGAACAGATGCAAGGTATCCCCCATGACTTGTTAGATGCAGATT-AAG  242
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAGAACAGATGCAAGGTATCCCCCATGACTTGTTAGATGCAGATTAAAG  250

seq1  ACAAAGGACTATTATGCTTAGTCTAGTGTTCTGCTTTAGCACTGTGCTGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGACTATTATGCTTAGTCTAGTGTTCTGCTTTAGCACTGTGCTGT  300

seq1  CTTC-TACTACCCAGAAATGTG-AAAGTCAAGCTCAGCTAAGACAGGCAG  340
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTCTTACTACCCAGAAATGTGAAAAGTCAAGCTCAGCTAAGACAGGCAG  350

seq1  GTCCAGTTCCAAATGTTAAGTATGATAGATATAACATTGACGGATGGCTC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTTCCAAATGTTAAGTATGATAGATATAACATTGACGGATGGCTC  400

seq1  TTTGTG-TTTTGCATTCTCTTATACATTCTGTTTTCAAAAATGGCGTTGT  439
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTTTTGCATTCTCTTATACATTCTGTTTTCAAAAATGGCGTTGT  450

seq1  CTCATGCTGAGTAATGCTTGTTCTTCTACTAATTAGTCAGTAACTGTGCT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCTGAGTAATGCTTGTTCTTCTACTAATTAGTCAGTAACTGTGCT  500

seq1  CCATCCCTGCAGCCCATCTCTGAGTAATGTTCAGAATAACCTGGACATAA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTGCAGCCCATCTCTGAGTAATGTTCAGAATAACCTGGACATAA  550

seq1  AGTCCTTCACTTCCTGTCCGTCACATACCCCTATCCATGCATCCCATTTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTCACTTCCTGTCCGTCACATACCCCTATCCATGCATCCCATTTC  600

seq1  TGAGTGGTGCTCAGAATAGCCTGGACAGTGCCCAGACATTTACTTCCTAT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGTGCTCAGAATAGCCTGGACAGTGCCCAGACATTTACTTCCTAT  650

seq1  CCATCTCATACCTCTATCCCTGCATCCTAACTTGAGTGATGCTCAAAGGT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCATACCTCTATCCCTGCATCCTAACTTGAGTGATGCTCAAAGGT  700

seq1  AACCTGAATGAACATTTAGCTGTGGCCTAGAATTTTCTGGGGTTTTGTTG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAATGAACATTTAGCTGTGGCCTAGAATTTTCTGGGGTTTTGTTG  750

seq1  GCTACTTTGAGACTAAATGATGCTAGCTTGCTTTCTGGATCTTGAGAGGA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTGAGACTAAATGATGCTAGCTTGCTTTCTGGATCTTGAGAGGA  800

seq1  CAAATATACACTGACTATGATATTTGTAATACCTAGCATTTTATTGAGAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATACACTGACTATGATATTTGTAATACCTAGCATTTTATTGAGAA  850

seq1  AAATTAAGGCGAGTTAACAGATGAAACTGTCTTCAATATCACTTTGCTAG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGGCGAGTTAACAGATGAAACTGTCTTCAATATCACTTTGCTAG  900

seq1  CTGACAGCATAGTGTAGTGTAGAGTCTAAAGTGCTTTATCCACATTTATA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCATAGTGTAGTGTAGAGTCTAAAGTGCTTTATCCACATTTATA  950

seq1  TTTCAAACATCTCTTCTGGAATGTCAGACAGGATCTTCACACACCCATCA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACATCTCTTCTGGAATGTCAGACAGGATCTTCACACACCCATCA  1000

seq1  TTGTCAGTTGTCTCTCCACTTTAACTTGCTATGGGCTGTAGGGTGATACT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTTGTCTCTCCACTTTAACTTGCTATGGGCTGTAGGGTGATACT  1050

seq1  TTATCATGTTAGAGCTGCATTCATTGAATTC  1070
      |||||||||||||||||||||||||||||||
seq2  TTATCATGTTAGAGCTGCATTCATTGAATTC  1081


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