BAC Information

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BAC

Clone NameB6Ng01-296J09
Chromosome14 (Build37)
Map Location 73,549,071 - 73,550,146
singlet/doubletsinglet
Overlap geneRcbtb2
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149
Downstream geneRb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296J09.bB6Ng01-296J09.g
ACCGA092161GA092162
length1,0801,179
definitionB6Ng01-296J09.b B6Ng01-296J09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcgtcacagcctagccgtgaattaggttgtcatgcgcagtacat
taactgaggattgttttctcagtgcccttaaactttatcaagtggtctgt
tacaccgtttgtattattttgtgatatagtggtttgttcaacattgctaa
atctaggaaattatttttagaggtttatttctaagtgtgtgtatgtgtgt
gtaggtttgtacatgtgtgagagggtgcttgtagagatggaaagaggcca
tgggatcccttgcagctggagtgcagacagttgtgagctgggagccaagc
tctgatcctctggaagagcagaaacctgcactcttaactgctgagccatc
tccccagcccctagagaatctatattagttgattatggtatgtttgtgcc
acgggttgtcagtctgttggtagattctgttcaccccattttttgttttt
gttttttattattccttagggttttttctctggtttgctactactgcagg
cttcatctttttaaaactgtgaagtcatgttaaccacattctcttttaca
ttgaaatagtatggagtgacataggactgtgatggacagaaaagcagagt
agtataaacaaagagattcactgtctcatgtaggaggggtgagaattatt
tcataagatgatgtgttagtcaacattgtgttgctatgacaaaatgccta
aggaaaccctttaaacagaggaaaggtttacagcacagtctcaggcctct
tgcttttggcgcattctagttggagcccatggtagagctgaatgcttatt
tcatggcagcctggaaacggagagaggaaaagaccaaagataagatatgt
cctatggctggcaaggtggcccagtggttaagagcactggctgatcttcc
aagggacctgggttcaagtcccagcacccacatggctgcccaaagcatct
tctaactccagtctcccagatccagcactgtctccttgtcttttggcact
aggccaatgtatgtttcaaaagacaagcataatacaataaaaacttatac
atgttaaaattaaataacattaggtgtgtt
gaattcaataaaaatactgaaatggaagccataaaatacacatggagggc
cttactctctgtgagtttatgtgaactttgatcatggtgatttagagggt
actcttttcttgaccttccaactcatctggctcgtacactttttctgtct
cctcttctgtggggtcccatgatccctgaggggagagattgatggggact
tcccatttaggacattcccttggagtgttccaaggtcttctactttctgc
atcatgtctggctgtgggtctatgtatttttctcatctgctgtaagagaa
gacttccctgaaaatggctgagcaaggcactgatatataagtatagcgaa
tgtcattagtagctttgttttattgccatactcttttagtggaatagtaa
catttggttttatcctaggagcttgagctatctaatctcaggttcttagt
cattcaagcaaagttgggcataggttccatcttgtggagtgggctttcag
tcaaatcgaatgttggttggttactcaaacaaacattgtgccaccattgc
cctagcagatcttgtaggtaggacaccattgtagatcaaacagtttgtag
ctgagttggtggttacatttctcttttggtagtgcagagtaccttcctat
agcaaagatgctagactgtagggatgaagacattatgtaggcaccagctc
aacttctccatggtcagtgggttgtgtgggtgttgtcttcagcagtgggg
ccttgctatcagtttgtgacgaacaacctatagtcttggcacaatatggg
ttgtttggggttcccatggcactcctttggccaactcaacttacatcaac
tcaattagatgtaacccaatcttggtactggaagattcatttggtgacag
aggatgtccacttggggatctgtctcccttcattactttggtgattttat
ttaaatcaccttcgtatatgtatatattttaaggagcttctactgtatta
ggtttctatactattctcttcaatagccttaaatttgatgtttctcctcc
aacattccttccttcaatcctcctctaatttgattcctccttgatcctgc
caccccctcccataatggaaatagtttccttcctagtaaggcttccatct
ctacgttattccttaacctggtatgacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73549071_73550146
seq2: B6Ng01-296J09.b_49_1127

seq1  GAATTCTCGTCACAGCCTAGCCGTGAATTAGGTTGTCATGCGCAGTACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGTCACAGCCTAGCCGTGAATTAGGTTGTCATGCGCAGTACAT  50

seq1  TAACTGAGGATTGTTTTCTCAGTGCCCTTAAACTTTATCAAGTGGTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGGATTGTTTTCTCAGTGCCCTTAAACTTTATCAAGTGGTCTGT  100

seq1  TACACCGTTTGTATTATTTTGTGATATAGTGGTTTGTTCAACATTGCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCGTTTGTATTATTTTGTGATATAGTGGTTTGTTCAACATTGCTAA  150

seq1  ATCTAGGAAATTATTTTTAGAGGTTTATTTCTAAGTGTGTGTATGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGAAATTATTTTTAGAGGTTTATTTCTAAGTGTGTGTATGTGTGT  200

seq1  GTAGGTTTGTACATGTGTGAGAGGGTGCTTGTAGAGATGGAAAGAGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTTGTACATGTGTGAGAGGGTGCTTGTAGAGATGGAAAGAGGCCA  250

seq1  TGGGATCCCTTGCAGCTGGAGTGCAGACAGTTGTGAGCTGGGAGCCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATCCCTTGCAGCTGGAGTGCAGACAGTTGTGAGCTGGGAGCCAAGC  300

seq1  TCTGATCCTCTGGAAGAGCAGAAACCTGCACTCTTAACTGCTGAGCCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCCTCTGGAAGAGCAGAAACCTGCACTCTTAACTGCTGAGCCATC  350

seq1  TCCCCAGCCCCTAGAGAATCTATATTAGTTGATTATGGTATGTTTGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGCCCCTAGAGAATCTATATTAGTTGATTATGGTATGTTTGTGCC  400

seq1  ACGGGTTGTCAGTCTGTTGGTAGATTCTGTTCACCCCATTTTTTGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGTTGTCAGTCTGTTGGTAGATTCTGTTCACCCCATTTTTTGTTTTT  450

seq1  GTTTTTTATTATTCCTTAGGGTTTTTTCTCTGGTTTGCTACTACTGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTATTATTCCTTAGGGTTTTTTCTCTGGTTTGCTACTACTGCAGG  500

seq1  CTTCATCTTTTTAAAACTGTGAAGTCATGTTAACCACATTCTCTTTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTTTTTAAAACTGTGAAGTCATGTTAACCACATTCTCTTTTACA  550

seq1  TTGAAATAGTATGGAGTGACATAGGACTGTGATGGACAGAAAAGCAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATAGTATGGAGTGACATAGGACTGTGATGGACAGAAAAGCAGAGT  600

seq1  AGTATAAACAAAGAGATTCACTGTCTCATGTAGGAGGGGTGAGAATTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAACAAAGAGATTCACTGTCTCATGTAGGAGGGGTGAGAATTATT  650

seq1  TCATAAGATGATGTGTTAGTCAACATTGTGTTGCTATGACAAAATGCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGATGATGTGTTAGTCAACATTGTGTTGCTATGACAAAATGCCTA  700

seq1  AGGAAACCCTTTAAACAGAGGAAAGGTTTACAGCACAGTCTCAGGCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACCCTTTAAACAGAGGAAAGGTTTACAGCACAGTCTCAGGCCTCT  750

seq1  TGCTTTTGGCGCATTCTAGTTGGAGCCCATGGTAGAGCTGAATGCTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGGCGCATTCTAGTTGGAGCCCATGGTAGAGCTGAATGCTTATT  800

seq1  TCATGGCAGCCTGGAAACGGAGAGAGGAAAAGACCAAAGATAAGATATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCAGCCTGGAAACGGAGAGAGGAAAAGACCAAAGATAAGATATGT  850

seq1  CCTATGGCTGGCAAGGTGGCCCAGTGGTTAAGAGCACTGGCTGATCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGCTGGCAAGGTGGCCCAGTGGTTAAGAGCACTGGCTGATCTTCC  900

seq1  AAGGGACCTGGGTTCAAGTCCCAGCACCCACATGGCTGCCCAAAGCATC-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGGGACCTGGGTTCAAGTCCCAGCACCCACATGGCTGCCCAAAGCATCT  950

seq1  TCTAACTCCAGTCTCCCAAGATCCAGCACTGTCTCCTGGCCTTTTTGGGC  999
      ||||||||||||||||| ||||||||||||||||||| | |||||  |||
seq2  TCTAACTCCAGTCTCCC-AGATCCAGCACTGTCTCCTTGTCTTTT--GGC  997

seq1  ACTAGGCCAATGTATGTTTC-AAAGACAAGCAT-ATACA--TAAAACCTA  1045
      |||||||||||||||||||| |||||||||||| |||||   ||||| ||
seq2  ACTAGGCCAATGTATGTTTCAAAAGACAAGCATAATACAATAAAAACTTA  1047

seq1  TACATG-TAAAATTAAAT-ACA-TAGGGGTGTGT  1076
      |||||| ||||||||||| ||| |||| ||||  
seq2  TACATGTTAAAATTAAATAACATTAGGTGTGT--  1079