BAC Information

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BAC

Clone NameB6Ng01-297E12
Chromosome14 (Build37)
Map Location 100,367,482 - 100,482,788
singlet/doubletdoublet
Overlap geneKlf12
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneLOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297E12.bB6Ng01-297E12.g
ACCGA092676GA092677
length9921,106
definitionB6Ng01-297E12.b B6Ng01-297E12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,481,800 - 100,482,788)(100,367,482 - 100,368,581)
sequence
gaattcaaggctttagaatacacaaagtttcctaagtaggataaaatgat
aatatatttgtctgtcaaggaaataatattttatttcttcttagaagtcc
tcaaaaataggctttaagtggtgtgtttgtttttatataaaaaatgttat
ctcagtcttctggttctaataatttatctgctcctgccatgatgttccct
gaaccttgggtagatgtagggcttgtactgtagatgttccatttgggaat
aagcgtgccatagtcaattcctttaccctgactagttactttgaggaagc
cagaggactgcactaacctgtgggtgtcaaggtaagtatgtggaaagcag
attgatactatatcaattcagcaaaatggcagtagcaagttttcttctaa
ggtctacaacctttccagctttagctaggtttacagtaccaggaacaagt
tctcttccattgagtgtgatggaaatccaatccgatccctgtgactacca
ccaagacattggcacattattttactgtttggtgggagccttgggaggcg
atagggaagtgagggaagagtgggtatgatcaaaatgcattttactcatg
catgaagttctcaaagaagtggaattggtcaacaggctatgtgattgata
gccataattatgttatagaatgatagttggactgaatgagactagtgatt
ataagagaccgttaatgcatgtttgaattaaaacccagtgtcaagaaatg
aattatatgatgaagaaaatcagaagaataaggaagagatgaatttagag
gctatctagattttataatggcatttgtccattgaggaaataggggaaaa
ttgagatgaaagtaatttgtgaggaaaagggaagtggctggctgtagata
gaaataatgcccttggggtggtgctaatatgatgatgtgaacatttcata
ttggaggattcatataatgaatcttaattattttcctgatgg

gaattcttacatttaccacctcaggaagctcatttatggggatcttaaac
acatgtgttagatgaagagatctgctgggagctgatctcagaaaagaaaa
tgtgaaagtacaaaccagtgtgattacagcctggggatttggaaaaaatg
taggaagcatgcccgagtagtattgtcctataagtgcaattacaaaatta
attaaaattctaaacacttccacgaagcatggttgtcttcatgtattaga
aagcatgttaaaaattcactttcagacaccacagctgaatcttctcattc
tgcgagtttacagttgacaaagccttttgtttatccataataataatagc
ttggggctgcaaacagactttctggatcagagttccctccttgaacaatg
tgttcattattagcatggttttcatttattattattacatatttgtatgc
atgccacgttgcatgtggaggtcagaggacgactcggagagtgggttctc
tttcataccaagctccaggtcatcaggtgtgtaccaagggattttacctg
atgaactatcttgcatgacttttattagtatttctcaggtttagctattt
tgattttttttactgcctcacttataaaccatcattaaccttaaatacta
tgcatcgttatatcttgtctttgaataaaatactatataattgttttact
tttagacactagcctctgaacttctttatttaaattcatgtattacagat
tattaaggaacaaatgtacaattgtagatgtgtgagccaagctgagtcat
aatatccactttctgcatacaggcagccattacttcagagagccgccgtg
catcctgtgaacagaccagcatacacctggaaccacggagcagactgcaa
aggatgcaggccactctaagaagttatgtttaccaaggttttgttctttc
atgtatgttcaatgacgtaacagactggaatagcattctgagaagtccat
gtagtataaactctaacattttctttttggtggaagggattagaagacag
agtaacatttcttgtttgtcttgcttggagttggtgaaggacagaatcat
cctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100481800_100482788
seq2: B6Ng01-297E12.b_48_1039 (reverse)

seq1  CCATCA-GAAAATAATTAAGATTCATTATACTGAAT-CTTCAATTTGAAA  48
      |||||| ||||||||||||||||||||||| ||||| || |||| |||||
seq2  CCATCAGGAAAATAATTAAGATTCATTATA-TGAATCCTCCAATATGAAA  49

seq1  TGTTCACATCATCATATTAGCACCACCCCAAGGGCATTA-TTCTATCTAC  97
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTTCACATCATCATATTAGCACCACCCCAAGGGCATTATTTCTATCTAC  99

seq1  AGCCAGCCACTTCCCTTTTCCTCACAAATTAC-TTCATCTCAATTTTCCC  146
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGCCAGCCACTTCCCTTTTCCTCACAAATTACTTTCATCTCAATTTTCCC  149

seq1  CTATTTCCTCAATGGACAAATGCCATTATAAAATCTAGATAGCCTCTAAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCTCAATGGACAAATGCCATTATAAAATCTAGATAGCCTCTAAA  199

seq1  TTCATCTCTTCCTTATTCTTCTGATTTTCTTCATCATATAATTCATTTCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCTTCCTTATTCTTCTGATTTTCTTCATCATATAATTCATTTCT  249

seq1  TGACACTGGGTTTTAATTCAAACATGCATTAACGGTCTCTTATAATCACT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTGGGTTTTAATTCAAACATGCATTAACGGTCTCTTATAATCACT  299

seq1  AGTCTCATTCAGTCCAACTATCATTCTATAACATAATTATGGCTATCAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATTCAGTCCAACTATCATTCTATAACATAATTATGGCTATCAAT  349

seq1  CACATAGCCTGTTGACCAATTCCACTTCTTTGAGAACTTCATGCATGAGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGCCTGTTGACCAATTCCACTTCTTTGAGAACTTCATGCATGAGT  399

seq1  AAAATGCATTTTGATCATACCCACTCTTCCCTCACTTCCCTATCGCCTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCATTTTGATCATACCCACTCTTCCCTCACTTCCCTATCGCCTCC  449

seq1  CAAGGCTCCCACCAAACAGTAAAATAATGTGCCAATGTCTTGGTGGTAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTCCCACCAAACAGTAAAATAATGTGCCAATGTCTTGGTGGTAGT  499

seq1  CACAGGGATCGGATTGGATTTCCATCACACTCAATGGAAGAGAACTTGTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGATCGGATTGGATTTCCATCACACTCAATGGAAGAGAACTTGTT  549

seq1  CCTGGTACTGTAAACCTAGCTAAAGCTGGAAAGGTTGTAGACCTTAGAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTACTGTAAACCTAGCTAAAGCTGGAAAGGTTGTAGACCTTAGAAG  599

seq1  AAAACTTGCTACTGCCATTTTGCTGAATTGATATAGTATCAATCTGCTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGCTACTGCCATTTTGCTGAATTGATATAGTATCAATCTGCTTT  649

seq1  CCACATACTTACCTTGACACCCACAGGTTAGTGCAGTCCTCTGGCTTCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATACTTACCTTGACACCCACAGGTTAGTGCAGTCCTCTGGCTTCCT  699

seq1  CAAAGTAACTAGTCAGGGTAAAGGAATTGACTATGGCACGCTTATTCCCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAACTAGTCAGGGTAAAGGAATTGACTATGGCACGCTTATTCCCA  749

seq1  AATGGAACATCTACAGTACAAGCCCTACATCTACCCAAGGTTCAGGGAAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAACATCTACAGTACAAGCCCTACATCTACCCAAGGTTCAGGGAAC  799

seq1  ATCATGGCAGGAGCAGATAAATTATTAGAACCAGAAGACTGAGATAACAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGCAGGAGCAGATAAATTATTAGAACCAGAAGACTGAGATAACAT  849

seq1  TTTTTATATAAAAACAAACACACCACTTAAAGCCTATTTTTGAGGACTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATATAAAAACAAACACACCACTTAAAGCCTATTTTTGAGGACTTC  899

seq1  TAAGAAGAAATAAAATATTATTTCCTTGACAGACAAATATATTATCATTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAAATAAAATATTATTTCCTTGACAGACAAATATATTATCATTT  949

seq1  TATCCTACTTAGGAAACTTTGTGTATTCTAAAGCCTTGAATTC  989
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTACTTAGGAAACTTTGTGTATTCTAAAGCCTTGAATTC  992


seq1: chr14_100367482_100368581
seq2: B6Ng01-297E12.g_68_1173

seq1  GAATTCTTACATTTACCACCTCAGGAAGCTCATTTATGGGGATCTTAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACATTTACCACCTCAGGAAGCTCATTTATGGGGATCTTAAAC  50

seq1  ACATGTGTTAGATGAAGAGATCTGCTGGGAGCTGATCTCAGAAAAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGTTAGATGAAGAGATCTGCTGGGAGCTGATCTCAGAAAAGAAAA  100

seq1  TGTGAAAGTACAAACCAGTGTGATTACAGCCTGGGGATTTGGAAAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGTACAAACCAGTGTGATTACAGCCTGGGGATTTGGAAAAAATG  150

seq1  TAGGAAGCATGCCCGAGTAGTATTGTCCTATAAGTGCAATTACAAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGCATGCCCGAGTAGTATTGTCCTATAAGTGCAATTACAAAATTA  200

seq1  ATTAAAATTCTAAACACTTCCACGAAGCATGGTTGTCTTCATGTATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTCTAAACACTTCCACGAAGCATGGTTGTCTTCATGTATTAGA  250

seq1  AAGCATGTTAAAAATTCACTTTCAGACACCACAGCTGAATCTTCTCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGTTAAAAATTCACTTTCAGACACCACAGCTGAATCTTCTCATTC  300

seq1  TGCGAGTTTACAGTTGACAAAGCCTTTTGTTTATCCATAATAATAATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGTTTACAGTTGACAAAGCCTTTTGTTTATCCATAATAATAATAGC  350

seq1  TTGGGGCTGCAAACAGACTTTCTGGATCAGAGTTCCCTCCTTGAACAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCTGCAAACAGACTTTCTGGATCAGAGTTCCCTCCTTGAACAATG  400

seq1  TGTTCATTATTAGCATGGTTTTCATTTATTATTATTACATATTTGTATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTATTAGCATGGTTTTCATTTATTATTATTACATATTTGTATGC  450

seq1  ATGCCACGTTGCATGTGGAGGTCAGAGGACGACTCGGAGAGTGGGTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACGTTGCATGTGGAGGTCAGAGGACGACTCGGAGAGTGGGTTCTC  500

seq1  TTTCATACCAAGCTCCAGGTCATCAGGTGTGTACCAAGGGATTTTACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACCAAGCTCCAGGTCATCAGGTGTGTACCAAGGGATTTTACCTG  550

seq1  ATGAACTATCTTGCATGACTTTTATTAGTATTTCTCAGGTTTAGCTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTATCTTGCATGACTTTTATTAGTATTTCTCAGGTTTAGCTATTT  600

seq1  TGATTTTTTTTACTGCCTCACTTATAAACCATCATTAACCTTAAATACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTACTGCCTCACTTATAAACCATCATTAACCTTAAATACTA  650

seq1  TGCATCGTTATATCTTGTCTTTGAATAAAATACTATATAATTGTTTTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCGTTATATCTTGTCTTTGAATAAAATACTATATAATTGTTTTACT  700

seq1  TTTAGACACTAGCCTCTGAACTTCTTTATTTAAATTCATGTATTACAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACACTAGCCTCTGAACTTCTTTATTTAAATTCATGTATTACAGAT  750

seq1  TATTAAGGAACAAATGTACAATTGTAGATGTGTGAGCCAAGCTGAGTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGGAACAAATGTACAATTGTAGATGTGTGAGCCAAGCTGAGTCAT  800

seq1  AATATCCACTTTCTGCATACAGGCAGCCATTACTTCAGAGAGCCGCCGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCACTTTCTGCATACAGGCAGCCATTACTTCAGAGAGCCGCCGTG  850

seq1  CATCCTGTGAACAGACCAGCATACACCTGG-ACCACGGAGCAGACTGCAA  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CATCCTGTGAACAGACCAGCATACACCTGGAACCACGGAGCAGACTGCAA  900

seq1  AGGATGCAGGCCACTCTAAGAAGTTATGTTTACCAAGGTTTTGTTCTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCAGGCCACTCTAAGAAGTTATGTTTACCAAGGTTTTGTTCTTTC  950

seq1  ATGTATGTTCAAATGACGTAACAGACTGGAATAGCA-TCTGAG-AGTCCA  997
      |||||||||| ||||||||||||||||||||||||| |||||| ||||||
seq2  ATGTATGTTC-AATGACGTAACAGACTGGAATAGCATTCTGAGAAGTCCA  999

seq1  TGTAGTATAAACTCT-ACATTTTCTTTT--GTGG-AGGGATTAG-AGACA  1042
      ||||||||||||||| ||||||||||||  |||| ||||||||| |||| 
seq2  TGTAGTATAAACTCTAACATTTTCTTTTTGGTGGAAGGGATTAGAAGAC-  1048

seq1  AGAGGTAACATTTC-TGTTTGTCTTGCTT-GAGT--GTGAAAGGACAGAA  1088
      ||| |||||||||| |||||||||||||| ||||  ||| ||||||||||
seq2  AGA-GTAACATTTCTTGTTTGTCTTGCTTGGAGTTGGTG-AAGGACAGAA  1096

seq1  TTCATCCCTCAG  1100
       |||| ||||||
seq2  -TCAT-CCTCAG  1106


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