BAC Information

Click to search

BAC

Clone NameB6Ng01-298H02
Chromosome14 (Build37)
Map Location 111,160,395 - 111,161,088
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6
Downstream geneEG668772, EG622052, LOC100043491, LOC100043494, Slitrk5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298H02.bB6Ng01-298H02.g
ACCGA093546GA093547
length694619
definitionB6Ng01-298H02.b B6Ng01-298H02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcatgttgaaaaatgagcaatatacaaaaatgcaggcaagcc
cttgtgctgaaacagtgttaatccaagaagtttgcttacagggagaaact
ctgaggtaggacctaactctcctttgtattattattattattattattat
tattattattattattattattgcctatacatgactgtagagtatgttgc
agagataagtagcctctcaagaaaaattatatatatatatatatatatat
atatatatatatatatatatatatatacacacacaatgatatcagatcac
atgttacatgaatgtgtaaaattccatgaaggcccagccctatatgaaag
acaattaatggcttttgagaaagggagattggaacttttctaatgagaaa
cctcaaaaggttacccagaatcaagtgctcagctcaaacacacatgtgta
tgagtatagaagatattttgaagcgttataaaactcagagaattaacctt
tgattgataaattaaacctcagataagtgaaaaatatcctttcagaatta
acctatatttgtcctaaagatacatattcattttatattttacttggaac
atgcttgaaaaatgtaagactgtaactatcttaattcaaaaaaattctaa
aatttttctcttccaaaaagtatgtttaaggggggagggggagg
gaattcaccatactacattctgaaactcaagaagaaggaagaccaaagta
tggatactttgttccttcttagaagggggaacaaaatacccatggaagga
gttacagagacaaaatgtgaagcagagactgaaggaatgagcttacagag
actgcccaacctggagatccatcccataaacaaccaccaaaaccagacac
tattgtggataccaacaagagcttgctgacccaaccctgaaattgctgtc
tcctgagaggctctgccagtgcctggcaaatacaaaagtggatgctcaca
gccatccattggacagaggacagggtccccagtgaaggagctagagaaag
tacccaagtagctgaaagagcttgcagccccataggaagaacaacaatat
gaactaaccagtatctccagagctccctggtactaaaccaccaaccaaag
aaaacacatgatgggactcttggctctatctgcatctgtaacagaggatg
gtcttgtcagtcttccataggaggagaggcccttggtcctgtgaagctta
tatgccccagtataggggactgccagggccagaaagcagaagtgggtggg
ttggtgagtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111160395_111161088
seq2: B6Ng01-298H02.b_48_741

seq1  GAATTCTTTCATGTTGAAAAATGAGCAATATACAAAAATGCAGGCAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATGTTGAAAAATGAGCAATATACAAAAATGCAGGCAAGCC  50

seq1  CTTGTGCTGAAACAGTGTTAATCCAAGAAGTTTGCTTACAGGGAGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCTGAAACAGTGTTAATCCAAGAAGTTTGCTTACAGGGAGAAACT  100

seq1  CTGAGGTAGGACCTAACTCTCCTTTGTATTATTATTATTATTATTATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTAGGACCTAACTCTCCTTTGTATTATTATTATTATTATTATTAT  150

seq1  TATTATTATTATTATTATTATTGCCTATACATGACTGTAGAGTATGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATTGCCTATACATGACTGTAGAGTATGTTGC  200

seq1  AGAGATAAGTAGCCTCTCAAGAAAAATTATATATATATATATATATATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAAGTAGCCTCTCAAGAAAAATTATATATATATATATATATATAT  250

seq1  ATATATATATATATATATATATATATACACACACAATGATATCAGATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATACACACACAATGATATCAGATCAC  300

seq1  ATGTTACATGAATGTGTAAAATTCCATGAAGGCCCAGCCCTATATGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACATGAATGTGTAAAATTCCATGAAGGCCCAGCCCTATATGAAAG  350

seq1  ACAATTAATGGCTTTTGAGAAAGGGAGATTGGAACTTTTCTAATGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTAATGGCTTTTGAGAAAGGGAGATTGGAACTTTTCTAATGAGAAA  400

seq1  CCTCAAAAGGTTACCCAGAATCAAGTGCTCAGCTCAAACACACATGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAAGGTTACCCAGAATCAAGTGCTCAGCTCAAACACACATGTGTA  450

seq1  TGAGTATAGAAGATATTTTGAAGCGTTATAAAACTCAGAGAATTAACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATAGAAGATATTTTGAAGCGTTATAAAACTCAGAGAATTAACCTT  500

seq1  TGATTGATAAATTAAACCTCAGATAAGTGAAAAATATCCTTTCAGAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATAAATTAAACCTCAGATAAGTGAAAAATATCCTTTCAGAATTA  550

seq1  ACCTATATTTGTCCTAAAGATACATATTCATTTTATATTTTACTTGGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATATTTGTCCTAAAGATACATATTCATTTTATATTTTACTTGGAAC  600

seq1  ATGCTTGAAAAATGTAAGACTGTAACTATCTTAATTCAAAAAAATTCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGAAAAATGTAAGACTGTAACTATCTTAATTCAAAAAAATTCTAA  650

seq1  AATTTTTCCCTTCCAAAAAGTATGTTTAAGGGGGGAGGGGGAGG  694
      |||||||| |||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTCTTCCAAAAAGTATGTTTAAGGGGGGAGGGGGAGG  694