BAC Information

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BAC

Clone NameB6Ng01-298H15
Chromosome14 (Build37)
Map Location 4,101,967 - 4,103,135
singlet/doubletsinglet
Overlap geneLOC100041019
Upstream geneLOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012
Downstream geneENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298H15.bB6Ng01-298H15.g
ACCGA093572GA093573
length1,163639
definitionB6Ng01-298H15.b B6Ng01-298H15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagaggacacaactagtatttagaggagaaaggctttatcaca
cctcctcccccagtagattcctgtgtgacaccaaggaaacaccaggagca
aacttccctggtgatcactttggacctctatggactcaacactatcagga
cctgcaaactgtgcttcacacaaatcctcaggcccaatcaaaggtcccag
agccccagtcctgaacaaaacacacacacatctacattcacacacacaga
cacaattagaatgccaaataaatcctgtgaggtgccatctctcagaatat
tataaacaatatcagagtaaagccgtgatagcctgcaggcattgcattca
cacactgagagacagtaagtgtgagcaggtccttccagctgtttagagca
acaatcagattgcaagcaccccaaggtcaagtacaaaagaagatgataat
aaacacacagcaccttgtttatccaacaattaaacacctgtcagggctac
ctaattgaatgatgagagatgacacactccattcatggaaggaaattggg
gtaacagatggcagaatacagtcaatagggtactggtcataattcctacc
tgtagtttaaatcctcatacatgtaaacattcaggatttcacacatttcc
ttcctctcattgctgatcttccttatatgcaatttcagttcttctacttc
atttatatttgatatctgatttgtgatgttggaattttgggttgaagtat
ttctagcagaccctgcaggtagataaacacaaatgagtttgcatacttga
tggcccaggggaggggagaccattcagagtcccaagaagaagactgaggg
agagaacaggtaaagacagggtgaatcccataaaagagcagcaaagctat
cttctagctggtttgctaagctatgttcctcttcctaaccaccattgtca
gacatatgccacactccctgttacaggccccccttgcctgaaatctataa
gctgttctcaaacataagatatgggaacattgtaaggtcataccagatgt
gatgcaggcaatctggagttcatagtgcttagcactatcagcctagtatt
catgtgtcttcaatcaaggtgttctgaaactcacccattgacattgtcag
gggagcatccttg
gaattccttgtcttccttctatcaaagctgacactcctgtccccactcct
actgccatacctattcccacgaatacagccagggttaaagtaattggttc
tttttgaccgccgggcagcatagctttcttctaaactggatgcagggtga
taatatacgcggggtaacagctggatcatgacacaaaaatcatgagatga
attaaaaaccttagttgatacacagggagtaagtcctgtattgcaagtcc
accagccaaccagggaaggtacaagatagtaattagcttctgtcctggac
actgattgaatttgtccacataggtgtttgtgggtggaaggtggggtgcc
tatacagagacctggactcctcccggatacttcagtcagggtcagttttt
gtcctgttccccaagagcaggaagtatggctattggttctgttgaaatct
ccattgaaggcaattccttcataataaggaggacccgaggacaggcatag
ccagcagtcctcagtagtgcttggttcagttctattaagggcataaaagg
ctcctctcactaggttaaacatcctctgtcttgttgaagggattgtggag
gtaatagttagaggtacttgaagagtgggaggttgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4101967_4103135
seq2: B6Ng01-298H15.b_49_1211 (reverse)

seq1  CAAGGATGCTCCCCTGGCCATGTCATGTGTTGAGGTCTCAG-ACACTTTG  49
      |||||||||||||||| | ||||||   | ||| || |||| |||| |||
seq2  CAAGGATGCTCCCCTGACAATGTCAATGGGTGA-GTTTCAGAACACCTTG  49

seq1  GATTTGAAGACACATGATTAATTAGGGCTTGATAGTGCTAAGCACTATGA  99
         |||||||||||||| | | ||||   |||||||||||||||||||||
seq2  --ATTGAAGACACATGAAT-ACTAGG--CTGATAGTGCTAAGCACTATGA  94

seq1  ACTCCAGGATTTCCCTGCATCACATCTGGTATGACC-TACAATGTTCCCC  148
      |||||||   || ||||||||||||||||||||||| ||||||||| |||
seq2  ACTCCAG--ATTGCCTGCATCACATCTGGTATGACCTTACAATGTT-CCC  141

seq1  ATATCTTTATGTTTGAG-ACAGCTTATAGATTTCAGGGCAAGGGGGCCTG  197
      ||||| ||||||||||| |||||||||||||||||||  | |||||||||
seq2  ATATC-TTATGTTTGAGAACAGCTTATAGATTTCAGGCAAGGGGGGCCTG  190

seq1  TAACAGGGAGTGTGGCATATGTCTGACAATGGTGGTTAGGAAGAGGAACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGGAGTGTGGCATATGTCTGACAATGGTGGTTAGGAAGAGGAACA  240

seq1  TAGCTTAGCAAACCAGCTAGAAGATAGCTTTGCTGCTCTTTTAT-GGATT  296
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAGCTTAGCAAACCAGCTAGAAGATAGCTTTGCTGCTCTTTTATGGGATT  290

seq1  CACCCTGTCTTTACCTGTTCTCTCCCTCAGTCTTCTTCTTGGGACTCTGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGTCTTTACCTGTTCTCTCCCTCAGTCTTCTTCTTGGGACTCTGA  340

seq1  ATGGTCTCCCCTCCCCTGGGCCATCAAGTATGCAAACTCATTTGTGTTTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTCCCCTCCCCTGGGCCATCAAGTATGCAAACTCATTTGTGTTTA  390

seq1  TCTACCTGCAGGGTCTGCTAGAAATACTTCAACCCAAAATTCCAACATCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTGCAGGGTCTGCTAGAAATACTTCAACCCAAAATTCCAACATCA  440

seq1  CAAATCAGATATCAAATATAAATGAAGTAGAAGAACTGAAATTGCATATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAGATATCAAATATAAATGAAGTAGAAGAACTGAAATTGCATATA  490

seq1  AGGAAGATCAGCAATGAGAGGAAGGAAATGTGTGAAATCCTGAATGTTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATCAGCAATGAGAGGAAGGAAATGTGTGAAATCCTGAATGTTTA  540

seq1  CATGTATGAGGATTTAAACTACAGGTAGGAATTATGACCAGTACCCTATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATGAGGATTTAAACTACAGGTAGGAATTATGACCAGTACCCTATT  590

seq1  GACTGTATTCTGCCATCTGTTACCCCAATTTCCTTCCATGAATGGAGTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATTCTGCCATCTGTTACCCCAATTTCCTTCCATGAATGGAGTGT  640

seq1  GTCATCTCTCATCATTCAATTAGGTAGCCCTGACAGGTGTTTAATTGTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTCTCATCATTCAATTAGGTAGCCCTGACAGGTGTTTAATTGTTG  690

seq1  GATAAACAAGGTGCTGTGTGTTTATTATCATCTTCTTTTGTACTTGACCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACAAGGTGCTGTGTGTTTATTATCATCTTCTTTTGTACTTGACCT  740

seq1  TGGGGTGCTTGCAATCTGATTGTTGCTCTAAACAGCTGGAAGGACCTGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGCTTGCAATCTGATTGTTGCTCTAAACAGCTGGAAGGACCTGCT  790

seq1  CACACTTACTGTCTCTCAGTGTGTGAATGCAATGCCTGCAGGCTATCACG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTACTGTCTCTCAGTGTGTGAATGCAATGCCTGCAGGCTATCACG  840

seq1  GCTTTACTCTGATATTGTTTATAATATTCTGAGAGATGGCACCTCACAGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACTCTGATATTGTTTATAATATTCTGAGAGATGGCACCTCACAGG  890

seq1  ATTTATTTGGCATTCTAATTGTGTCTGTGTGTGTGAATGTAGATGTGTGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTGGCATTCTAATTGTGTCTGTGTGTGTGAATGTAGATGTGTGT  940

seq1  GTGTTTTGTTCAGGACTGGGGCTCTGGGACCTTTGATTGGGCCTGAGGAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGTTCAGGACTGGGGCTCTGGGACCTTTGATTGGGCCTGAGGAT  990

seq1  TTGTGTGAAGCACAGTTTGCAGGTCCTGATAGTGTTGAGTCCATAGAGGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGAAGCACAGTTTGCAGGTCCTGATAGTGTTGAGTCCATAGAGGT  1040

seq1  CCAAAGTGATCACCAGGGAAGTTTGCTCCTGGTGTTTCCTTGGTGTCACA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTGATCACCAGGGAAGTTTGCTCCTGGTGTTTCCTTGGTGTCACA  1090

seq1  CAGGAATCTACTGGGGGAGGAGGTGTGATAAAGCCTTTCTCCTCTAAATA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCTACTGGGGGAGGAGGTGTGATAAAGCCTTTCTCCTCTAAATA  1140

seq1  CTAGTTGTGTCCTCTGGGAATTC  1169
      |||||||||||||||||||||||
seq2  CTAGTTGTGTCCTCTGGGAATTC  1163