BAC Information

Click to search

BAC

Clone NameB6Ng01-299H22
Chromosome14 (Build37)
Map Location 3,832,052 - 3,833,144
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040452, LOC100040657, LOC100040671, LOC100040682, LOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621
Downstream geneLOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299H22.bB6Ng01-299H22.g
ACCGA094320GA094321
length1,0971,208
definitionB6Ng01-299H22.b B6Ng01-299H22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagttttgagccccatttttaatggggttatttgatct
tctggagtccaccttcttgagttctttagatatacattggatattagtcc
cctatctgatttaggggcaagtggaaatttttaaacagtgcagacgggta
agtgataaccaagactaagcagagaagaaaaagctccatggaaccatact
gtgctttaattcatgtaataactgtttgagggtccagttaaatggtacaa
tgggtaaatgtgccactcgccaaacatgattacttgagattgatcttggg
tccacatggtagaagaaccaaatcctgaaataatcctccagcctcagcac
ttgttgaccctgcaagttactacctgcctggaaagatatgcttctcattg
ctacatagcatgattattgtaggcgctattaactgctttgtatatggatt
tgaaaagttagcaagcaatgcctcaccagtgatttagattaagagctggt
gactgaggaaatctgtggttgtggtgattgaatatgagaatctctctaat
tctaaaagattggaacttttgctggatatcaattgtacttgtattctaat
gattaagaagaaatagaagttactgtaaactctgactttcattttgtaaa
tttctatacttgcatacattttatatgtctgtatactaaaatttatgcaa
atcacaaactagaaataaaatatcaatgttttttaatgagaattcagtta
caatccctttgggttgcattttgctcaaaggcataagaataaaaagaagg
atgcaacttttagaataagtataaccttctcaagcataacccagtattaa
cccatgaagggctgacattctcctgttggaataagtgctttaacagtgag
ctgcatcttcaactctaaaatctaatgccatttttcaaccactattagca
aatttatagtacttcaatagaaatccatactaaccatattaagaaacact
agcatcttctctttttgatcacagcaaaggttgtaaattctaataattat
agatgccaagttgacatgaaaactaaaggtggatcctagccacacta
gaattcctgatctttccaaaacttttatcacgaatgtgtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccccgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttatcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatcttttttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtaccaggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactccctcgtttggttaattctttg
aataggaggaaattagtcttgaacaggtgagagggtgcgctcagagaacc
tgacagctttctggaacaggcagaaagcacaggaggcgcttgaggcagca
ccctgtgtggcccggggacagcccagccacctttcggaccataggacagt
tgccccgcccgggctggggaagccgcctaagcacagcagcagccggttcg
ccatctttggtccgggacctcctccgaacttagggaatttattctgaaca
ggtggaggagggtggcgccagtaccttgaacagtcttctgggactaagga
gagccacggagggtcttgatgccatgccacctgtgtaggactgagtaacg
acgagtctcaatcgtttctcggtctcggagaagggtaacactgaggaggt
attgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_3832052_3833144
seq2: B6Ng01-299H22.b_49_1145

seq1  GAATTCTTTGTTTAGTTTTGAGCCCCATTTTTAATGGGGTTATTTGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGTTTTGAGCCCCATTTTTAATGGGGTTATTTGATCT  50

seq1  TCTGGAGTCCACCTTCTTGAGTTCTTTAGATATACATTGGATATTAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCACCTTCTTGAGTTCTTTAGATATACATTGGATATTAGTCC  100

seq1  CCTATCTGATTTAGGGGCAAGTGGAAATTTTTAAACAGTGCAGACGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTGATTTAGGGGCAAGTGGAAATTTTTAAACAGTGCAGACGGGTA  150

seq1  AGTGATAACCAAGACTAAGCAGAGAAGAAAAAGCTCCATGGAACCATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAACCAAGACTAAGCAGAGAAGAAAAAGCTCCATGGAACCATACT  200

seq1  GTGCTTTAATTCATGTAATAACTGTTTGAGGGTCCAGTTAAATGGTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTAATTCATGTAATAACTGTTTGAGGGTCCAGTTAAATGGTACAA  250

seq1  TGGGTAAATGTGCCACTCGCCAAACATGATTACTTGAGATTGATCTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAATGTGCCACTCGCCAAACATGATTACTTGAGATTGATCTTGGG  300

seq1  TCCACATGGTAGAAGAACCAAATCCTGAAATAATCCTCCAGCCTCAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGGTAGAAGAACCAAATCCTGAAATAATCCTCCAGCCTCAGCAC  350

seq1  TTGTTGACCCTGCAAGTTACTACCTGCCTGGAAAGATATGCTTCTCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGACCCTGCAAGTTACTACCTGCCTGGAAAGATATGCTTCTCATTG  400

seq1  CTACATAGCATGATTATTGTAGGCGCTATTAACTGCTTTGTATATGGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGCATGATTATTGTAGGCGCTATTAACTGCTTTGTATATGGATT  450

seq1  TGAAAAGTTAGCAAGCAATGCCTCACCAGTGATTTAGATTAAGAGCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTTAGCAAGCAATGCCTCACCAGTGATTTAGATTAAGAGCTGGT  500

seq1  GACTGAGGAAATCTGTGGTTGTGGTGATTGAATATGAGAATCTCTCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGAAATCTGTGGTTGTGGTGATTGAATATGAGAATCTCTCTAAT  550

seq1  TCTAAAAGATTGGAACTTTTGCTGGATATCAATTGTACTTGTATTCTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGATTGGAACTTTTGCTGGATATCAATTGTACTTGTATTCTAAT  600

seq1  GATTAAGAAGAAATAGAAGTTACTGTAAACTCTGACTTTCATTTTGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGAAGAAATAGAAGTTACTGTAAACTCTGACTTTCATTTTGTAAA  650

seq1  TTTCTATACTTGCATACATTTTATATGTCTGTATACTAAAATTTATGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATACTTGCATACATTTTATATGTCTGTATACTAAAATTTATGCAA  700

seq1  ATCACAAACTAGAAATAAAATATCAATGTTTTTTAATGAGAATTCAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAACTAGAAATAAAATATCAATGTTTTTTAATGAGAATTCAGTTA  750

seq1  CAATCCCTTTGGGTTGCATTTTGCTCAAAGGCATAAGAATAAAAAGAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCTTTGGGTTGCATTTTGCTCAAAGGCATAAGAATAAAAAGAAGG  800

seq1  ATGCAACTTTTAGAATAAGTATAACCTTCTCAAGCATAA-CCAGTATTAA  849
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATGCAACTTTTAGAATAAGTATAACCTTCTCAAGCATAACCCAGTATTAA  850

seq1  CCCATGAA-GGCTGACATTCTCCTGTTGGAATAAGTGCTTTAACAGTGAG  898
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAAGGGCTGACATTCTCCTGTTGGAATAAGTGCTTTAACAGTGAG  900

seq1  CTGCATCTTCAACTCTAAAATCTAATGCCA-TTTTCAACCACTATTAGCA  947
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGCATCTTCAACTCTAAAATCTAATGCCATTTTTCAACCACTATTAGCA  950

seq1  AATTTATAGTACTTCAATAGAAATCCATACTAACCATATTAAGAAACACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATAGTACTTCAATAGAAATCCATACTAACCATATTAAGAAACACT  1000

seq1  AGCATC-TCTC-TTTTGATCAACAGCAAAGGGTTGTAAATTCTAATAATT  1045
      |||||| |||| |||||||| |||||||| ||||||||||||||||||||
seq2  AGCATCTTCTCTTTTTGATC-ACAGCAAA-GGTTGTAAATTCTAATAATT  1048

seq1  ATAGATGCAAAG-TGACATGAAAACTAAAGGTGGATCCCTAG-CACACTA  1093
      |||||||| ||| ||||||||||||||||||||||| ||||| |||||||
seq2  ATAGATGCCAAGTTGACATGAAAACTAAAGGTGGAT-CCTAGCCACACTA  1097