BAC Information

Click to search

BAC

Clone NameB6Ng01-303N22
Chromosome14 (Build37)
Map Location 22,438,936 - 22,506,514
singlet/doubletdoublet
Overlap geneMyst4, EG435391
Upstream geneMyoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
Downstream geneDusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075, EG435392
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303N22.bB6Ng01-303N22.g
ACCGA097564GA097565
length1,1641,144
definitionB6Ng01-303N22.b B6Ng01-303N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,505,345 - 22,506,514)(22,438,936 - 22,440,086)
sequence
gaattctatctaatcccaacaaaatcctctgaaacaccgatttgaagcat
tttccccagctatgacctccaaacccattaatgtttggaagctacagaac
aggggcctcttttaaaggttctcccaggggctctgtgaagcaggctcaga
ggaacagattgtgtttcagttgcctttggggagatctgacaggtccacct
ccaggacctgcagcgtaaggtgaatgatccaaagggaaagggcaaatgcc
cagactgcgcctacccagggctgggcagatggtagctttcttatagtcat
gaaaccaaacggtgcccagtggcctggggctcgggaagagcgctgctttg
ggtctttgcctgtaatctccctgcgattactgggtccagcgttgaaagcc
gtgcaccacccaaagcgcggcgtccaccaaccgaccgacccttctccctg
cgcccagggccacggcgctggaccgctatgggctgcagaaggcgggtttc
acgcacgtgctgaacgcggcgcacggccgctggaatgtggacaccgggcc
ggactactaccgagacatggccatcgagtaccacggcgtcgaggccgacg
acgtgcccaccttcgacctcagcatctttttctactccgctgcggccttc
atcgactcggcactccgagatgaccacagtaagtgaccctctccaactct
gccctgacaaggccccgcccccaggctgaaaacccacccatcaggtcccg
ctcccagacataaaacacgcccccccctccccgccagccgaggcaccacc
cctcccgcccacagtgtgctttccccctgctaggtcatgccccaaggcat
gctatcctctcccctctggggagaggtcctgccctcatattccctcccca
ggatcttccaacccggccctgccccagtggatcagaagcaggatctacaa
gaaagtgattctcaacctggtgtaccggggctgagattgaaggcagggat
tggctgagctaactgctgccatgtgtgtgctggtggggttcggctgatta
tacaggtgtgaagataggaaaaggggaggctagaggaggcttgtgctgat
ctcatctcatgaagaccagcaccctaaagactagggtgaagtccggggtt
ggattacaatgggg
gaattctctgtatctggtgtaatatggagttctcttctctgtttgtgtga
gtcagccatgtacctgccctcatgtttataatatggtaaacatttaagaa
tgagcttgcccttttattaatagtatgtatatattgacattgtagaaggt
atagagaatacaaacataaaagaaatataaaggctgggggacaaacagtt
agttaccaagaggttcttgcttctactcgcccttttcaagggagcgttct
gcaaatgtgtgcgtaaccttgagttttcctcttcccaataatagatggta
agcatcctcatgccattgctcgccctcctaaacatgattttacacaagtc
atgttgagcaccataacacggagcagggcttccagacctgcttgtgggcc
atgaataagctttgttggcacgatccttttcaattttaccttgagttgtc
tcaatggggcatgcatgctttgatttgtcaccctgtcactgctccctatt
gtcacgtgttctaatttgctttagtcacatgcagtcgaggtgcttcctga
aggtatttgattttgcagcctcaggtataaatgaaccataattgatttaa
ttaaccaattctctacagtagatacttcaagtgtttcccttacacctgaa
gataaattcgtagagaggaattctctaactagaggccacttacttgaaag
gctgtcagtttttataccgaccaccagtgtatgaggaattatcctcatga
caaagctaatagaaccactgagccaaagacatacttccttttttaccttt
taacatctttaaaataatttttatcatatgagtaatatcttagatttgat
aaaactatagtcttaatattttaaatcagtttgatagtaaggaaaaaaat
catgacttcttttccctttttttagttgaggacaccgaacttctgtattt
gattattttattcgcatcattgtgaatacctgtttttaatactataatca
ttttccattgaggtcagtactacacgtcagcttacagaaaatatttaatc
agtttagatctatgtttgccacatttttattttcatgtagattctttgcc
ctcagtaagtgaatccggttcccacccggtgaaattacatttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22505345_22506514
seq2: B6Ng01-303N22.b_47_1210 (reverse)

seq1  CCCCA---TGATCC-ACCCCGG--CTCACCCTGGTCTTTTTAGGGGTGCT  44
      |||||   | |||| |||||||   ||||||| ||||||    |||||| 
seq2  CCCCATTGTAATCCAACCCCGGACTTCACCCTAGTCTTT---AGGGTGC-  46

seq1  TGTTCCTCATGAGATGGAGACTCAGCCACAAGCCTCCTCTAAGCCTCCCC  94
      || || ||||||||| |||| |||| |||||||||||||| |||||||||
seq2  TGGTCTTCATGAGAT-GAGA-TCAG-CACAAGCCTCCTCT-AGCCTCCCC  92

seq1  CTTTCCTATCTCAACA-CTGTATATCAAGCCCGAACCCCACCAGCAACAC  143
       ||||||||||  ||| |||||||   || ||||||||||||||| ||||
seq2  TTTTCCTATCTTCACACCTGTATAATCAG-CCGAACCCCACCAGC-ACAC  140

seq1  ACATGGCCAGGCAGTTAGCTCAGCCAATCCCTGCCTTCAATCCTCAGCCC  193
      |||||||   ||||||||||||||||||||||||||||||| ||||||||
seq2  ACATGGC--AGCAGTTAGCTCAGCCAATCCCTGCCTTCAAT-CTCAGCCC  187

seq1  CGGTACACCAGGTTTGAGAATCACTTTCTTGTAGATCCTGCTTCTGATCC  243
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGGTACACCAGG-TTGAGAATCACTTTCTTGTAGATCCTGCTTCTGATCC  236

seq1  ACTGGGGCAGGGCCGGGTTGGAAGATCCTGGGGAGGGAATATGAGGGCAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCAGGGCCGGGTTGGAAGATCCTGGGGAGGGAATATGAGGGCAG  286

seq1  GACCTCTCCCCAGAGGGGAGAGGATAGCATGCCTTGGGGCATGACCTAGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTCCCCAGAGGGGAGAGGATAGCATGCCTTGGGGCATGACCTAGC  336

seq1  AGGGGGAAAGCACACTGTGGGCGGGAGGGGTGGTGCCTCGGCTGGCGGGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAAGCACACTGTGGGCGGGAGGGGTGGTGCCTCGGCTGGCGGGG  386

seq1  A-GGGGGGGCGTGTTTTATGTCTGGGAGCGGGACCTGATGGGTGGGTTTT  442
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGGGCGTGTTTTATGTCTGGGAGCGGGACCTGATGGGTGGGTTTT  436

seq1  CAGCCTGGGGGCGGGGCCTTGTCAGGGCAGAGTTGGAGAGGGTCACTTAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGGGGCGGGGCCTTGTCAGGGCAGAGTTGGAGAGGGTCACTTAC  486

seq1  TGTGGTCATCTCGGAGTGCCGAGTCGATGAAGGCCGCAGCGGAGTAGAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCATCTCGGAGTGCCGAGTCGATGAAGGCCGCAGCGGAGTAGAAA  536

seq1  AAGATGCTGAGGTCGAAGGTGGGCACGTCGTCGGCCTCGACGCCGTGGTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTGAGGTCGAAGGTGGGCACGTCGTCGGCCTCGACGCCGTGGTA  586

seq1  CTCGATGGCCATGTCTCGGTAGTAGTCCGGCCCGGTGTCCACATTCCAGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGATGGCCATGTCTCGGTAGTAGTCCGGCCCGGTGTCCACATTCCAGC  636

seq1  GGCCGTGCGCCGCGTTCAGCACGTGCGTGAAACCCGCCTTCTGCAGCCCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGTGCGCCGCGTTCAGCACGTGCGTGAAACCCGCCTTCTGCAGCCCA  686

seq1  TAGCGGTCCAGCGCCGTGGCCCTGGGCGCAGGGAGAAGGGTCGGTCGGTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGGTCCAGCGCCGTGGCCCTGGGCGCAGGGAGAAGGGTCGGTCGGTT  736

seq1  GGTGGACGCCGCGCTTTGGGTGGTGCACGGCTTTCAACGCTGGACCCAGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGACGCCGCGCTTTGGGTGGTGCACGGCTTTCAACGCTGGACCCAGT  786

seq1  AATCGCAGGGAGATTACAGGCAAAGACCCAAAGCAGCGCTCTTCCCGAGC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCAGGGAGATTACAGGCAAAGACCCAAAGCAGCGCTCTTCCCGAGC  836

seq1  CCCAGGCCACTGGGCACCGTTTGGTTTCATGACTATAAGAAAGCTACCAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCCACTGGGCACCGTTTGGTTTCATGACTATAAGAAAGCTACCAT  886

seq1  CTGCCCAGCCCTGGGTAGGCGCAGTCTGGGCATTTGCCCTTTCCCTTTGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAGCCCTGGGTAGGCGCAGTCTGGGCATTTGCCCTTTCCCTTTGG  936

seq1  ATCATTCACCTTACGCTGCAGGTCCTGGAGGTGGACCTGTCAGATCTCCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCACCTTACGCTGCAGGTCCTGGAGGTGGACCTGTCAGATCTCCC  986

seq1  CAAAGGCAACTGAAACACAATCTGTTCCTCTGAGCCTGCTTCACAGAGCC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCAACTGAAACACAATCTGTTCCTCTGAGCCTGCTTCACAGAGCC  1036

seq1  CCTGGGAGAACCTTTAAAAGAGGCCCCTGTTCTGTAGCTTCCAAACATTA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGAACCTTTAAAAGAGGCCCCTGTTCTGTAGCTTCCAAACATTA  1086

seq1  ATGGGTTTGGAGGTCATAGCTGGGGAAAATGCTTCAAATCGGTGTTTCAG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTTGGAGGTCATAGCTGGGGAAAATGCTTCAAATCGGTGTTTCAG  1136

seq1  AGGATTTTGTTGGGATTAGATAGAATTC  1170
      ||||||||||||||||||||||||||||
seq2  AGGATTTTGTTGGGATTAGATAGAATTC  1164

seq1: chr14_22438936_22440086
seq2: B6Ng01-303N22.g_65_1208

seq1  GAATTCTCTGTATCTGGTGTAATATGGAGTTCTCTTCTCTGTTTGTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTATCTGGTGTAATATGGAGTTCTCTTCTCTGTTTGTGTGA  50

seq1  GTCAGCCATGTACCTGCCCTCATGTTTATAATATGGTAAACATTTAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCATGTACCTGCCCTCATGTTTATAATATGGTAAACATTTAAGAA  100

seq1  TGAGCTTGCCCTTTTATTAATAGTATGTATATATTGACATTGTAGAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTGCCCTTTTATTAATAGTATGTATATATTGACATTGTAGAAGGT  150

seq1  ATAGAGAATACAAACATAAAAGAAATATAAAGGCTGGGGGACAAACAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAATACAAACATAAAAGAAATATAAAGGCTGGGGGACAAACAGTT  200

seq1  AGTTACCAAGAGGTTCTTGCTTCTACTCGCCCTTTTCAAGGGAGCGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCAAGAGGTTCTTGCTTCTACTCGCCCTTTTCAAGGGAGCGTTCT  250

seq1  GCAAATGTGTGCGTAACCTTGAGTTTTCCTCTTCCCAATAATAGATGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTGTGCGTAACCTTGAGTTTTCCTCTTCCCAATAATAGATGGTA  300

seq1  AGCATCCTCATGCCATTGCTCGCCCTCCTAAACATGATTTTACACAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTCATGCCATTGCTCGCCCTCCTAAACATGATTTTACACAAGTC  350

seq1  ATGTTGAGCACCATAACACGGAGCAGGGCTTCCAGACCTGCTTGTGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAGCACCATAACACGGAGCAGGGCTTCCAGACCTGCTTGTGGGCC  400

seq1  ATGAATAAGCTTTGTTGGCACGATCCTTTTCAATTTTACCTTGAGTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAAGCTTTGTTGGCACGATCCTTTTCAATTTTACCTTGAGTTGTC  450

seq1  TCAATGGGGCATGCATGCTTTGATTTGTCACCCTGTCACTGCTCCCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGGGCATGCATGCTTTGATTTGTCACCCTGTCACTGCTCCCTATT  500

seq1  GTCACGTGTTCTAATTTGCTTTAGTCACATGCAGTCGAGGTGCTTCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGTGTTCTAATTTGCTTTAGTCACATGCAGTCGAGGTGCTTCCTGA  550

seq1  AGGTATTTGATTTTGCAGCCTCAGGTATAAATGAACCATAATTGATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTGATTTTGCAGCCTCAGGTATAAATGAACCATAATTGATTTAA  600

seq1  TTAACCAATTCTCTACAGTAGATACTTCAAGTGTTTCCCTTACACCTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAATTCTCTACAGTAGATACTTCAAGTGTTTCCCTTACACCTGAA  650

seq1  GATAAATTCGTAGAGAGGAATTCTCTAACTAGAGGCCACTTACTTGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATTCGTAGAGAGGAATTCTCTAACTAGAGGCCACTTACTTGAAAG  700

seq1  GCTGTCAGTTTTTATACCGACCACCAGTGTATGAGGAATTATCCTCATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGTTTTTATACCGACCACCAGTGTATGAGGAATTATCCTCATGA  750

seq1  CAAAGCTAATAGAACCACTGAGCCAAAGACATACTTCCTTTTTTACCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAATAGAACCACTGAGCCAAAGACATACTTCCTTTTTTACCTTT  800

seq1  TAACATCTTTAAAATAATTTTTATCATATGAGTAATATCTTAGATTTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCTTTAAAATAATTTTTATCATATGAGTAATATCTTAGATTTGAT  850

seq1  AAAACTATAGTCTTAATATTTTAAATCAGTTTGATAGTAAGGAAAAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATAGTCTTAATATTTTAAATCAGTTTGATAGTAAGGAAAAAAAT  900

seq1  CATGACTTCTTTTCCCTTTTTTTAGTTGAGGACACCGAACTTCTGTATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTTCTTTTCCCTTTTTTTAGTTGAGGACACCGAACTTCTGTATTT  950

seq1  GATTA-TTTATTCGCATCATTGTGAATACCTGTTTT--ATACTATAATCA  997
      ||||| ||||||||||||||||||||||||||||||  ||||||||||||
seq2  GATTATTTTATTCGCATCATTGTGAATACCTGTTTTTAATACTATAATCA  1000

seq1  TTTTTCCATTGAGGTTCAAGTACTTACACCTTCAGCTTTACAG-AAATA-  1045
       ||||||||||||||   ||||| |||| | ||||| |||||| ||||| 
seq2  -TTTTCCATTGAGGT--CAGTAC-TACA-CGTCAGC-TTACAGAAAATAT  1044

seq1  TTAATCAGTTTAGATTCCTGGTGTTTGCCACATTTTATTTTTCATGTAGG  1095
      |||||||||||||||  ||  |||||||||||||||  |||||||||| |
seq2  TTAATCAGTTTAGAT--CT-ATGTTTGCCACATTTTTATTTTCATGTA-G  1090

seq1  ATTCTTTG-CCTCAGTTTATGTGATTTCTGTCCCCACCCCGTGGAAATTA  1144
      |||||||| ||||||  || |||| | | || ||||||| || |||||||
seq2  ATTCTTTGCCCTCAG--TAAGTGAATCCGGTTCCCACCCGGT-GAAATTA  1137

seq1  CATTTTA  1151
      |||||||
seq2  CATTTTA  1144