BAC Information

Click to search

BAC

Clone NameB6Ng01-304C21
Chromosome14 (Build37)
Map Location 25,593,329 - 25,594,497
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnma1, LOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315
Downstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304C21.bB6Ng01-304C21.g
ACCGA097799GA097800
length1,2321,171
definitionB6Ng01-304C21.b B6Ng01-304C21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctatattccaggaaagtctttcatcagacacatggtggttt
gtgcacagttcctcttggtcgtagcttgtctttccctcttcccaatagga
tcggtggcagaggaaacacatttgatgatccaggatggtgatgctcagat
tacaagttttactttcatggctcacatgttggtgtccattccagaaattc
tgcacacagctaaatcctgggtgctttgcagaagttacatagttagcatt
tacaaaatccatttggagttgaattttatatatggtatgacatttatact
tgtgttcattattttaactatgactagccagccattctaatacctttcac
tgaaaattctccattaagttacctccacatcactgtcaaatgctagtgag
gcacatttgtttgggtctacttctgtaatctctagtctatctattgatct
attattgtctgagtctccactggtaccacattgcctttatcactgcagtt
acatttagactgaaataaggcataggattatttagcctactttattcctt
catcaagatcatttaacaagttgtagcctgtactttataaacaccatttt
gatcagaattgcattaaacttgtagattcatgtatagagatggctagcat
cttcacaatgttaaatgtcctaatctgtgaaaatagtgcatgtccccatt
taatcaagttttccttgttttatgtaaaacatatattaattacaaatttg
gccctacacacattttcttgatttttatattcaaatattccattttaggg
gggtgattatgagtgccatcatgcttcttatttttgttacagatgccttg
tgcttctacacagacatgaggtccactttgtatatcctgatttttcatcc
tataactttgatcaactcctatcttaactttttttctctttgtcctgcga
gatggattccttagaattttatacatgtagaatcatgacatctatataga
aagcagacctaaatgactttttgtttctttttccctcacttttacaatgg
accacattttccaaccaatacaatgagtgagagtgttaagactagcagct
ttgctgctttcgaaggtggaaagccgtagagcctggtctgtcagcttgct
cttagtgtaaggtctgcaatgttcttaattgaggtgagaaaggtctcctt
gttccagagtttactactataacaacgtagtc
gaattctttcatgaccacccctgtctctccatgaaccccagaagataagt
tggactctcaggccacttgagacttctccacagcagcatgcacgcttgta
atcactggctcatctgttggccgtggtttgtgttctgacctgcagggtag
tgagaatgggctttgctttccccagcctcctgggtgcttagcatagctgg
ggtgctcagcatatgcctggatgatgactcgggaccaaacaggaagggag
gcacccaaggaagggacctttgagaagccactcctgtgagtatatcctta
caacaaccttgtgaataggaatagcatatctccaagtcattccagagctt
gaagcgtccaggtggtagctcacatcgagtagagactctccatcaactgt
cccccttcctgcctccctgccatgcattctccttgttgcaataggtagct
ggaaagttgttgggggctgcagtttttctttcgctggtgtttctttggag
ttcatatctggactcttgtgttggctagtttttatgtcaaattgatacaa
actggagtcatctgggaagaagaaatcttaacctagaaaatacctctata
ttatagatcctatacagtctataagatcagcctataggcaagactgtaag
ccatttccatgaccgataaggtataggaaagcaggctgagcaagccatgt
tgagcaagccagtaaatagcattcatccatggcctcttgcctccaggttc
ctgcctggagttcctgccccaactccccgcagtaatagggagtcctggga
gtcctttctcctcagcttgctttggtttttcttaccaccagaacagaaac
cctaagacagctcctctcatgaagcaaaatgaatcatgtgaccagaaaga
tttgtatggatttattctgttctgttcccggcataatcaacatgtagact
gtgcactttataaagaacagaagttatttcactcatgggcatgctgagga
cagaggcaggctctgatctaacatctggccagagctcctgatgtatccaa
acatggtagaagggcatcacatggccagaaagaaacctgttgcctaagct
agagtatctcttctctcccctttctaagaatccactatgcatcgtggggc
cattccttggtgacctggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25593329_25594497
seq2: B6Ng01-304C21.g_69_1239

seq1  GAATTCTTTCATGACCACCCCTGTCTCTCCATGAACCCCAGAAGATAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATGACCACCCCTGTCTCTCCATGAACCCCAGAAGATAAGT  50

seq1  TGGACTCTCAGGCCACTTGAGACTTCTCCACAGCAGCATGCACGCTTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCTCAGGCCACTTGAGACTTCTCCACAGCAGCATGCACGCTTGTA  100

seq1  ATCACTGGCTCATCTGTTGGCCGTGGTTTGTGTTCTGACCTGCAGGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGGCTCATCTGTTGGCCGTGGTTTGTGTTCTGACCTGCAGGGTAG  150

seq1  TGAGAATGGGCTTTGCTTTCCCCAGCCTCCTGGGTGCTTAGCATAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGGGCTTTGCTTTCCCCAGCCTCCTGGGTGCTTAGCATAGCTGG  200

seq1  GGTGCTCAGCATATGCCTGGATGATGACTCGGGACCAAACAGGAAGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCAGCATATGCCTGGATGATGACTCGGGACCAAACAGGAAGGGAG  250

seq1  GCACCCAAGGAAGGGACCTTTGAGAAGCCACTCCTGTGAGTATATCCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCAAGGAAGGGACCTTTGAGAAGCCACTCCTGTGAGTATATCCTTA  300

seq1  CAACAACCTTGTGAATAGGAATAGCATATCTCCAAGTCATTCCAGAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACCTTGTGAATAGGAATAGCATATCTCCAAGTCATTCCAGAGCTT  350

seq1  GAAGCGTCCAGGTGGTAGCTCACATCGAGTAGAGACTCTCCATCAACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGTCCAGGTGGTAGCTCACATCGAGTAGAGACTCTCCATCAACTGT  400

seq1  CCCCCTTCCTGCCTCCCTGCCATGCATTCTCCTTGTTGCAATAGGTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTCCTGCCTCCCTGCCATGCATTCTCCTTGTTGCAATAGGTAGCT  450

seq1  GGAAAGTTGTTGGGGGCTGCAGTTTTTCTTTCGCTGGTGTTTCTTTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTTGTTGGGGGCTGCAGTTTTTCTTTCGCTGGTGTTTCTTTGGAG  500

seq1  TTCATATCTGGACTCTTGTGTTGGCTAGTTTTTATGTCAAATTGATACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATCTGGACTCTTGTGTTGGCTAGTTTTTATGTCAAATTGATACAA  550

seq1  ACTGGAGTCATCTGGGAAGAAGAAATCTTAACCTAGAAAATACCTCTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGTCATCTGGGAAGAAGAAATCTTAACCTAGAAAATACCTCTATA  600

seq1  TTATAGATCCTATACAGTCTATAAGATCAGCCTATAGGCAAGACTGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGATCCTATACAGTCTATAAGATCAGCCTATAGGCAAGACTGTAAG  650

seq1  CCATTTCCATGACCGATAAGGTATAGGAAAGCAGGCTGAGCAAGCCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCATGACCGATAAGGTATAGGAAAGCAGGCTGAGCAAGCCATGT  700

seq1  TGAGCAAGCCAGTAAATAGCATTCATCCATGGCCTCTTGCCTCCAGGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGCCAGTAAATAGCATTCATCCATGGCCTCTTGCCTCCAGGTTC  750

seq1  CTGCCTGGAGTTCCTGCCCCAACTCCCCGCAGTAATAGGGAGTCCTGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGAGTTCCTGCCCCAACTCCCCGCAGTAATAGGGAGTCCTGGGA  800

seq1  GTCCTTTCTCCTCAGCTTGCTTTGGTTTTTCTTACCACCAGAACAGAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTCTCCTCAGCTTGCTTTGGTTTTTCTTACCACCAGAACAGAAAC  850

seq1  CCTAAGACAGCTCCTCTCATGAAGCAAAATGAATCATGTGACCAGAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGACAGCTCCTCTCATGAAGCAAAATGAATCATGTGACCAGAAAGA  900

seq1  TTTGTATGGATTTATTCTGTTCTGTT-CCGGCATAATCAACATGTAGACT  949
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTGTATGGATTTATTCTGTTCTGTTCCCGGCATAATCAACATGTAGACT  950

seq1  GTGCACTTTATAAAGAACAGAAGGTTATTTCACTCATGGGCATGCTGAGG  999
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTGCACTTTATAAAGAACAGAA-GTTATTTCACTCATGGGCATGCTGAGG  999

seq1  ACAGGAGGCAGGCTTCTGATCT-ACATCTGGCCAGAGCTTCCTGATGTAT  1048
      ||| ||||||||| |||||||| ||||||||||||||| |||||||||||
seq2  ACA-GAGGCAGGC-TCTGATCTAACATCTGGCCAGAGC-TCCTGATGTAT  1046

seq1  CCAAACATGGTAG-AGGGCATCACATGGCCAGACAG-AACCTGTTGC--T  1094
      ||||||||||||| ||||||||||||||||||| || ||||||||||   
seq2  CCAAACATGGTAGAAGGGCATCACATGGCCAGAAAGAAACCTGTTGCCTA  1096

seq1  AGCTAGAGTATC---TCTCTCCCCTTCCTAGGATCACACTAATGCCATCG  1141
      ||||||||||||   ||||||||||| ||| ||   |||| ||| |||||
seq2  AGCTAGAGTATCTCTTCTCTCCCCTTTCTAAGAATCCACT-ATG-CATCG  1144

seq1  TGGGGGCCCTTCCTTGGTGACCTGGCTA  1169
      | |||||| |||||||||||||||||||
seq2  T-GGGGCCATTCCTTGGTGACCTGGCTA  1171