BAC Information

Click to search

BAC

Clone NameB6Ng01-304F05
Chromosome14 (Build37)
Map Location 66,608,299 - 66,745,684
singlet/doubletdoublet
Overlap geneGulo, Adam2, LOC100043675, Ephx2
Upstream geneD14Ertd231e, Extl3, Fzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu
Downstream geneChrna2, Ptk2b, LOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304F05.bB6Ng01-304F05.g
ACCGA097911GA097912
length1,148612
definitionB6Ng01-304F05.b B6Ng01-304F05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,744,560 - 66,745,684)(66,608,299 - 66,608,910)
sequence
gaattccatttttcgtagccatgtttttcttctttgctttgtaactgtta
tacacatattcatttggcctcagcaacactctacctgtcagaatgtagag
gtgtgcaacagaaaccacgtttgctttttcaaacccatgatgtattaact
atgagtaattgggaggtgtgttaaatattgataattgtcagaagtattaa
atatgggtgatgaaacagacatataaagtatgagtcatgaggtagaccaa
caaaatctctgaaaggatttgtttccaggcagccaaacctttaagaaaga
aacaccaccagggatctagaagctgctacctctgccccagtcagctgact
gggaaccaagtcagagcatgtggctcagtgggcagccaggggtaagcaac
tctaaggtctttggatggagtagctgggccaaggtttgtgttaagtagta
acataggaatctcctgtttgggggccaactgtctactatcataacaatac
caaaggttattagcttagagaaggaaagggtattttctggttcacagatt
tggaaatgtcttcccacgaatggttgacctcattgacctcaaagcaacag
tacataacaaaacctgtcacctcagggacagaatgcaaaggagagaaaca
atgaggggccagggtcccaatatattcttgaaagacgtatctccaatgac
cagaagacctcccttgggccttcaactcttcaaagtttggctctctcata
acagtgccattggttgggggtcaaatctttagagaagatttaaccaagtc
ataggctcttggaaggagccgttgttgaaggtgagaccaaagcagagttc
agccttagtctggagccttggaggaccatttcatggccaagcaaagttgt
tggatgtgcaaatctggaactcaaggaaagtctgtcaaatcagaagactt
attttagaagtttgtatacaagccttatatatgcagctggaggttaacaa
ctgagtgctttgagcccttctaccttctgcatctggaatgccttggaaat
taccaggcagaacgggaaccataacccaagcctcacgttctctcttcgta
tcttgtcttcaggcccaggtacaatctccctttcctttcgttccttcc
gaattcagctgtccctggctttgcaaggatttgaggccttacacatgggg
gaagaacaccctagaaagatcaaggtggccactatttttttttcaaagcc
agagaaggcctgagtctcgtggcggtgtgaagcaagactggaggtggtgt
gggtggtagatgagggatacatcttagcaagaaaccagaaaagactaatt
ccctcaggcacctcctgcaggctaaaaagagagaaaagaaggccagccac
aagcttgggttcagtccctggaactgacaagtacccctatgcaggcagga
acccaacatcaggtacccgcctctcttctgttgaacttaaactagcctcg
gaatccatcccaacatagcctggcttccaggccagcttagatcttactgg
ggtgggcacctgagtgagaatatattgctcattttgttatataatcctca
taaataataaatattcctcactggtattaattcactcttgatgctagaat
atagcgatatagcctagcctataagtggtatacgtcacaagactctatag
gagggagcattctaagaactcaaaggagtgagatgtcagtgtaatctggc
catagagaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66744560_66745684
seq2: B6Ng01-304F05.b_45_1192 (reverse)

seq1  GGAAGGAA-GGAAGGAA--GGAGATGGT-CCTGGGCCTGAAGAC-AGA-A  44
      |||||||| | ||||||  |||||| || ||||||||||||||| ||| |
seq2  GGAAGGAACGAAAGGAAAGGGAGATTGTACCTGGGCCTGAAGACAAGATA  50

seq1  CG-AGAGAGAACGTGA-GCT--GGGTATGG-TCCCG-TCTGCCT-GTAA-  86
      || ||||||||||||| |||  || ||||| ||||| ||||||| |||| 
seq2  CGAAGAGAGAACGTGAGGCTTGGGTTATGGTTCCCGTTCTGCCTGGTAAT  100

seq1  TTCCA--GCATTCCAGATGCAG-AGGTAGAA-GGCTC-AAGCACTCAG-T  130
      |||||  ||||||||||||||| |||||||| ||||| |||||||||| |
seq2  TTCCAAGGCATTCCAGATGCAGAAGGTAGAAGGGCTCAAAGCACTCAGTT  150

seq1  GTTAACCT-CAGCTGCATATATAA-GCTTGTATACAAAC-TCTTAAATAA  177
      |||||||| ||||||||||||||| |||||||||||||| ||| ||||||
seq2  GTTAACCTCCAGCTGCATATATAAGGCTTGTATACAAACTTCTAAAATAA  200

seq1  GTC-TCTGATTTGACAGACTTTCCTTTGAGTTCCAGATTTGCACATCCAA  226
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCTTCTGATTTGACAGACTTTCC-TTGAGTTCCAGATTTGCACATCCAA  249

seq1  CAACTTTGCTTGGCCATGAAATGGTCCTCCAAGGCTCCAGACTAAGGCTG  276
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTGCTTGGCCATGAAATGGTCCTCCAAGGCTCCAGACTAAGGCTG  299

seq1  AACTCTGCTTTGGTCTCACCTTCAACAACGGCTCCTTCCAAGAGCCTATG  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGCTTTGGTCTCACCTTCAACAACGGCTCCTTCCAAGAGCCTATG  349

seq1  ACTTGGTTAAATCTTCTCTAAAGATTTGACCCCCAACCAATGGCACTGTT  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTTAAATCTTCTCTAAAGATTTGACCCCCAACCAATGGCACTGTT  399

seq1  ATGAGAGAGCCAAACTTTGAAGAGTTGAAGGCCCAAGGGAGGTCTTCTGG  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGAGCCAAACTTTGAAGAGTTGAAGGCCCAAGGGAGGTCTTCTGG  449

seq1  TCATTGGAGATACGTCTTTCAAGAATATATTGGGACCCTGGCCCCTCATT  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGAGATACGTCTTTCAAGAATATATTGGGACCCTGGCCCCTCATT  499

seq1  GTTTCTCTCCTTTGCATTCTGTCCCTGAGGTGACAGGTTTTGTTATGTAC  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCCTTTGCATTCTGTCCCTGAGGTGACAGGTTTTGTTATGTAC  549

seq1  TGTTGCTTTGAGGTCAATGAGGTCAACCATTCGTGGGAAGACATTTCCAA  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTTGAGGTCAATGAGGTCAACCATTCGTGGGAAGACATTTCCAA  599

seq1  ATCTGTGAACCAGAAAATACCCTTTCCTTCTCTAAGCTAATAACCTTTGG  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGAACCAGAAAATACCCTTTCCTTCTCTAAGCTAATAACCTTTGG  649

seq1  TATTGTTATGATAGTAGACAGTTGGCCCCCAAACAGGAGATTCCTATGTT  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTATGATAGTAGACAGTTGGCCCCCAAACAGGAGATTCCTATGTT  699

seq1  ACTACTTAACACAAACCTTGGCCCAGCTACTCCATCCAAAGACCTTAGAG  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTAACACAAACCTTGGCCCAGCTACTCCATCCAAAGACCTTAGAG  749

seq1  TTGCTTACCCCTGGCTGCCCACTGAGCCACATGCTCTGACTTGGTTCCCA  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTACCCCTGGCTGCCCACTGAGCCACATGCTCTGACTTGGTTCCCA  799

seq1  GTCAGCTGACTGGGGCAGAGGTAGCAGCTTCTAGATCCCTGGTGGTGTTT  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTGACTGGGGCAGAGGTAGCAGCTTCTAGATCCCTGGTGGTGTTT  849

seq1  CTTTCTTAAAGGTTTGGCTGCCTGGAAACAAATCCTTTCAGAGATTTTGT  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTAAAGGTTTGGCTGCCTGGAAACAAATCCTTTCAGAGATTTTGT  899

seq1  TGGTCTACCTCATGACTCATACTTTATATGTCTGTTTCATCACCCATATT  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACCTCATGACTCATACTTTATATGTCTGTTTCATCACCCATATT  949

seq1  TAATACTTCTGACAATTATCAATATTTAACACACCTCCCAATTACTCATA  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTCTGACAATTATCAATATTTAACACACCTCCCAATTACTCATA  999

seq1  GTTAATACATCATGGGTTTGAAAAAGCAAACGTGGTTTCTGTTGCACACC  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATACATCATGGGTTTGAAAAAGCAAACGTGGTTTCTGTTGCACACC  1049

seq1  TCTACATTCTGACAGGTAGAGTGTTGCTGAGGCCAAATGAATATGTGTAT  1076
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATTCTGACAGGTAGAGTGTTGCTGAGGCCAAATGAATATGTGTAT  1099

seq1  AACAGTTACAAAGCAAAGAAGAAAAACATGGCTACGAAAAATGGAATTC  1125
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTACAAAGCAAAGAAGAAAAACATGGCTACGAAAAATGGAATTC  1148

seq1: chr14_66608299_66608910
seq2: B6Ng01-304F05.g_68_679

seq1  GAATTCAGCTGTCCCTGGCTTTGCAAGGATTTGAGGCCTTACACATGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGTCCCTGGCTTTGCAAGGATTTGAGGCCTTACACATGGGG  50

seq1  GAAGAACACCCTAGAAAGATCAAGGTGGCCACTATTTTTTTTTCAAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACACCCTAGAAAGATCAAGGTGGCCACTATTTTTTTTTCAAAGCC  100

seq1  AGAGAAGGCCTGAGTCTCGTGGCGGTGTGAAGCAAGACTGGAGGTGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGCCTGAGTCTCGTGGCGGTGTGAAGCAAGACTGGAGGTGGTGT  150

seq1  GGGTGGTAGATGAGGGATACATCTTAGCAAGAAACCAGAAAAGACTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTAGATGAGGGATACATCTTAGCAAGAAACCAGAAAAGACTAATT  200

seq1  CCCTCAGGCACCTCCTGCAGGCTAAAAAGAGAGAAAAGAAGGCCAGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGCACCTCCTGCAGGCTAAAAAGAGAGAAAAGAAGGCCAGCCAC  250

seq1  AAGCTTGGGTTCAGTCCCTGGAACTGACAAGTACCCCTATGCAGGCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGGGTTCAGTCCCTGGAACTGACAAGTACCCCTATGCAGGCAGGA  300

seq1  ACCCAACATCAGGTACCCGCCTCTCTTCTGTTGAACTTAAACTAGCCTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACATCAGGTACCCGCCTCTCTTCTGTTGAACTTAAACTAGCCTCG  350

seq1  GAATCCATCCCAACATAGCCTGGCTTCCAGGCCAGCAGAGATCTTACTGG  400
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  GAATCCATCCCAACATAGCCTGGCTTCCAGGCCAGCTTAGATCTTACTGG  400

seq1  GGTGGGCACCTGAGTGAGAATATATTGCTCATTTTGTTATATAATCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCACCTGAGTGAGAATATATTGCTCATTTTGTTATATAATCCTCA  450

seq1  TAAATAATAAATATTCCTCACTGGTATTAATTCACTCTTGATGCTAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATAAATATTCCTCACTGGTATTAATTCACTCTTGATGCTAGAAT  500

seq1  ATAGCGATATAGCCTAGCCTATAAGTGGTATACGTCACAAGACTCTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCGATATAGCCTAGCCTATAAGTGGTATACGTCACAAGACTCTATAG  550

seq1  GAGGGAGCATTCTAAGAACTCAAAGGAGTGAGATGTCAGTGTAATCTGCC  600
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAGGGAGCATTCTAAGAACTCAAAGGAGTGAGATGTCAGTGTAATCTGGC  600

seq1  AATAGAGAAAGT  612
       |||||||||||
seq2  CATAGAGAAAGT  612