BAC Information

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BAC

Clone NameB6Ng01-305I16
Chromosome14 (Build37)
Map Location 79,774,723 - 79,919,509
singlet/doubletdoublet
Overlap geneNarg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560
Upstream geneLOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik
Downstream geneSugt1, Lect1, Pcdh8, EG629734, Olfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305I16.bB6Ng01-305I16.g
ACCGA098807GA098808
length1,1541,143
definitionB6Ng01-305I16.b B6Ng01-305I16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,774,723 - 79,775,875)(79,918,365 - 79,919,509)
sequence
gaattctctcagcattatagtaaacaggtattttaggcaaacctcaattc
tgtgtgcttcccttagggcatgttatatattaattagtgtatagtttgtc
ttcagaaatgaaccactttcatttctgactccttcccatcccctaaatat
acatacagatactaacttcttagttaaaaaataaaaagtatcttttcatt
atacatattcttctgtcctcctggcgatagctaaagcaaacagtaaaatc
caactggcaaatcatccaaatgaaacaggccagccttagtactgtaaaat
ctaaatgtgtctcccttgatcagttcctgtattaagtaactgtccattgt
cttggtttcttttctagatcattaaaattgcttaagttaacttagcacaa
ttatctaactaaacattatttcacaacaagaaaccacataagccatgctg
acaagtgcgttgtcttttaggttcaaacctttttactaatttacaaaact
cacaagtagatctggaaaataaggctctaaaagcctcagacacaatggga
agtacatttaaactaaggtaaagaggcttttcttaaataaatgtaccaca
cattcctattccccaaggaaccgatttcaaaggaaaaaaaaaggctttgg
aatatctgtgatattatttaacattcatcatactgtggtcgatggcatat
aatttattcatattattttccatgttacataatcaatttccaaaataaaa
ttaaactaggtataattacatcacacatagcaactttgtgaacttgggca
agtagttaggcctgatacaaaatgggcagacgtgggctggtgagatggct
cagtgggtaagagcacccgactgctcttccgaaggtcaggagttcaaatc
ccagcaaccacatggtgtctcacaaccatccgtaacgagatctgactccc
tcttctggagtgtctgagacagctacagtgtacttacatataataataaa
taaataaataaacaaaatgggcagacgtactgttgggtgagaagaaaaca
gtaacgtgcccttactccccgcacaactgtcctgcttaccccatatataa
cttgcagcagcacattttcactcccaataaacatctgttatttgcctacc
acca
gaattccaggactaggatgctgaagttaaaagaggctggagaattcaggg
ccagcctgggctaattagggggatcctgtctcaataagagaaagaatgga
aaaacaaaccagaagtggggggatgactcaaaggtcgagagcacttgccg
cttcagctctcagcacccttgtcggtcgtcggtgccttaccagtaacgag
ctccacgggaatcagacagctttgctttttaataaacaggacaaagaatt
ttataaacaggaggaactgaaaatgtaatgagaactgaatctactagaag
ataatgtaaaggcgcatttcacctactgctaaaaagcacataaaatggca
gataccccctgctaaccccttgtctgtgaacgttaaagcagtaaagttag
accagcaaagcagcagcctcctcctcagctcccctttttccaaggcctga
gctgagcaaggcccagaaacttggacctctactttcactttcttcgaaaa
aggtcgatttcttcatcaagtgccccgatatgcaaaaatactccactgta
aagtcgtgtttggcgtaaactttaataaaattaaattttggccacataat
tctgtggatatgacatcatgtacttatccaatacttagtttctgaactat
tggctcatttccaatggcgcagtactgcagtgatgctcaaagtccttctc
aggcccacaaaggacctagaaaccttgtcagcacttaatagctcaaaatg
accctcataatgcaaccgggtgtccgttacaccctctaggtgcactgact
tgtgcagtgttggggcaagagcaacttcaagctggagcttgccagcctcg
gcaggagtcaaaggctacacagccaaaccacactactttgtatttttacc
aactagcactgacagcttttaaaacgttttctattttatgtgtatatgag
tgttttgcctgcatgtattgtcagtgtaccacgcacttgtctggtgccag
cagaccacagagggaggtcaatcttcttagaacgggagctacacatagct
gtgagtgctgagaatttaaacccagactctggaaggtaggcagcagtgct
ctttaatggtggagcacctctcagtccagacctgaatgtttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79774723_79775875
seq2: B6Ng01-305I16.b_49_1202

seq1  GAATTCTCTCAGCATTATAGTAAACAGGTATTTTAGGCAAACCTCAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAGCATTATAGTAAACAGGTATTTTAGGCAAACCTCAATTC  50

seq1  TGTGTGCTTCCCTTAGGGCATGTTATATATTAATTAGTGTATAGTTTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCTTCCCTTAGGGCATGTTATATATTAATTAGTGTATAGTTTGTC  100

seq1  TTCAGAAATGAACCACTTTCATTTCTGACTCCTTCCCATCCCCTAAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAATGAACCACTTTCATTTCTGACTCCTTCCCATCCCCTAAATAT  150

seq1  ACATACAGATACTAACTTCTTAGTTAAAAAATAAAAAGTATCTTTTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGATACTAACTTCTTAGTTAAAAAATAAAAAGTATCTTTTCATT  200

seq1  ATACATATTCTTCTGTCCTCCTGGCGATAGCTAAAGCAAACAGTAAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATTCTTCTGTCCTCCTGGCGATAGCTAAAGCAAACAGTAAAATC  250

seq1  CAACTGGCAAATCATCCAAATGAAACAGGCCAGCCTTAGTACTGTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGCAAATCATCCAAATGAAACAGGCCAGCCTTAGTACTGTAAAAT  300

seq1  CTAAATGTGTCTCCCTTGATCAGTTCCTGTATTAAGTAACTGTCCATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTGTCTCCCTTGATCAGTTCCTGTATTAAGTAACTGTCCATTGT  350

seq1  CTTGGTTTCTTTTCTAGATCATTAAAATTGCTTAAGTTAACTTAGCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTCTTTTCTAGATCATTAAAATTGCTTAAGTTAACTTAGCACAA  400

seq1  TTATCTAACTAAACATTATTTCACAACAAGAAACCACATAAGCCATGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAACTAAACATTATTTCACAACAAGAAACCACATAAGCCATGCTG  450

seq1  ACAAGTGCGTTGTCTTTTAGGTTCAAACCTTTTTACTAATTTACAAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGCGTTGTCTTTTAGGTTCAAACCTTTTTACTAATTTACAAAACT  500

seq1  CACAAGTAGATCTGGAAAATAAGGCTCTAAAAGCCTCAGACACAATGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTAGATCTGGAAAATAAGGCTCTAAAAGCCTCAGACACAATGGGA  550

seq1  AGTACATTTAAACTAAGGTAAAGAGGCTTTTCTTAAATAAATGTACCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATTTAAACTAAGGTAAAGAGGCTTTTCTTAAATAAATGTACCACA  600

seq1  CATTCCTATTCCCCAAGGAACCGATTTCAAAGGAAAAAAAAAGGCTTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTATTCCCCAAGGAACCGATTTCAAAGGAAAAAAAAAGGCTTTGG  650

seq1  AATATCTGTGATATTATTTAACATTCATCATACTGTGGTCGATGGCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGTGATATTATTTAACATTCATCATACTGTGGTCGATGGCATAT  700

seq1  AATTTATTCATATTATTTTCCATGTTACATAATCAATTTCCAAAATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTCATATTATTTTCCATGTTACATAATCAATTTCCAAAATAAAA  750

seq1  TTAAACTAGGTATAATTACATCACACATAGCAACTTTGTGAACTTGGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTAGGTATAATTACATCACACATAGCAACTTTGTGAACTTGGGCA  800

seq1  AGTAGTTAGGCCTGATACAAAATGGGCAGACGTGGGCTGGTGAGATGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTAGGCCTGATACAAAATGGGCAGACGTGGGCTGGTGAGATGGCT  850

seq1  CAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATC  900

seq1  CCAGCAACCACATGGTGTCTCACAACCATCCGTAACGAGATCTGACTCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAACCACATGGTGTCTCACAACCATCCGTAACGAGATCTGACTCCC  950

seq1  TCTTCTGGAGTGTCTGAGGACAGCTACAGTGTACTTACATATAATAAATA  1000
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  TCTTCTGGAGTGTCTGA-GACAGCTACAGTGTACTTACATATAAT-AATA  998

seq1  AATAAATAAATAAACAAAATGGGCAGACGTAACTGTTGGGTGAGA--GAA  1048
      |||||||||||||||||||||||||||||| ||||||||||||||   ||
seq2  AATAAATAAATAAACAAAATGGGCAGACGT-ACTGTTGGGTGAGAAGAAA  1047

seq1  ACAGTAAACGTGCCCTAACT-CCCGCACAACTGTCCTGCTTACCCCATAT  1097
      ||||| |||||||||| ||| |||||||||||||||||||||||||||||
seq2  ACAGT-AACGTGCCCTTACTCCCCGCACAACTGTCCTGCTTACCCCATAT  1096

seq1  ATAACTGGCAGCAGCACATTTTCACTCCC-ATAAACATCTGTTATTTG-C  1145
      |||||| |||||||||||||||||||||| |||||||||||||||||| |
seq2  ATAACTTGCAGCAGCACATTTTCACTCCCAATAAACATCTGTTATTTGCC  1146

seq1  TACCACCA  1153
      ||||||||
seq2  TACCACCA  1154

seq1: chr14_79918365_79919509
seq2: B6Ng01-305I16.g_68_1210 (reverse)

seq1  TAAAACATGTCAGTGCTGGGACTGGAGAGGTGGCTCCA-CATTTAAGAGC  49
      |||||||| ||||  || ||||| ||||||| |||||| |||| ||||||
seq2  TAAAACAT-TCAGGTCT-GGACT-GAGAGGT-GCTCCACCATTAAAGAGC  46

seq1  ACTGGCTGCCTTCCCTTCCAGAGTTCTTGGGTTTAATTCTCAGCACCTCA  99
      ||| |||||| | |||||||||| ||| || || ||||||||||| ||||
seq2  ACT-GCTGCC-TACCTTCCAGAG-TCTGGGTTTAAATTCTCAGCA-CTCA  92

seq1  CAGCTATGTGTAGCT-CCGTTCTAAGAGATTTGACCT-CCTCTGTGTTCT  147
      ||||||||||||||| |||||||||||   ||||||| |||||||| |||
seq2  CAGCTATGTGTAGCTCCCGTTCTAAGAAGATTGACCTCCCTCTGTGGTCT  142

seq1  GCTGGCACCAGACAAGTGCGTGGTACACTGAC-ATACATGCAGGCAAAAC  196
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCTGGCACCAGACAAGTGCGTGGTACACTGACAATACATGCAGGCAAAAC  192

seq1  ACTCATATACACATAAAATAGTAAACGTTTTAAAAGCTGTCAGTGCTAGT  246
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTCATATACACATAAAATAGAAAACGTTTTAAAAGCTGTCAGTGCTAGT  242

seq1  TGGTAAAAATAC-AAGTAGTGTGGTTTGGCTGTGTAGCC-TTGACTCCTG  294
      |||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  TGGTAAAAATACAAAGTAGTGTGGTTTGGCTGTGTAGCCTTTGACTCCTG  292

seq1  CCGAGGCTGGCAAGCTCCAGCTTGAAGTTGCTCTTGCCCCAACACTGCAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGCTGGCAAGCTCCAGCTTGAAGTTGCTCTTGCCCCAACACTGCAC  342

seq1  AAGTCAGTGCACCTAGAGGGTGTAACGGACACCCGGTTGCATTATGAGGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTGCACCTAGAGGGTGTAACGGACACCCGGTTGCATTATGAGGG  392

seq1  TCATTTTGAGCTATTAAGTGCTGACAAGGTTTCTAGGTCCTTTGTGGGCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGAGCTATTAAGTGCTGACAAGGTTTCTAGGTCCTTTGTGGGCC  442

seq1  TGAGAAGGACTTTGAGCATCACTGCAGTACTGCGCCATTGGAAATGAGCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGACTTTGAGCATCACTGCAGTACTGCGCCATTGGAAATGAGCC  492

seq1  AATAGTTCAGAAACTAAGTATTGGATAAGTACATGATGTCATATCCACAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTCAGAAACTAAGTATTGGATAAGTACATGATGTCATATCCACAG  542

seq1  AATTATGTGGCCAAAATTTAATTTTATTAAAGTTTACGCCAAACACGACT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTGGCCAAAATTTAATTTTATTAAAGTTTACGCCAAACACGACT  592

seq1  TTACAGTGGAGTATTTTTGCATATCGGGGCACTTGATGAAGAAATCGACC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTGGAGTATTTTTGCATATCGGGGCACTTGATGAAGAAATCGACC  642

seq1  TTTTTCGAAGAAAGTGAAAGTAGAGGTCCAAGTTTCTGGGCCTTGCTCAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCGAAGAAAGTGAAAGTAGAGGTCCAAGTTTCTGGGCCTTGCTCAG  692

seq1  CTCAGGCCTTGGAAAAAGGGGAGCTGAGGAGGAGGCTGCTGCTTTGCTGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCCTTGGAAAAAGGGGAGCTGAGGAGGAGGCTGCTGCTTTGCTGG  742

seq1  TCTAACTTTACTGCTTTAACGTTCACAGACAAGGGGTTAGCAGGGGGTAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTTTACTGCTTTAACGTTCACAGACAAGGGGTTAGCAGGGGGTAT  792

seq1  CTGCCATTTTATGTGCTTTTTAGCAGTAGGTGAAATGCGCCTTTACATTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATTTTATGTGCTTTTTAGCAGTAGGTGAAATGCGCCTTTACATTA  842

seq1  TCTTCTAGTAGATTCAGTTCTCATTACATTTTCAGTTCCTCCTGTTTATA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAGTAGATTCAGTTCTCATTACATTTTCAGTTCCTCCTGTTTATA  892

seq1  AAATTCTTTGTCCTGTTTATTAAAAAGCAAAGCTGTCTGATTCCCGTGGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTTGTCCTGTTTATTAAAAAGCAAAGCTGTCTGATTCCCGTGGA  942

seq1  GCTCGTTACTGGTAAGGCACCGACGACCGACAAGGGTGCTGAGAGCTGAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTTACTGGTAAGGCACCGACGACCGACAAGGGTGCTGAGAGCTGAA  992

seq1  GCGGCAAGTGCTCTCGACCTTTGAGTCATCCCCCCACTTCTGGTTTGTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCAAGTGCTCTCGACCTTTGAGTCATCCCCCCACTTCTGGTTTGTTT  1042

seq1  TTCCATTCTTTCTCTTATTGAGACAGGATCCCCCTAATTAGCCCAGGCTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCTTTCTCTTATTGAGACAGGATCCCCCTAATTAGCCCAGGCTG  1092

seq1  GCCCTGAATTCTCCAGCCTCTTTTAACTTCAGCATCCTAGTCCTGGAATT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGAATTCTCCAGCCTCTTTTAACTTCAGCATCCTAGTCCTGGAATT  1142

seq1  C  1145
      |
seq2  C  1143