BAC Information

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BAC

Clone NameB6Ng01-305K01
Chromosome14 (Build37)
Map Location 101,383,943 - 101,526,461
singlet/doubletdoublet
Overlap genenone
Upstream geneKlf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305K01.bB6Ng01-305K01.g
ACCGA098872GA098873
length1,084845
definitionB6Ng01-305K01.b B6Ng01-305K01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,525,426 - 101,526,461)(101,383,943 - 101,384,784)
sequence
gaattctaatgtctttggattgtgattcaaattctttgggcaaatactca
gatgcaagattgagtaggaattttatttatttttattgtattataatata
gttaccatgtttctcccatctcttttcttcttccaaaaccctcacaaaaa
gccctccctattttcattcaatcttatgttctctcttttcactcattaca
agtgaatgcatctatattcctaaatctaacctgctaagtccatatgttac
atgtatgtatttttttctgagctaactgtgtggcacaggacagacaattg
gtgtgctcttccttgagtgtcgccatctctctcattcctagctttcctca
gtcacttgtagttcattgtgtaggcttgagacttgtaggctttcccatcc
aatttcacatgtctgttggtgttggaaatataattgtgaggtaactgcac
actgtttcccatagtggcttggcattttgaaacacaaaacccacggcatc
aactagctccatttccttgccaacaatttttccccatttctttatacaaa
ttaaagacaagtctctcttcttctctgatgtgcatagtttataaccttta
ttctgtcatctgctgtgtcccttgctagatcctttgacgattttcttttt
tgtcactgctgctcaggaatatggtgacaacatacattggtttgcttttt
ctcaggattcagatcttcctttatttgagaatttatgtttttcatcagaa
atatttttgccatcctttcttcacataattttggttattctctcctcacc
aaattttctctttcctatttttaaggccgtcattacatgcgtagaaagtt
gttgttggtgtaagttcagcgaagtcccactcctgttctgcccatgcttt
actttggtcactggcttcattgtgtctcaagccactgtcctctctttgca
ttatctgtagtatcactgtgacccttttctacttcttgccacaggggttt
tcatcactaaaggactttttatatttatctacagttttgacacagtggca
tatttataaataggcggtttatttcattgttgtt

gaattctcttctcccagagtcctcctgctctctctctctctctctctcgc
tctctctctctctctcccagaagtaccaccttactttcctgcctttgctg
taggccatcatctttttattaaaatcaatcagaagacttgagagtaagca
ttgaaaagatatgatgcaggtgctacttaacaattggagtgacaatatca
aagtccagtctgttctcaactttctgatagcacagaaattagcatttgaa
taacacagagacaatcttcacactgtgcacgaaaagtctatccctagatc
tttcctctctaataaccttgtttgactgaaatcttatttaaatgtaagaa
ttatttatataatctggagaaaaaaatgcattgggagagaggtacatcaa
aaaaaaaaacctattttctctctttttttgagtggtaaaggttgttttgt
cttgttgggaaggttgtggagagggtccatgccagcgcactgtgctgctc
ggcatgcacattctatgaatcctttgtccttccgtccataggactttgat
gagaagaaaccttaaattttgttaaaatttaatttggaacatctttgtgc
tgacaaaatcattgtgttctaatgaatttttcctcacttcatgatagaac
tgcataattccttttatgtcttctgtatcttctatatttaaagttctaag
ttctgaattaatttcctgggaccatatgacttttgcaaatgcatgccaac
aaccctgcttgtatttcctctctagcagtcaatatgaagtagagaattgt
ttagtctgatgggtttttagtgggcttgtgggctgtgtttggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101525426_101526461
seq2: B6Ng01-305K01.b_102_1132 (reverse)

seq1  ATCAACAAACATGAAATTAAAACGCCTA-TTATAAATATGCCACTTGTGT  49
         |||||  |||||| |||| |||||| ||||||||||||||| |||| 
seq2  ---AACAACAATGAAA-TAAACCGCCTATTTATAAATATGCCAC-TGTG-  44

seq1  TCAAAACTGTAGATAAATATAAAAAGTCTTTTAGTGATGAAAAACCCCTG  99
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  TCAAAACTGTAGATAAATATAAAAAGTCCTTTAGTGATG-AAAACCCCTG  93

seq1  T-GCAAGAAGTAGAAAAGGGTCACAGTGATACTACAGATAATGCAAAGAG  148
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGAAGTAGAAAAGGGTCACAGTGATACTACAGATAATGCAAAGAG  143

seq1  AGGACAGTGGCTTGAGACACAATGAAGCCAGTGACCAAAGTAAAGCATGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTGGCTTGAGACACAATGAAGCCAGTGACCAAAGTAAAGCATGG  193

seq1  GCAGAACAGGAGTGGGACTTCGCTGAACTTACACCAACAACAACTTTCTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACAGGAGTGGGACTTCGCTGAACTTACACCAACAACAACTTTCTA  243

seq1  CGCATGTAATGACGGCCTTAAAAATAGGAAAGAGAAAATTTGGTGAGGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATGTAATGACGGCCTTAAAAATAGGAAAGAGAAAATTTGGTGAGGAG  293

seq1  AGAATAACCAAAATTATGTGAAGAAAGGATGGCAAAAATATTTCTGATGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAACCAAAATTATGTGAAGAAAGGATGGCAAAAATATTTCTGATGA  343

seq1  AAAACATAAATTCTCAAATAAAGGAAGATCTGAATCCTGAGAAAAAGCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAAATTCTCAAATAAAGGAAGATCTGAATCCTGAGAAAAAGCAA  393

seq1  ACCAATGTATGTTGTCACCATATTCCTGAGCAGCAGTGACAAAAAAGAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGTATGTTGTCACCATATTCCTGAGCAGCAGTGACAAAAAAGAAA  443

seq1  ATCGTCAAAGGATCTAGCAAGGGACACAGCAGATGACAGAATAAAGGTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTCAAAGGATCTAGCAAGGGACACAGCAGATGACAGAATAAAGGTTA  493

seq1  TAAACTATGCACATCAGAGAAGAAGAGAGACTTGTCTTTAATTTGTATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATGCACATCAGAGAAGAAGAGAGACTTGTCTTTAATTTGTATAA  543

seq1  AGAAATGGGGAAAAATTGTTGGCAAGGAAATGGAGCTAGTTGATGCCGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGGGAAAAATTGTTGGCAAGGAAATGGAGCTAGTTGATGCCGTG  593

seq1  GGTTTTGTGTTTCAAAATGCCAAGCCACTATGGGAAACAGTGTGCAGTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTGTTTCAAAATGCCAAGCCACTATGGGAAACAGTGTGCAGTTA  643

seq1  CCTCACAATTATATTTCCAACACCAACAGACATGTGAAATTGGATGGGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAATTATATTTCCAACACCAACAGACATGTGAAATTGGATGGGAA  693

seq1  AGCCTACAAGTCTCAAGCCTACACAATGAACTACAAGTGACTGAGGAAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACAAGTCTCAAGCCTACACAATGAACTACAAGTGACTGAGGAAAG  743

seq1  CTAGGAATGAGAGAGATGGCGACACTCAAGGAAGAGCACACCAATTGTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAATGAGAGAGATGGCGACACTCAAGGAAGAGCACACCAATTGTCT  793

seq1  GTCCTGTGCCACACAGTTAGCTCAGAAAAAAATACATACATGTAACATAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTGCCACACAGTTAGCTCAGAAAAAAATACATACATGTAACATAT  843

seq1  GGACTTAGCAGGTTAGATTTAGGAATATAGATGCATTCACTTGTAATGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTAGCAGGTTAGATTTAGGAATATAGATGCATTCACTTGTAATGAG  893

seq1  TGAAAAGAGAGAACATAAGATTGAATGAAAATAGGGAGGGCTTTTTGTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAGAGAACATAAGATTGAATGAAAATAGGGAGGGCTTTTTGTGA  943

seq1  GGGTTTTGGAAGAAGAAAAGAGATGGGAGAAACATGGTAACTATATTATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGGAAGAAGAAAAGAGATGGGAGAAACATGGTAACTATATTATA  993

seq1  ATACAATAAAAATAAATAAAATTCCTACTCAATCTTGC  1036
      ||||||||||||||||||||||||||||||||||||||
seq2  ATACAATAAAAATAAATAAAATTCCTACTCAATCTTGC  1031


seq1: chr14_101383943_101384784
seq2: B6Ng01-305K01.g_69_913

seq1  GAATTCTCTTCTCCCAGAGTCCTCCTGCTCTCTCTCTCTCTCTCTCTCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTCCCAGAGTCCTCCTGCTCTCTCTCTCTCTCTCTCTCGC  50

seq1  TCTCTCTCTCTCTCTCCCAGAAGTACCACCTTACTTTCCTGCCTTTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCCCAGAAGTACCACCTTACTTTCCTGCCTTTGCTG  100

seq1  TAGGCCATCATCTTTTTATTAAAATCAATCAGAAGACTTGAGAGTAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCATCATCTTTTTATTAAAATCAATCAGAAGACTTGAGAGTAAGCA  150

seq1  TTGAAAAGATATGATGCAGGTGCTACTTAACAATTGGAGTGACAATATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGATATGATGCAGGTGCTACTTAACAATTGGAGTGACAATATCA  200

seq1  AAGTCCAGTCTGTTCTCAACTTTCTGATAGCACAGAAATTAGCATTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAGTCTGTTCTCAACTTTCTGATAGCACAGAAATTAGCATTTGAA  250

seq1  TAACACAGAGACAATCTTCACACTGTGCACGAAAAGTCTATCCCTAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGAGACAATCTTCACACTGTGCACGAAAAGTCTATCCCTAGATC  300

seq1  TTTCCTCTCTAATAACCTTGTTTGACTGAAATCTTATTTAAATGTAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTCTAATAACCTTGTTTGACTGAAATCTTATTTAAATGTAAGAA  350

seq1  TTATTTATATAATCTGGAGAAAAAAATGCATTGGGAGAGAGGTACATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATATAATCTGGAGAAAAAAATGCATTGGGAGAGAGGTACATCAA  400

seq1  AAAAAAAAACCTATTTTCTCTCTTTTTTTGAGTGGTAAAGGTTGTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACCTATTTTCTCTCTTTTTTTGAGTGGTAAAGGTTGTTTTGT  450

seq1  CTTGTTGGGAAGGTTGTGGAGAGGGTCCATGCCAGCGCACTGTGCTGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGGGAAGGTTGTGGAGAGGGTCCATGCCAGCGCACTGTGCTGCTC  500

seq1  GGCATGCACATTCTATGAATCCTTTGTCCTTCCGTCCATAGGACTTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCACATTCTATGAATCCTTTGTCCTTCCGTCCATAGGACTTTGAT  550

seq1  GAGAAGAAACCTTAAATTTTGTTAAAATTTAATTTGGAACATCTTTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAACCTTAAATTTTGTTAAAATTTAATTTGGAACATCTTTGTGC  600

seq1  TGAC-AAATCATTGTGTTCTAATGAATTTTTCCTCACTTCATGATAGAAC  649
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAATCATTGTGTTCTAATGAATTTTTCCTCACTTCATGATAGAAC  650

seq1  TGCATAATTCCTTTTATGTCTTCTGTATCTTCTATATTTAAAGTTCTAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATTCCTTTTATGTCTTCTGTATCTTCTATATTTAAAGTTCTAAG  700

seq1  TTCTGAATTAATTTCCT-GGACCATATGACTTTTGCAAATGCATGCCAAC  748
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCTGAATTAATTTCCTGGGACCATATGACTTTTGCAAATGCATGCCAAC  750

seq1  AA-CCTGCTTGTATTTCCTCTCTAGCAGTCAGTATGAAGTAGAGAATTGT  797
      || |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AACCCTGCTTGTATTTCCTCTCTAGCAGTCAATATGAAGTAGAGAATTGT  800

seq1  TTTGTTTGATGGGTTTTTAGTTGGGCTT-TGGGCTTTGTTTTGCTG  842
      || || |||||||||||||| ||||||| |||||| ||||| ||||
seq2  TTAGTCTGATGGGTTTTTAG-TGGGCTTGTGGGCTGTGTTTGGCTG  845


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