BAC Information

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BAC

Clone NameB6Ng01-306D20
Chromosome14 (Build37)
Map Location 82,280,166 - 82,433,620
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306D20.bB6Ng01-306D20.g
ACCGA099328GA099329
length1,0181,057
definitionB6Ng01-306D20.b B6Ng01-306D20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,432,603 - 82,433,620)(82,280,166 - 82,280,977)
sequence
gaattctgagttaaccatattaattttacacagatgctcctctacactct
gaccacctgagcttcctgacctcacttcttcatgtagtttcatgaaattt
ccttcacttccactgaaaaattgtaatataaatactactatattatcaaa
cactctgatgagacatattttctcttgtactcttttgtactcatcatgcc
ttatttattttaaatgttaatgtaagcttttattcatattaaatctattt
atgcttaatcttccttcaggtcatgccatgacaaaaagtggtaaactgct
attttaagataaatattaaaatcatgtttgtatatcaaaatatctccaca
agtaatgaaaataatgttgtttcattgtaaaaggttgggttttccataaa
taaactcagttagcaggtaattgacattaaaaaaaatccatgttttaaga
tgatagaaatatctgtctttatctttcatctaccactaaattgcctcatt
tgtatgatggtgaaagtaaaagacagagatgtctattaatgcagatattc
acatcactttaagaaaattcactcattaaaatttagatctgtggttccat
tgacatttcttttacaagcttctcaattatccccattgtgtctttagtca
ttaaggtttgtttcaccacaataccttctaataatgttaaatttgataac
actacgtcaaagtattttaacactgcttaggtagaatactcaacctggac
tcactttgttgctgccaatccagattggtgtccctataaacagagtaatc
aaataccaaaagaccaagaaaggaaagaaagaatggcttgtgtcaggcag
taaattcaatgacttttttttaggactcttgagaatttacctaccaaaat
acattttccctgaaatttggacaaagcatatttctgaactattgttactt
aaagatctgcatattggattccttcttagtgctatcaatgtttgctctgt
ctaggggggggttgggtg

gaattctttgtttagccctgagccccatttttaatggggttatttgattt
tctggaggtaacccaatcacaaaaaaacctcacatgatatgtactcactg
ataagtggatatttgcccagaaacttagaatacccaagatacaatttgca
aaacacatgaaactcaagaagaatgaagactaaagtgtggacactttgcc
cctttttagtattgagaacaaaacacccatggaaggagttacagagacaa
actttggagctgagaggaaaggatggaccacctggagactgctgcaccca
gggatcaatcccataatcagcctccaaacacagacaccattgcatatgcc
agcaagattttgctgaaaagaccccgataaagctgtctcttgtgaggcta
tgcctgtgcctggcaaacacagaagtggatgctcatagtcagctattgga
tgcaacacagggcccccagtggaggagctagagaaagtacccaaggagat
aaaggggtctgcaactctatagatagaacaacaatatgaactaaccagta
cccccacagcttgtttctctagctgcatatgtagcagaagatggcctagg
tggccgtcattggtaagagtggccccttggtcttacaaactctataagcc
ccagtacaggggaacatcagggccaagaaatgaaagtgggtgggtagggg
agcagaccaggtggagggtataaggaactttcaggatagcatttgaaatg
tatataaagaaaataataaataaaaaacatttttaaaaagaaaaagaaaa
aaaataaaaagaagacaaaccatacagaacaaattttttaaaaaagaaaa
aaaaatcatcaactaattgtgctgtcctgactggatgtctactgtagaag
agcacaaacccttgtagtccagcagacgagactcacataaaacagataac
tgaactaataaagcgaagtaaaaatagctgacaatggcacagggaaattt
cctttaaaaattggatatttattaattgattaaatagattccgttcgatc
ctctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82432603_82433620
seq2: B6Ng01-306D20.b_47_1064 (reverse)

seq1  CACCCAA-CCCCCCCTAGACAGAGCAAACATTGATAGCACTAAGAAGGGA  49
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  CACCCAACCCCCCCCTAGACAGAGCAAACATTGATAGCACTAAGAA-GGA  49

seq1  ATCCAATATGCAGATCTTTAAGTAACAATAGTTCAGAAATATGCTTTTGT  99
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATCCAATATGCAGATCTTTAAGTAACAATAGTTCAGAAATATGC-TTTGT  98

seq1  CCAAATTTCAGGGAAAATGTATTTTGGTAGGTAAATTCTCAAGAGTCCTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTCAGGGAAAATGTATTTTGGTAGGTAAATTCTCAAGAGTCCTA  148

seq1  AAAAAAAGTCATTGAATTTACTGCCTGACACAAGCCATTCTTTCTTTCC-  198
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAAAAAGTCATTGAATTTACTGCCTGACACAAGCCATTCTTTCTTTCCT  198

seq1  TTCTTGGTCTTTTGGTATTTGATTACTCTGTTTATAGGGACACCAATCTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTCTTTTGGTATTTGATTACTCTGTTTATAGGGACACCAATCTG  248

seq1  GATTGGCAGCAACAAAGTGAGTCCAGGTTGAGTATTCTACCTAAGCAGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCAGCAACAAAGTGAGTCCAGGTTGAGTATTCTACCTAAGCAGTG  298

seq1  TTAAAATACTTTGACGTAGTGTTATCAAATTTAACATTATTAGAAGGTAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATACTTTGACGTAGTGTTATCAAATTTAACATTATTAGAAGGTAT  348

seq1  TGTGGTGAAACAAACCTTAATGACTAAAGACACAATGGGGATAATTGAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGAAACAAACCTTAATGACTAAAGACACAATGGGGATAATTGAGA  398

seq1  AGCTTGTAAAAGAAATGTCAATGGAACCACAGATCTAAATTTTAATGAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTAAAAGAAATGTCAATGGAACCACAGATCTAAATTTTAATGAGT  448

seq1  GAATTTTCTTAAAGTGATGTGAATATCTGCATTAATAGACATCTCTGTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCTTAAAGTGATGTGAATATCTGCATTAATAGACATCTCTGTCT  498

seq1  TTTACTTTCACCATCATACAAATGAGGCAATTTAGTGGTAGATGAAAGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTCACCATCATACAAATGAGGCAATTTAGTGGTAGATGAAAGAT  548

seq1  AAAGACAGATATTTCTATCATCTTAAAACATGGATTTTTTTTAATGTCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGATATTTCTATCATCTTAAAACATGGATTTTTTTTAATGTCAA  598

seq1  TTACCTGCTAACTGAGTTTATTTATGGAAAACCCAACCTTTTACAATGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGCTAACTGAGTTTATTTATGGAAAACCCAACCTTTTACAATGAA  648

seq1  ACAACATTATTTTCATTACTTGTGGAGATATTTTGATATACAAACATGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTATTTTCATTACTTGTGGAGATATTTTGATATACAAACATGAT  698

seq1  TTTAATATTTATCTTAAAATAGCAGTTTACCACTTTTTGTCATGGCATGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTTATCTTAAAATAGCAGTTTACCACTTTTTGTCATGGCATGA  748

seq1  CCTGAAGGAAGATTAAGCATAAATAGATTTAATATGAATAAAAGCTTACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGGAAGATTAAGCATAAATAGATTTAATATGAATAAAAGCTTACA  798

seq1  TTAACATTTAAAATAAATAAGGCATGATGAGTACAAAAGAGTACAAGAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATTTAAAATAAATAAGGCATGATGAGTACAAAAGAGTACAAGAGA  848

seq1  AAATATGTCTCATCAGAGTGTTTGATAATATAGTAGTATTTATATTACAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTCTCATCAGAGTGTTTGATAATATAGTAGTATTTATATTACAA  898

seq1  TTTTTCAGTGGAAGTGAAGGAAATTTCATGAAACTACATGAAGAAGTGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGTGGAAGTGAAGGAAATTTCATGAAACTACATGAAGAAGTGAG  948

seq1  GTCAGGAAGCTCAGGTGGTCAGAGTGTAGAGGAGCATCTGTGTAAAATTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAGCTCAGGTGGTCAGAGTGTAGAGGAGCATCTGTGTAAAATTA  998

seq1  ATATGGTTAACTCAGAATTC  1018
      ||||||||||||||||||||
seq2  ATATGGTTAACTCAGAATTC  1018


seq1: chr14_82280166_82280977
seq2: B6Ng01-306D20.g_346_1122

seq1  CCTGGAGACTGCTGCACCCAGGGATCAATCCCATAATCAGCCTCCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGACTGCTGCACCCAGGGATCAATCCCATAATCAGCCTCCAAACA  50

seq1  CAGACACCATTGCATATGCCAGCAAGATTTTGCTGAAAAGACCCCGATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACCATTGCATATGCCAGCAAGATTTTGCTGAAAAGACCCCGATAA  100

seq1  AGCTGTCTCTTGTGAGGCTATGCCTGTGCCTGGCAAACACAGAAGTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTCTTGTGAGGCTATGCCTGTGCCTGGCAAACACAGAAGTGGAT  150

seq1  GCTCATAGTCAGCTATTGGATGCAACACAGGGCCCCCAGTGGAGGAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATAGTCAGCTATTGGATGCAACACAGGGCCCCCAGTGGAGGAGCTA  200

seq1  GAGAAAGTACCCAAGGAGATAAAGGGGTCTGCAACTCTATAGATAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTACCCAAGGAGATAAAGGGGTCTGCAACTCTATAGATAGAACA  250

seq1  ACAATATGAACTAACCAGTACCCCCACAGCTTGTTTCTCTAGCTGCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATGAACTAACCAGTACCCCCACAGCTTGTTTCTCTAGCTGCATAT  300

seq1  GTAGCAGAAGATGGCCTAGGTGGCCGTCATTGGTAAGAGTGGCCCCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGAAGATGGCCTAGGTGGCCGTCATTGGTAAGAGTGGCCCCTTGG  350

seq1  TCTTACAAACTCTATAAGCCCCAGTACAGGGGAACATCAGGGCCAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAAACTCTATAAGCCCCAGTACAGGGGAACATCAGGGCCAAGAAA  400

seq1  TGAAAGTGGGTGGGTAGGGGAGCAGACCAGGTGGAGGGTATAAGGAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTGGGTGGGTAGGGGAGCAGACCAGGTGGAGGGTATAAGGAACTT  450

seq1  TCAGGATAGCATTTGAAATGTATATAAAGAAAATAATAAATAAAAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATAGCATTTGAAATGTATATAAAGAAAATAATAAATAAAAAACAT  500

seq1  TTTTAAAAAGAAAAAGAAAAAAAATAAAAAGAAGACAAAACCATACAGAA  550
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTTAAAAAGAAAAAGAAAAAAAATAAAAAGAAGAC-AAACCATACAGAA  549

seq1  CAAAATTTTTTAAAAAAGAAAAAAAAATCATCAACTAATTGTGCTGTCCT  600
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AAATTTTTTAAAAAAGAAAAAAAAATCATCAACTAATTGTGCTGTCCT  598

seq1  GACTGGATGTCTACTTGTAGAAGAGCACAAA-CCTTGTAGTCCAAGCAGA  649
      |||||||||||||| |||||||||||||||| ||||||||||| ||||||
seq2  GACTGGATGTCTAC-TGTAGAAGAGCACAAACCCTTGTAGTCC-AGCAGA  646

seq1  CGAAGGACCTCAACATAAAACCAGATAAACTGAACCTAATAAAAGCGAAA  699
      |||  || ||| |||||||| ||||| ||||||| ||||| |||||||| 
seq2  CGA--GA-CTC-ACATAAAA-CAGAT-AACTGAA-CTAAT-AAAGCGAA-  687

seq1  GTTAAAAATAGCCTTGAACACATTGGCACAGGGGAAATTTTCTTTTTAAA  749
        ||||||||||  ||   ||| ||||||| ||||||||| ||||   ||
seq2  -GTAAAAATAGC--TG---ACAATGGCACA-GGGAAATTTCCTTT---AA  727

seq1  AAATTGGATATTTTATTTATTTGTAATTTAAATAGTATTCCCTTTCTGGG  799
      |||||||||| |||||| |||      |||||||| ||||| ||     |
seq2  AAATTGGATA-TTTATTAATT----GATTAAATAG-ATTCCGTT----CG  767

seq1  TTTCCCCTCTGAA  812
       |   ||||||||
seq2  AT---CCTCTGAA  777


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