BAC Information

Click to search

BAC

Clone NameB6Ng01-306E06
Chromosome14 (Build37)
Map Location 111,042,198 - 111,042,871
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306E06.bB6Ng01-306E06.g
ACCGA099348GA099349
length672836
definitionB6Ng01-306E06.b B6Ng01-306E06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcatcttcagttttttaccaatttttgagtacaacaatatcca
gtggatagtcgtaactataatcacggagatacctatatatactcagtgga
tcacaaaatataccaaaaaatgatgaatattggaagacatattagtggag
tgggttttggaagagatgggatgtctaggcaattatttattatacacata
tatgaaaatatcaaagagaaaatttgactaataattatattaattttatt
ttattttgaaatgcatataaattattattaaaaacttataaaatatcaca
tattcaaattaatcagaggcaaggtctgtacatatcaatgaacttgtata
caatttgaataatcaattggaccaaaagttgtggaaagtcacattaaatt
ttaaaccttcagtttggaatatattttatacatctatccacttttaattt
ttttttatttttttatttttatttttttagttttttttttcattttttat
taggtatttagctcatttacatttccaatgctatgccaaaagtcccccat
acccacccacccctactcccctacccacccactcccactttttggccctg
gcgttcccctgtactggggcatataaagttgcatgtccaatgggcctctc
tttccagtgatggccaactagg
gaattcagtttctagtaacccagtaggacagttcacaactgtttgtgaca
aaaattagaggggatctggaacacttctctgtccttcatggatacctacc
tgaactgactatattccaacacacacacacacacacacacacacacacac
aaaagaaataaaagtttccaaaataaatgtaaatttattatcaattatta
atacgtggatagtaagtagcccaaaagttcagactaatgcagatacagtt
tacagacaatatgaagcccaagaagaaaaaagaccaaaatgtggatgctt
cagtgcttttttagaagggggaacaaaatagtcacaggacaaaatatgga
gacaaagtttggagcagagactgaaggaaaggccatccacccgactgttc
cacctggggatttatcccatatacagttaccaaacacagatggactctat
tgtggatgtcaacaagaacttactgacaggatcctgatatagctgtcttc
agagaggctctgccagagcctgacttatacagaggtgggtgctctcagat
cattggatgagcacagggttcccaatagaggagttagagaaaggactgaa
ggagttgaagggtttttaacaccataggaagaacagcaatatgaaacaac
cagtaccccagacctcccagtgactaaaccaacaaccaaagagtacacat
ggagcgacccattgctctagctgcatatgtagcagaggatggcctttctg
ggtatctttgggagaagaggtccttggttctgtgaaggtttgatgctcca
gtgtaggggaattccagggtggggaggtgggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111042198_111042871
seq2: B6Ng01-306E06.b_43_714

seq1  GAATTCATCATCTTCAGTTTTTTACCAATTTTTGAGTACAACAATATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATCTTCAGTTTTTTACCAATTTTTGAGTACAACAATATCCA  50

seq1  GTGGATAGTCGTAACTATAATCACGGAGATACCTATATATACTCAGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATAGTCGTAACTATAATCACGGAGATACCTATATATACTCAGTGGA  100

seq1  TCACAAAATATACCAAAAAATGATGAATATTGGAAGACATATTAGTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAATATACCAAAAAATGATGAATATTGGAAGACATATTAGTGGAG  150

seq1  TGGGTTTTGGAAGAGATGGGATGTCTAGGCAATTATTTATTATACACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTGGAAGAGATGGGATGTCTAGGCAATTATTTATTATACACATA  200

seq1  TATGAAAATATCAAAGAGAAAATTTGACTAATAATTATATTAATTTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAATATCAAAGAGAAAATTTGACTAATAATTATATTAATTTTATT  250

seq1  TTATTTTGAAATGCATATAAATTATTATTAAAAACTTATAAAATATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGAAATGCATATAAATTATTATTAAAAACTTATAAAATATCACA  300

seq1  TATTCAAATTAATCAGAGGCAAGGTCTGTACATATCAATGAACTTGTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAATTAATCAGAGGCAAGGTCTGTACATATCAATGAACTTGTATA  350

seq1  CAATTTGAATAATCAATTGGACCAAAAGTTGTGGAAAGTCACATTAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGAATAATCAATTGGACCAAAAGTTGTGGAAAGTCACATTAAATT  400

seq1  TTAAACCTTCAGTTTGGAATATATTTTATACATCTATCCACTTTTAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCTTCAGTTTGGAATATATTTTATACATCTATCCACTTTTAATTT  450

seq1  TTTTTTATTTTTTTATTTTTATTTTTTTAGTTTTTTTTTTCATTTTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTTTTTTATTTTTATTTTTTTAGTTTTTTTTTTCATTTTTTAT  500

seq1  TAGGTATTTAGCTCATTTACATTTCCAATGCTATGCCCAAAAGTCCCCCA  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGGTATTTAGCTCATTTACATTTCCAATGCTATG-CCAAAAGTCCCCCA  549

seq1  TACCCACCCACCCCTACTCCCCTACCCACCCACTCCCACTTTTTGGCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCCACCCCTACTCCCCTACCCACCCACTCCCACTTTTTGGCCCT  599

seq1  GGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTC  650
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGCGTTCCCCTGTACTGGGGCATATAAAG-TTGCATGTCCAATGGGCCTC  648

seq1  TCTTTCCAGTGATGGCCAACTAGG  674
      ||||||||||||||||||||||||
seq2  TCTTTCCAGTGATGGCCAACTAGG  672