BAC Information

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BAC

Clone NameB6Ng01-308A11
Chromosome14 (Build37)
Map Location 23,021,228 - 23,182,045
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068, Kcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308A11.bB6Ng01-308A11.g
ACCGA100636GA100637
length1,081613
definitionB6Ng01-308A11.b B6Ng01-308A11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,180,969 - 23,182,045)(23,021,228 - 23,021,834)
sequence
gaattctaattcacattgctcagtgcacggtctgtgcttgtgataaggga
acttgccaggggagagaggaaaggaaataatgcaagccgtcagctgtgct
tggcttcactgactgtgccatgctacatgtgggtcttctggaggcgttga
accactccagaccagaggtgggacaaagtggggaatgaggaacacagatc
caccgtggaaatgagccccactgccctccatggccttcagttctctccct
tgtaagaggactgaactagaacttagtgccttaaatgcacacacatacag
atgtactactattgcaccttccctctgactgttggaggtgcatctgtctg
cgttgcagtcttcttagtcctaaattgaaagaatggtgtagaggactttg
agtcaacatcaaccaagaagctcccaggggacaagagaaatcaggcagta
ctcatgaaacagataatatgcaccacaagaacaccccaggaacacacagg
aggagcgggagatgttatcagttgatttctatgcttgatgaagattctac
agtctcgaactcggtgggagttggttgctgcctgtccctaaaggtgagaa
catagttgcggggagaccaagggggcatggttgaatttaaaactcatcta
catctcctcaaacataggggcttaggatgttttttgaaaatctcgtaccc
acaaggctatctccactaaacgtcttaaatagaattatcaatctgggaat
ccttaggagcaagtcagtacaaatacccatgcatcacaacacagatagcc
atgcataacagcgggaggaagccattataggaaagcagtgtgttggacgg
ggacgtggctcagtgggtaaagtgctcatcacaggaacataaggatgtgg
attcagatccactgaatccacacaaagccagatgtgctagtgtgcaccag
tatccctatgatgagatgagaggcagaaaaaaaacaagacagtctctaga
agcttgcaggtcaaatattcctatcacacagaagcagtaaaaacggagaa
ggtctttgtatcaaacatggtaagggggtga
gaattccatatgaacttacagagactacaacagcacacacaagacccaca
caagttcaaaccagacaaaatcccaacacagaaacaaagtcccatttcta
accaagaagctatttacaattgatactggatggaaaaggggaaatcagtt
ttctctaatggtgtgtcacttggtatatgaacaacagcctggggcagctc
tatgcccaggagtagttgcctaacacaaaatatactctgtgggtttttgt
gtgtgtgtgtgtgtgtgttcctcctccttctcctcctcttcttcctcctc
ttcttcctcctcttcttctcctcctcttctgactcctcctcttcttcttc
tccttcttctccttcttctccttcttctccttcttctccttcttctttct
tcttctctcccccctttccccctccttttccattttggtcttattgattc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tctttctttcagtttggctggcttttttttttttgagagaagcatgaagt
tggtctggtaggatcttaggaggagttggaagaggggaaaatgatcaaaa
tatattgtataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23180969_23182045
seq2: B6Ng01-308A11.b_48_1128 (reverse)

seq1  TCACCCCC-TACCTTGTTTGATACAAAG--CCTCTCCTTTTTTACTGC-T  46
      |||||||| |||| ||||||||||||||  | ||||| |||||||||| |
seq2  TCACCCCCTTACCATGTTTGATACAAAGACCTTCTCCGTTTTTACTGCTT  50

seq1  CTGTGTGATAGG-ATATTGGACCTGCAAGCTTCTAGAGACTGTCTTGTTT  95
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  CTGTGTGATAGGAATATTTGACCTGCAAGCTTCTAGAGACTGTCTTGTTT  100

seq1  TTTTTCTGCCTCTCATCTCATCATAGGGATACTGGGTGCACACTAGCACA  145
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTTCTGCCTCTCATCTCATCATAGGGATACT-GGTGCACACTAGCACA  149

seq1  TCTGGCTTTGTGTGGATTCAGTGGATCTGAATCCACATCCTTATGTTCCT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTTTGTGTGGATTCAGTGGATCTGAATCCACATCCTTATGTTCCT  199

seq1  GTGATGAGCACTTTACCCACTGAGCCACGTCCCCGTCCAACACACTGCTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAGCACTTTACCCACTGAGCCACGTCCCCGTCCAACACACTGCTT  249

seq1  TCCTATAATGGCTTCCTCCCGCTGTTATGCATGGCTATCTGTGTTGTGAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAATGGCTTCCTCCCGCTGTTATGCATGGCTATCTGTGTTGTGAT  299

seq1  GCATGGGTATTTGTACTGACTTGCTCCTAAGGATTCCCAGATTGATAATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGTATTTGTACTGACTTGCTCCTAAGGATTCCCAGATTGATAATT  349

seq1  CTATTTAAGACGTTTAGTGGAGATAGCCTTGTGGGTACGAGATTTTCAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAAGACGTTTAGTGGAGATAGCCTTGTGGGTACGAGATTTTCAAA  399

seq1  AAACATCCTAAGCCCCTATGTTTGAGGAGATGTAGATGAGTTTTAAATTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCCTAAGCCCCTATGTTTGAGGAGATGTAGATGAGTTTTAAATTC  449

seq1  AACCATGCCCCCTTGGTCTCCCCGCAACTATGTTCTCACCTTTAGGGACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGCCCCCTTGGTCTCCCCGCAACTATGTTCTCACCTTTAGGGACA  499

seq1  GGCAGCAACCAACTCCCACCGAGTTCGAGACTGTAGAATCTTCATCAAGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAACCAACTCCCACCGAGTTCGAGACTGTAGAATCTTCATCAAGC  549

seq1  ATAGAAATCAACTGATAACATCTCCCGCTCCTCCTGTGTGTTCCTGGGGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATCAACTGATAACATCTCCCGCTCCTCCTGTGTGTTCCTGGGGT  599

seq1  GTTCTTGTGGTGCATATTATCTGTTTCATGAGTACTGCCTGATTTCTCTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTGGTGCATATTATCTGTTTCATGAGTACTGCCTGATTTCTCTT  649

seq1  GTCCCCTGGGAGCTTCTTGGTTGATGTTGACTCAAAGTCCTCTACACCAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCTGGGAGCTTCTTGGTTGATGTTGACTCAAAGTCCTCTACACCAT  699

seq1  TCTTTCAATTTAGGACTAAGAAGACTGCAACGCAGACAGATGCACCTCCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAATTTAGGACTAAGAAGACTGCAACGCAGACAGATGCACCTCCA  749

seq1  ACAGTCAGAGGGAAGGTGCAATAGTAGTACATCTGTATGTGTGTGCATTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAGAGGGAAGGTGCAATAGTAGTACATCTGTATGTGTGTGCATTT  799

seq1  AAGGCACTAAGTTCTAGTTCAGTCCTCTTACAAGGGAGAGAACTGAAGGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACTAAGTTCTAGTTCAGTCCTCTTACAAGGGAGAGAACTGAAGGC  849

seq1  CATGGAGGGCAGTGGGGCTCATTTCCACGGTGGATCTGTGTTCCTCATTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGGCAGTGGGGCTCATTTCCACGGTGGATCTGTGTTCCTCATTC  899

seq1  CCCACTTTGTCCCACCTCTGGTCTGGAGTGGTTCAACGCCTCCAGAAGAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTGTCCCACCTCTGGTCTGGAGTGGTTCAACGCCTCCAGAAGAC  949

seq1  CCACATGTAGCATGGCACAGTCAGTGAAGCCAAGCACAGCTGACGGCTTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGTAGCATGGCACAGTCAGTGAAGCCAAGCACAGCTGACGGCTTG  999

seq1  CATTATTTCCTTTCCTCTCTCCCCTGGCAAGTTCCCTTATCACAAGCACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTCCTTTCCTCTCTCCCCTGGCAAGTTCCCTTATCACAAGCACA  1049

seq1  GACCGTGCACTGAGCAATGTGAATTAGAATTC  1077
      ||||||||||||||||||||||||||||||||
seq2  GACCGTGCACTGAGCAATGTGAATTAGAATTC  1081

seq1: chr14_23021228_23021834
seq2: B6Ng01-308A11.g_66_678

seq1  GAATTCCATATGAACTTACAGAGACTACAACAGCACACACAAGACCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGAACTTACAGAGACTACAACAGCACACACAAGACCCACA  50

seq1  CAAGTTCAAACCAGACAAAATCCCAACACAGAAACAAAGTCCCATTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCAAACCAGACAAAATCCCAACACAGAAACAAAGTCCCATTTCTA  100

seq1  ACCAAGAAGCTATTTACAATTGATACTGGATGGAAAAGGGGAAATCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAAGCTATTTACAATTGATACTGGATGGAAAAGGGGAAATCAGTT  150

seq1  TTCTCTAATGGTGTGTCACTTGGTATATGAACAACAGCCTGGGGCAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAATGGTGTGTCACTTGGTATATGAACAACAGCCTGGGGCAGCTC  200

seq1  TATGCCCAGGAGTAGTTGCCTAACACAAAATATACTCTGTGGGTTTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCAGGAGTAGTTGCCTAACACAAAATATACTCTGTGGGTTTTTGT  250

seq1  GTGTGTGTGTGTGTGTGTTCCTCCTCCTTCTCCTCCTCTTCTTCCTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTTCCTCCTCCTTCTCCTCCTCTTCTTCCTCCTC  300

seq1  TTCTTCCTCCTCTTCTTCTCCTCCTCTTCTTCCTCCTCCTCTTCTTCTTC  350
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  TTCTTCCTCCTCTTCTTCTCCTCCTCTTCTGACTCCTCCTCTTCTTCTTC  350

seq1  TCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTTTCT  400

seq1  TCTTCTCTCCCCCCTTTCCCCCTCCTTTTCCATTTTGGTCTTATTGA---  447
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  TCTTCTCTCCCCCCTTTCCCCCTCCTTTTCCATTTTGGTCTTATTGATTC  450

seq1  -TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  496
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  500

seq1  TCTTTCTTTCAGTTTGGCTGGCTTTTTTTTTTTTGAGAG-AGCATGAAGT  545
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTTTCTTTCAGTTTGGCTGGCTTTTTTTTTTTTGAGAGAAGCATGAAGT  550

seq1  TGGTCTGGTAGGATC-TAGGAGGAGTTGGAAGAGGGGAAAATGATCAAAA  594
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGGTCTGGTAGGATCTTAGGAGGAGTTGGAAGAGGGGAAAATGATCAAAA  600

seq1  TATATTGTATAAA  607
      |||||||||||||
seq2  TATATTGTATAAA  613