BAC Information

Click to search

BAC

Clone NameB6Ng01-309D17
Chromosome14 (Build37)
Map Location 114,288,250 - 114,288,775
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510
Downstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309D17.bB6Ng01-309D17.g
ACCGA101524GA101525
length760522
definitionB6Ng01-309D17.b B6Ng01-309D17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacagaaaaagtgggtataaccttgttttgtttctgatttcaa
tgggattgacttttaatttctctccatttaaattgatattagtgtggtga
ttcaaatagaaatgctccccatactaaatggcactaattggaagtgtggc
attgttggagaaattgtggtcttgttagaggaagtgtgtcactaggggag
caagcttttaggcttcttatgctcattctatgcccagtatgccacagcat
ccctttctactgcctacagatacaaatgtagaactctcagcgccttcttc
aacatcatgtctgtctggatgctgccatgcttcccaccataatgacaatg
gactaaacatctgaagctgtaagccagcattagtcaagtttttgctttat
aaggaaaaacttcctttgctgatggtgtctttttccaaaaataaaagccc
aagagagaagttggtactagggactgggctattgttgtgatggattagat
tgtttggagggaggtggattaagaaagcaatggaatgctttaagacaacc
ttaatgggctgtactagtagaactatagaagactgagggtgatctgaact
ttcaggggcctggcccaagaggtttcagaaggaaaaaaaaaaataagtat
attggcctagagatttttcctgtaatatttttggtgactaatgtggcctc
tttttgcccttgttccaagagtcaaaaaaaaaagacacagatgaaaaagg
tataatacaa
ctagattatctagaaaaaagagggaagggtggagggagggagggaagatg
agagagagagagagagagagagagagagagagagagagagagagagagag
agagagagagagaaagagagagacagagacagaaagatacagagagaatg
aagagcttagtatgaagatgaccagataggatttagtcagagaagcaggt
agtgagtgaaaaagatcaatatacattatgtgaattcattaaacatttaa
taagagattatatttaaaaacagaattactatacacacattttcaacatc
cgtgggatatgatgagagaggactggctgataaattctgcttctacaaat
aaagtacatgtctgctacttctgaaattttattttattttttattatgca
ataacatagaagattttttctcatcaatgtgactcatatccagaattcct
aaatcaattgtcatgtatttttgttttaccatttgtaaataatttttata
ataaaaattttactgtacatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114288250_114288775
seq2: B6Ng01-309D17.g_67_594 (reverse)

seq1  CTATGTACAGT-AAATTTTTATTTTATAAATTATTTA-TAATGGTAAAAC  48
      ||||||||||| ||||||||||| || ||||||||||  |||||||||||
seq2  CTATGTACAGTAAAATTTTTATTATAAAAATTATTTACAAATGGTAAAAC  50

seq1  AAAAATACATGACAATTGATTTAGGAATTCTGAATTTGAGTCACATTGAT  98
      |||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  AAAAATACATGACAATTGATTTAGGAATTCTGGATATGAGTCACATTGAT  100

seq1  GAGATTATTTCTTCTATTTTATTACATAATAAAAAATAAAATAAAATTTC  148
      ||||  |  |||||||| ||||| ||||||||||||||||||||||||||
seq2  GAGAAAAAATCTTCTATGTTATTGCATAATAAAAAATAAAATAAAATTTC  150

seq1  AGAAGTAGCAGACATGTACTTTATTTGTAGAAGCAGAATTTATCAGCCAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAAGTAGCAGACATGTACTTTATTTGTAGAAGCAGAATTTATCAGCCAG  200

seq1  TCCTCTCTCATCATATCCCACGGATGTTGAAAATGTGTGTTTTGTATTTC  248
      |||||||||||||||||||||||||||||||||||||||| | ||| |||
seq2  TCCTCTCTCATCATATCCCACGGATGTTGAAAATGTGTGTATAGTAATTC  250

seq1  TGTTTTTAAATATAATCTCTTATTAAATGTTTAATGAATTCACATAATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAAATATAATCTCTTATTAAATGTTTAATGAATTCACATAATGT  300

seq1  ATATTGATCTTTTTCACTCACTACCTGCTTCTCTGACTAAATCCTATCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGATCTTTTTCACTCACTACCTGCTTCTCTGACTAAATCCTATCTG  350

seq1  GTCATCTTCATACTATGCTCTTCATTCTCTCTGTATCTTTCTGTCTCTGT  398
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTCATCTTCATACTAAGCTCTTCATTCTCTCTGTATCTTTCTGTCTCTGT  400

seq1  CTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  450

seq1  CTCTCTCTCTCTCTCTCTCTCTCATCTTCCCTCCCTCCCTCCACCCTTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCATCTTCCCTCCCTCCCTCCACCCTTCC  500

seq1  CTCTTTTTTCTAGATAATCTAGGAATTC  526
      ||||||||||||||||||||||||||||
seq2  CTCTTTTTTCTAGATAATCTAGGAATTC  528