MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-309E05
Chromosome	14 (Build37)
Map Location	17,775,022 - 17,776,104
singlet/doublet	singlet
Overlap gene	none
Upstream gene	1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b, Rarb
Downstream gene	Tpi-rs9
Link	Open Mouse BAC browser

Click to get alignment info.

name	1700062C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73440 MGI:1920690
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC667209 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667209
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG435389 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435389 MGI:3644189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Oxsm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71147 MGI:1918397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ngly1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59007 MGI:1913276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Top2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21974 MGI:98791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rarb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218772 MGI:97857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpi-rs9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271171 MGI:98807
definition	gene_synonym : Tpi-9 note : triosephosphate isomerase related sequence 9 pseudo : _no_value

name	1700062C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265167 GeneID:73440 MGI:1920690
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700062C10 gene transcript_id : XM_001478820.1

name	Oxsm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353623 GeneID:71147 MGI:1918397
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-oxoacyl-ACP synthase, mitochondrial transcript_id : NM_027695.2

name	Ngly1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352411 GeneID:59007 MGI:1913276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-glycanase 1 transcript_id : NM_021504.3

name	Top2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328147 GeneID:21974 MGI:98791
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : topoisomerase (DNA) II beta transcript_id : NM_009409.2

name	Rarb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45593123 GeneID:218772 MGI:97857
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoic acid receptor, beta transcript_id : NM_011243.1

name	1700062C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265168 GeneID:73440 MGI:1920690
definition	codon_start : 1 product : hypothetical protein LOC73440 protein_id : XP_001478870.1

name	Oxsm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037235 CCDS:CCDS26831.1 GeneID:71147 MGI:1918397
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0004315 - 3-oxoacyl-[acyl-carrier protein] synthase activity [Evidence ISS] [Evidence IEA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006637 - acyl-CoA metabolism [Evidence ISS]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0051792 - medium-chain fatty acid biosynthesis [Evidence ISS]; GO:0051790 - short-chain fatty acid biosynthesis [Evidence ISS] codon_start : 1 product : 3-oxoacyl-ACP synthase, mitochondrial protein_id : NP_081971.1

name	Ngly1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981178 CCDS:CCDS26832.1 GeneID:59007 MGI:1913276
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000224 - peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : peptide:N-glycanase; peptide N-glycanase; peptide N-glycanase homolog product : N-glycanase 1 protein_id : NP_067479.2

name	Top2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328148 CCDS:CCDS26833.1 GeneID:21974 MGI:98791
definition	GO_component : GO:0005694 - chromosome [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]; GO:0006268 - DNA unwinding during replication [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP] codon_start : 1 product : topoisomerase (DNA) II beta protein_id : NP_033435.2

name	Rarb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45593124 CCDS:CCDS26834.1 GeneID:218772 MGI:97857
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0048048 - embryonic eye morphogenesis [Evidence IGI]; GO:0043065 - positive regulation of apoptosis [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001657 - ureteric bud development [Evidence IMP] codon_start : 1 note : RAR beta 2; RARbeta1/beta3; retinoic acid receptor beta 1/ beta 3 product : retinoic acid receptor, beta protein_id : NP_035373.1

name	LOC667209 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667209
definition	number : 1 pseudo : _no_value

name	LOC667209 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667209
definition	number : 2 pseudo : _no_value

name	EG435389 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435389
definition	number : 1 pseudo : _no_value

clone name	MSMg01-380F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-344B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-529I11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-062O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231O22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-421C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063C02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-309E05.b	B6Ng01-309E05.g
ACC	GA101548	GA101549
length	1,018	1,092
definition	B6Ng01-309E05.b	B6Ng01-309E05.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg tcaaatgctttttccgcatctaacgagatgatcatgtggtttttgtcttt gagtttgtttatataatggattacattgatggatttccgtatattaaacc agccatgcatccctggaataaaacctacttggtcaggatggatgattgct ttaatgtgtacttggattcggttagcgagaattttattgaagatttttta catctatattcataagggaaattggtctgaatttctctatctttgttgga tctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagtt gggaagagttccatctacttctattttgtggaatagtttatgcagaactg gaattagatcttctttgaaggtctggtagaactctgcactaaacccatct ggtcctgggcttttatttttttggctgggagactattaatgactgctact atttctttaggggatatgggattgtttagatcattaacttgatcctgatt taactttggtacctggtatctgtctagaaatttgtccatttcatccaggt tttccagttttgttgagtatagccttttgtagaaggatctgatggtgttt aggatttctccaggatctgttgttatgtctcccttttcatttctgatttt gttagttagggtgttgtccctgtgccctctagtgagtctagctaagggtt tatctatcttgtttattttctcaaagaaccaactcctcctttggttaatt ctttgaatatttcttcttgtttccacttgggttgatttcaccccggagtt tgattattcctgcccttctactccctcttgggtgaatttcttcctttttt ttctagagcttttagatgtgttgtcaagctgctagtgggtgtccttctag tttctttttagagggacaaaaagctataactttccctctagaaatgtctc attgtgctccccaaaggt	gaattccacttcctacagagtcatttattgagagacagaagcaattaata ttgaaaataaaataattgtgaacttctgaactaaattaccatgcatgcat aatgtagtgtcatgtcagtctttgaatgcttcccacattaggatctgtaa ggctggtctctaaactgcagcctcctccaactttagcatttctttcttct cccttttccagaaagagggtcccaagagtagcaaaaccattgttcaggat ttagaatatgtatccaggtttgggtttgggaatttgatgtgtagagttat gctatccactgataaatttataaaagaaagaaagaaaataagaagctaat gaagcatccctaggatcactgacaggaagaaatcgttttattgctcttta tttagcactgccatgatgagtatttggtaaatgagtcgcctattgacagg taccattgtacacctggtaattgtactgaaaacctcgagaattcagcttg taatgcaaagacagctcccaactgattatggttcaaacaactgatttctt tttgcctctgagatggggtaaagacagcagatacatggtagaaaacacac ttatgaatttgttctgttctgggctagtgatagtctctcgaaatgtttca tagcatccagtcacatctgttgtggatgggtctggtgctgtttgtatttt gatgctaattctgctctcctgggagggtttgcagacaaggaatgagtccc atgtactcagttgacttcttgtgagccaacccctaatgaataaaggaacc aatcactgttcaagtaggagggatttctgggttagatggaggaagagaga aagcaagagagagttaggtcccttttgcatggggatagacatgaagaaca tgttgtagctacaagtgtcttctgttttcaatggttggaaactgttcagg attttgccactggagatttagattttaataggcttacagatttaggattt tagtttctgtgcccaatgatttgatttttggagttttttgtcgtttcgaa cttatattcaatgcttgtcttctttcatgccacggcttgtcc
quality values	Open. Hide. 58 36 13 25 58 62 62 47 62 23 38 62 62 62 62 62 31 23 47 62 47 51 62 62 62 54 56 47 47 51 49 62 59 56 35 49 49 43 59 59 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 59 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 49 39 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 43 62 54 62 62 46 47 39 62 62 62 62 62 62 62 62 56 62 56 54 54 62 62 62 62 62 62 62 62 62 62 62 62 49 42 62 54 50 62 62 62 62 62 54 54 52 49 54 62 62 62 54 49 54 47 62 54 58 54 54 58 58 50 54 58 48 52 58 58 58 54 54 44 37 54 58 58 52 50 54 52 37 38 52 58 58 58 54 52 46 40 37 54 54 58 58 58 58 42 58 58 58 42 54 41 42 54 46 46 46 49 58 58 58 58 50 49 42 58 54 34 58 37 24 52 54 58 42 37 54 42 25 51 53 58 54 40 42 51 51 39 36 33 51 50 49 48 37 39 52 41 50 51 51 58 40 48 58 46 50 50 49 52 50 58 50 40 49 44 58 58 58 50 35 28 52 51 26 28 50 40 53 28 36 36 51 51 47 48 50 42 45 8 8 6 9 6 30 58 36 33 49 28 50 50 36 49 51 53 53 58 58 58 39 34 41 47 41 41 49 40 32 34 39 39 35 52 40 51 36 31 13 54 21 22 44 49 35 40 52 53 39 40 53 49 24 46 14 44 9 27 29 54 54 54 47 33 37 32 21 16 15 27 18 27 33 19 31 33 54 32 33 52 34 39 23 47 26 47 40 27 33 31 33 45 26 31 29 32 38 42 33 31 34 45 45 52 35 53 28 26 46 18 22 46 10 42 32 29 33 32 31 19 30 31 37 16 31 27 34 19 9 45 33 33 23 21 41 46 39 26 41 42 22 31 37 32 28 29 16 20 30 34 7 7 7 18 46 12 46 25 35 9 41 22 34 32 31 23 42 21 29 22 10 17 31 41 39 23 19 35 25 31 33 17 32 22 26 41 31 19 25 32 41 32 41 37 27 26 10 27 7 31 20 25 17 36 38 26 25 8 31 12 17 20 30 21 18 18 13 26 18 10 15 25 9 13 19 19 20 6 6 31 8 13 5 15 31 19 19 22 22 4 7 21 11 15 20 17 17 13 24 30 21 6 5 15 6 5 19 7 5 9 13 23 19 12 8 5 7 12 9 8 24 21 13 12 18 15 30 31 23 13 20 21 6 3 8 27 21 22 27 18 9 27 7 17 28 11 6 5 10 6 4 16 16 22 7 11 17 16 28 9 8	Open. Hide. 62 47 51 44 62 62 44 30 59 62 62 51 56 28 45 44 24 28 46 59 59 59 62 59 62 59 62 62 62 62 62 62 62 62 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 59 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 54 42 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 44 40 58 58 58 58 45 54 45 58 58 58 49 48 58 54 54 58 58 58 51 58 58 58 58 49 47 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 47 45 42 58 58 58 58 53 58 58 58 58 58 49 58 58 51 51 37 45 49 53 58 51 58 58 58 58 51 50 58 58 58 51 53 53 53 53 58 58 54 52 50 54 58 50 49 58 58 49 50 51 58 53 58 50 54 51 53 58 58 50 49 48 52 46 51 58 41 33 50 52 54 58 53 53 54 51 43 58 58 38 41 58 30 58 58 43 40 51 53 37 50 39 50 58 49 37 40 51 53 42 53 39 50 49 49 58 32 51 58 50 58 42 49 29 54 49 54 38 52 53 54 54 41 54 49 41 54 17 44 40 51 27 52 40 54 54 49 39 53 32 50 42 35 34 52 40 54 52 53 53 53 54 54 40 53 54 42 52 54 49 28 23 51 49 24 53 46 37 37 40 32 40 27 22 39 12 54 38 42 34 43 53 28 45 31 53 45 32 31 41 33 31 34 52 42 31 21 47 47 32 28 19 32 29 32 40 23 35 31 32 32 22 32 42 28 31 25 46 46 41 34 32 31 31 42 31 34 43 30 51 30 31 51 27 32 28 36 14 36 31 33 30 30 30 34 20 18 32 25 33 27 30 25 18 10 37 11 46 36 11 9 47 31 38 35 46 46 38 23 42 42 21 33 24 37 28 20 6 9 23 12 19 43 16 24 6 24 39 30 13 26 15 9 12 20 8 37 7 15 7 41 19 10 8 18 12 10 16 14 31 48 48 35 28 37 13 18 38 41 29 33 14 21 30 21 28 27 11 9 5 19 15 9 6 14 7 8 5 24 11 11 31 21 19 15 38 29 31 37 22 30 14 19 22 9 20 14 5 13 5 4 4 21 37 16 18 15 9 11 26 33 5 8 30 28 19 39 11 27 20 32 11 6 10 10 19 18 18 6 30 39 33 31 33 16 15 34 21 21 25 9 7 5 10 33 27 11 15 9 5 27 28 9 7 14 9 23 14 21 7 23 26 11 8 27 20 12 13 40 10 9 19 5 19 18 34 38 28 18 28 28 30 23 14 11 26 8 19 27 29 25 13 27 20 26 8 18 28 6 7 5 3 16 27 21 16 4 7 8 4 21 26 25 25 16 4 6 8 25 5 10 20 10 7 5 3 6 9 8 6 11 4 6 5 8 5 4 8 16 12 6 21 10 13 6 5 24 7 16 4 6 10 11 6 3 4 6 9 7 7 3 4 13 16 9 7 7 11 27

Alignment Information

BAC End 1

BAC End 2

seq1: chr14_17775022_17776104
seq2: B6Ng01-309E05.g_65_1156 (reverse)

seq1  GGACAAGCCGCTGCATGAAGGAAAACAA-CA-TGAA-CTTAGTTCAGAAA  47
      ||||||||||  ||||||| ||| |||| || ||||  | ||||| ||||
seq2  GGACAAGCCGTGGCATGAAAGAAGACAAGCATTGAATATAAGTTC-GAAA  49

seq1  CGAC-AAAAACTCAAAAACTC-AATCATTGGGCACAGAAACTAAAATCCT  95
      |||| |||||||| |||| || ||||||||||||||||||||||||||||
seq2  CGACAAAAAACTCCAAAAATCAAATCATTGGGCACAGAAACTAAAATCCT  99

seq1  AATCTTGTAAGCCTTATTAAATCTAAATCCTCCAGTGGC-AAATCCTG-A  143
      ||   |||||||||  | |||||||||| |||||||||| |||||||| |
seq2  AAATCTGTAAGCCTATTAAAATCTAAAT-CTCCAGTGGCAAAATCCTGAA  148

seq1  CAGTT--CCACCATTGAAACCAGGAGACACTTGTAGCTACACCTTG-TCT  190
      |||||  | |||||||||| ||| ||||||||||||||||| | || |||
seq2  CAGTTTCCAACCATTGAAAACAGAAGACACTTGTAGCTACAACATGTTCT  198

seq1  TCATGTCTATCCCCATGCAAAA-GGACCTAACTCTCTCCTGCTTTCTCTC  239
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  TCATGTCTATCCCCATGCAAAAGGGACCTAACTCTCTCTTGCTTTCTCTC  248

seq1  TTCCTCCATCTAACCCAGAAATCCCTCCTACTTGAACAGTGATTGGTTCC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCATCTAACCCAGAAATCCCTCCTACTTGAACAGTGATTGGTTCC  298

seq1  TTTATTCATTAGGGGTTGGCTCACAAGAAGTCAACTGAGTACATGGGACT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCATTAGGGGTTGGCTCACAAGAAGTCAACTGAGTACATGGGACT  348

seq1  CATTCCTTGTCTGCAAACCCTCCCAGGAGAGCAGAATTAGCATCAAAATA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTGTCTGCAAACCCTCCCAGGAGAGCAGAATTAGCATCAAAATA  398

seq1  CAAACAGCACCAGACCCATCCACAACAGATGTGACTGGATGCTATGAAAC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGCACCAGACCCATCCACAACAGATGTGACTGGATGCTATGAAAC  448

seq1  ATTTCGAGAGACTATCACTAGCCCAGAACAGAACAAATTCATAAGTGTGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCGAGAGACTATCACTAGCCCAGAACAGAACAAATTCATAAGTGTGT  498

seq1  TTTCTACCATGTATCTGCTGTCTTTACCCCATCTCAGAGGCAAAAAGAAA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACCATGTATCTGCTGTCTTTACCCCATCTCAGAGGCAAAAAGAAA  548

seq1  TCAGTTGTTTGAACCATAATCAGTTGGGAGCTGTCTTTGCATTACAAGCT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGTTTGAACCATAATCAGTTGGGAGCTGTCTTTGCATTACAAGCT  598

seq1  GAATTCTCGAGGTTTTCAGTACAATTACCAGGTGTACAATGGTACCTGTC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGAGGTTTTCAGTACAATTACCAGGTGTACAATGGTACCTGTC  648

seq1  AATAGGCGACTCATTTACCAAATACTCATCATGGCAGTGCTAAATAAAGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGCGACTCATTTACCAAATACTCATCATGGCAGTGCTAAATAAAGA  698

seq1  GCAATAAAACGATTTCTTCCTGTCAGTGATCCTAGGGATGCTTCATTAGC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAAACGATTTCTTCCTGTCAGTGATCCTAGGGATGCTTCATTAGC  748

seq1  TTCTTATTTTCTTTCTTTCTTTTATAAATTTATCAGTGGATAGCATAACT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTTCTTTCTTTCTTTTATAAATTTATCAGTGGATAGCATAACT  798

seq1  CTACACATCAAATTCCCAAACCCAAACCTGGATACATATTCTAAATCCTG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACATCAAATTCCCAAACCCAAACCTGGATACATATTCTAAATCCTG  848

seq1  AACAATGGTTTTGCTACTCTTGGGACCCTCTTTCTGGAAAAGGGAGAAGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGGTTTTGCTACTCTTGGGACCCTCTTTCTGGAAAAGGGAGAAGA  898

seq1  AAGAAATGCTAAAGTTGGAGGAGGCTGCAGTTTAGAGACCAGCCTTACAG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGCTAAAGTTGGAGGAGGCTGCAGTTTAGAGACCAGCCTTACAG  948

seq1  ATCCTAATGTGGGAAGCATTCAAAGACTGACATGACACTACATTATGCAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAATGTGGGAAGCATTCAAAGACTGACATGACACTACATTATGCAT  998

seq1  GCATGGTAATTTAGTTCAGAAGTTCACAATTATTTTATTTTCAATATTAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTAATTTAGTTCAGAAGTTCACAATTATTTTATTTTCAATATTAA  1048

seq1  TTGCTTCTGTCTCTCAATAAATGACTCTGTAGGAAGTGGAATTC  1083
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTGTCTCTCAATAAATGACTCTGTAGGAAGTGGAATTC  1092

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information