BAC Information

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BAC

Clone NameB6Ng01-309L09
Chromosome14 (Build37)
Map Location 26,767,988 - 26,768,834
singlet/doubletsinglet
Overlap geneCphx
Upstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e
Downstream gene1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309L09.bB6Ng01-309L09.g
ACCGA101884GA101885
length1,206857
definitionB6Ng01-309L09.b B6Ng01-309L09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggttgagaaccacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctacctcacaccagtcagaaaggctaagataaaaaattcaagtgacagc
agatgctggagaggatgtggagaaagaggaacactcctccattattggtg
ggattgcaagcttgtacaaccactctgtaaatcagtctggcggttcctta
gaaaattggacatagtactaccggaggatcccacaatatgtctcctgggc
atatatccagaagatgttccaactggtaataaggacacatgctccactat
gttcatagcagccttatttataatagccagaacctggaaagaactcatat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagcaattaaaaacaatgaatatcatcctgaatgaggtaa
cccaatcacaaaagaactcacttgatatgtattcactgataagtggatat
tagcccagaaacttaaattacccaagatacaatttgtaaaacacatgtaa
acaagaagaatgaagaccaaaatgtggacacttcaccccttcttagaatt
gggaacaaaacacccatggaaggaattacaaagtttggagctgagacaaa
aggatggaccatccagaaactgctgcacccagggatccatcccataatca
gccaacaaatgcagacacaccagcaagattttgctgagccaggcgtggtg
gcgcacgcctttaatcccagcactcggaaggcagaggcaggtggatttct
gagttcaaggccagcctggtctataaagtgagttccaggacagccaggac
tacacagagaaaccctgtctcgaaaaaccaaaaaaacaaaacaaaagatt
ttgctgaaaggacctgatatatctgtctcttgtgaggctatgccagtgcc
tggcaaacacagaagtggatgctcacagtcagctatggatggaacacagg
tcccatgaggagctagagaaagtacccaagagctaagggatctgcaccta
ataggtggacaacaatattgacctaacgagtacctagagcctagttctct
aagccgcatatgtaggcagaaaagattggacctaggccagagtcatatca
taatga
gaattctctgtagccaagcaagccttgcttctcctcttgcttcttctgga
acagctgggactgtagggcagcacccccagccctggctgtctctgttctt
tgttattcagttaatgtgcagttgttcttgaatgccttgaacagtctcag
tcttggctaattgattattctgttcctgggctcctccagattttatacag
atttgtattgccagagattgacctggtcagctttgggcttgtacatgttt
tttttttttttttttttttggatgtacttaaagatttatagggggtgatg
gtggcctgtgcctttaatcccagctttggtagcagaggcaggtggatctc
ttgagttcaagcctagcctagtccaggacagccaagactacacagagaaa
ccctgtcaacaaagaaagacatatttattgactatgtatgaatgctttga
ctgcatgtgtgcttgtgcaccacatgcatgcctatggatggttgtgagct
accacttgagcactgggaacttgttagacctgacgaaaacatctccacaa
ctgtctgattaagcaaactttattttagactggccagttggctgcctctc
ccaaagtttcagagagcagcccctcactgacttggggtcccttttatggg
gaagagttagggttgaatgaaaacagctttcagattaatttggctgttag
taccccagacagaagaatgggggactctgggcttcaagactgtctgtggg
gtagatttgtgcaagaattcatttatgtgaaaggtatctgggaaagacac
attttcctaaggcaaaagggctatcatcatatcccaggttcaaggagttt
ttacaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26767988_26768834
seq2: B6Ng01-309L09.g_65_921

seq1  GAATTCTCTGTAGCCAAGCAAGCCTTGCTTCTCCTCTTGCTTCTTCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTAGCCAAGCAAGCCTTGCTTCTCCTCTTGCTTCTTCTGGA  50

seq1  ACAGCTGGGACTGTAGGGCAGCACCCCCAGCCCTGGCTGTCTCTGTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGGGACTGTAGGGCAGCACCCCCAGCCCTGGCTGTCTCTGTTCTT  100

seq1  TGTTATTCAGTTAATGTGCAGTTGTTCTTGAATGCCTTGAACAGTCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTCAGTTAATGTGCAGTTGTTCTTGAATGCCTTGAACAGTCTCAG  150

seq1  TCTTGGCTAATTGATTATTCTGTTCCTGGGCTCCTCCAGATTTTATACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCTAATTGATTATTCTGTTCCTGGGCTCCTCCAGATTTTATACAG  200

seq1  ATTTGTATTGCCAGAGATTGACCTGGTCAGCTTTGGGCTTGTACATGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTGCCAGAGATTGACCTGGTCAGCTTTGGGCTTGTACATGTTT  250

seq1  TTTTTTTTTTTTTTTTTTTGGATGTACTTAAAGATTTATAGGGGGTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTGGATGTACTTAAAGATTTATAGGGGGTGATG  300

seq1  GTGGCCTGTGCCTTTAATCCCAGCTTTGGTAGCAGAGGCAGGTGGATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTGTGCCTTTAATCCCAGCTTTGGTAGCAGAGGCAGGTGGATCTC  350

seq1  TTGAGTTCAAGCCTAGCCTAGTCCAGGACAGCCAAGACTACACAGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTCAAGCCTAGCCTAGTCCAGGACAGCCAAGACTACACAGAGAAA  400

seq1  CCCTGTCAACAAAGAAAGACATATTTATTGACTATGTATGAATGCTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCAACAAAGAAAGACATATTTATTGACTATGTATGAATGCTTTGA  450

seq1  CTGCATGTGTGCTTGTGCACCACATGCATGCCTATGGATGGTTGTGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTGTGCTTGTGCACCACATGCATGCCTATGGATGGTTGTGAGCT  500

seq1  ACCACTTGAGCACTGGGAACTTGTTAGACCTGACGAAAACATCTCCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTGAGCACTGGGAACTTGTTAGACCTGACGAAAACATCTCCACAA  550

seq1  CTGTCTGATTAAGCAAACTTTA-TTTAGACTGGCCAGTTGGCTGCCTCTC  599
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGTCTGATTAAGCAAACTTTATTTTAGACTGGCCAGTTGGCTGCCTCTC  600

seq1  CCAAAGTTTCAGAGAGCAGCCCCTCACTGACTTGGGGTCCCTTTTATGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTTCAGAGAGCAGCCCCTCACTGACTTGGGGTCCCTTTTATGGG  650

seq1  GAAGAGTTAGGGTTGAATGAAAACAGCTTTCAGATTAA-TTGGCTGTTAG  698
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAAGAGTTAGGGTTGAATGAAAACAGCTTTCAGATTAATTTGGCTGTTAG  700

seq1  TA-CCCAGACAGAAGAATGGGGGACTCTGGGC-TCAAGACTGTCTGTGGG  746
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TACCCCAGACAGAAGAATGGGGGACTCTGGGCTTCAAGACTGTCTGTGGG  750

seq1  GTAGATTAGTGCAAG-ACTCA-TTATGTGAAAGGTATCT-GGTAAGACAC  793
      ||||||| ||||||| | ||| ||||||||||||||||| || |||||||
seq2  GTAGATTTGTGCAAGAATTCATTTATGTGAAAGGTATCTGGGAAAGACAC  800

seq1  A-TTTCATAAGGCAAAAGGGCTATCATCATATCACAGGTTC-AGGAG-TT  840
      | |||| |||||||||||||||||||||||||| ||||||| ||||| ||
seq2  ATTTTCCTAAGGCAAAAGGGCTATCATCATATCCCAGGTTCAAGGAGTTT  850

seq1  TAACAAG  847
      | |||||
seq2  TTACAAG  857