BAC Information

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BAC

Clone NameB6Ng01-309P17
Chromosome14 (Build37)
Map Location 109,851,603 - 109,993,969
singlet/doubletdoublet
Overlap geneLOC640892
Upstream geneEG668761, Slitrk1
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309P17.bB6Ng01-309P17.g
ACCGA102088GA102089
length486852
definitionB6Ng01-309P17.b B6Ng01-309P17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,993,478 - 109,993,969)(109,851,603 - 109,852,446)
sequence
tccttgtaaaactttgtaattggacatgcccctgacaaacatcatcaagt
gaagggatataaattattactaagggaaccattcttcctgaagtcatgct
gtagacttagatgccaattagtgtttattaataattattacactaatcaa
ctcacatagaaaaatacatataaatattaatgttgtatttaaaatttcaa
catgaagtgaaacaaaaggcaaaagtcagtcatatccacatgcaaatcac
ccatttcatgccctgtgctgagatgatgacacttatgtttactgtatttc
cttcttaaacacatacctcacatgggccgctgagacacccccttcccatg
tccaatgcatacaataggctagctactctaggcactaatcctgtcgtcaa
aaacacacatggaactcatgtcctcctcctatacagaatacggtctgaaa
tgacaatgtggtggtggtggtgctggtggtggtggt

gaattctttatatgttttcaatatttgctctctccactatgtctatgctt
tatatgtataaaatttaaatctctctctctctctctctctctctctctat
atatatatatatatatatatatatgatttttctctttgtctctgtctctc
tcactatgtatataggtaggtaggtagatagatagatagatagaagatat
ataggtatatatccatgtaactttgatttaattctcatttaaagaaatat
acatctaataaaagcacaggtgtcttttaaactactaccatgtgatttac
aaaatcaggtatatttaataatcaagattgaaaaactcgagctggtcatg
ggggtggacgcctttaatcccagcacttgggaggcagaggtaggcatatt
tctgagttcaaagccagccagagtgagttcctggacagccagggctatac
agagaaaccctgtctcaaaaaacaaacaaacaaacaaaacaaaaccaaaa
caaaaagaacaaaaaaccaaaacccaaaagaacaacaacaacaacaacaa
acagaaaggaagaaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaaaggaaggaagaagaaaggaagaaagaaagaaataaa
gaaagaaagaaagaaagagaaaggaaggaaggaaggaaaaaggaaggaag
gaagaaggaagaaagaaagaaaggaagaaagaaagaaaaacgaaggaagg
aaggaaggaaaaaggagaaagaaagaagaagaagaatgagagaacgaaag
aaagaaagagaaagggaggaaaggaaggaaaaatgaatgaaggaagtaat
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109993478_109993969
seq2: B6Ng01-309P17.b_47_538 (reverse)

seq1  ACCACCACCACCAGCACCACCACCACCACATTGTCATTTCAGACCGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACCACCAGCACCACCACCACCACATTGTCATTTCAGACCGTATT  50

seq1  CTGTATAGGAGGAGGACATGAGTTCCATGTGTGTTTTTGACGACAGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATAGGAGGAGGACATGAGTTCCATGTGTGTTTTTGACGACAGGATT  100

seq1  AGTGCCTAGAGTAGCTAGCCTATTGTATGCATTGGACATGGGAAGGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTAGAGTAGCTAGCCTATTGTATGCATTGGACATGGGAAGGGGGT  150

seq1  GTCTCAGCGGCCCATGTGAGGTATGTGTTTAAGAAGGAAATACAGTAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGCGGCCCATGTGAGGTATGTGTTTAAGAAGGAAATACAGTAAAC  200

seq1  ATAAGTGTCATCATCTCAGCACAGGGCATGAAATGGGTGATTTGCATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGTCATCATCTCAGCACAGGGCATGAAATGGGTGATTTGCATGTG  250

seq1  GATATGACTGACTTTTGCCTTTTGTTTCACTTCATGTTGAAATTTTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGACTGACTTTTGCCTTTTGTTTCACTTCATGTTGAAATTTTAAAT  300

seq1  ACAACATTAATATTTATATGTATTTTTCTATGTGAGTTGATTAGTGTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTAATATTTATATGTATTTTTCTATGTGAGTTGATTAGTGTAAT  350

seq1  AATTATTAATAAACACTAATTGGCATCTAAGTCTACAGCATGACTTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTAATAAACACTAATTGGCATCTAAGTCTACAGCATGACTTCAGG  400

seq1  AAGAATGGTTCCCTTAGTAATAATTTATATCCCTTCACTTGATGATGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGTTCCCTTAGTAATAATTTATATCCCTTCACTTGATGATGTTT  450

seq1  GTCAGGGGCATGTCCAATTACAAAGTTTTACAAGGAGAATTC  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGGCATGTCCAATTACAAAGTTTTACAAGGAGAATTC  492


seq1: chr14_109851603_109852446
seq2: B6Ng01-309P17.g_69_914

seq1  GAATTCTTTATATGTTTTCAATATTTGCTCTCTCCACTATGTCTATGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATATGTTTTCAATATTTGCTCTCTCCACTATGTCTATGCTT  50

seq1  TATATGTATAAAATTTAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  100
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATATGTATAAAATTTAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTAT  100

seq1  ATATATATATATATATATATATATGATTTTTCTCTTTGTCTCTGTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATGATTTTTCTCTTTGTCTCTGTCTCTC  150

seq1  TCACTATGTATATAGGTAGGTAGGTAGATAGATAGATAGATAGAAGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGTATATAGGTAGGTAGGTAGATAGATAGATAGATAGAAGATAT  200

seq1  ATAGGTATATATCCATGTAACTTTGATTTAATTCTCATTTAAAGAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTATATATCCATGTAACTTTGATTTAATTCTCATTTAAAGAAATAT  250

seq1  ACATCTAATAAAAGCACAGGTGTCTTTTAAACTACTACCATGTGATTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAATAAAAGCACAGGTGTCTTTTAAACTACTACCATGTGATTTAC  300

seq1  AAAATCAGGTATATTTAATAATCAAGATTGAAAAACTCGAGCTGGTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGGTATATTTAATAATCAAGATTGAAAAACTCGAGCTGGTCATG  350

seq1  GGGGTGGACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGTAGGCATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGTAGGCATATT  400

seq1  TCTGAGTTCAAAGCCAGCCAGAGTGAGTTCCTGGACAGCCAGGGCTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTCAAAGCCAGCCAGAGTGAGTTCCTGGACAGCCAGGGCTATAC  450

seq1  AGAGAAACCCTGTCTCAAAAAACAAACAAACAAACAAAACAAAACCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCCTGTCTCAAAAAACAAACAAACAAACAAAACAAAACCAAAA  500

seq1  CAAAAAGAACAAAAAACCAAAACCCAAAAGAACAACAACAACAACAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAACAAAAAACCAAAACCCAAAAGAACAACAACAACAACAACAA  550

seq1  ACAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  600

seq1  AAGAAAGAAAG-AAAGGAAGGAAGAAGAAAGGAAGAAAGAAAGAAAGAAA  649
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  AAGAAAGAAAGAAAAGGAAGGAAGAAGAAAGGAAGAAAGAAAGAAATAAA  650

seq1  GAAAGAAAGAAAGAAAGAGAAAGGAAGGAAGGAAGGAAAAAGGAAGGAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAGAAAGGAAGGAAGGAAGGAAAAAGGAAGGAAG  700

seq1  GAAGAAGGAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAAAGGAAGGAAGG  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAGAAGGAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAAACGAAGGAAGG  750

seq1  AAGGAAGGAAAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAG  799
      ||||||||||||||| |||||||||| |||||   ||||| ||||||| |
seq2  AAGGAAGGAAAAAGG-AGAAAGAAAG-AAGAA--GAAGAATGAGAGAACG  796

seq1  AAAGAAAGAAAGAGAAAGGAAGG-AAGGAAGGAAAAAGGAAGGAAG----  844
      ||||||||||||||||||| ||| ||||||||||||| ||| ||||    
seq2  AAAGAAAGAAAGAGAAAGGGAGGAAAGGAAGGAAAAATGAATGAAGGAAG  846


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