BAC Information

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BAC

Clone NameB6Ng01-311D06
Chromosome14 (Build37)
Map Location 113,224,743 - 113,357,208
singlet/doubletdoublet
Overlap geneLOC100043509
Upstream geneLOC100043501, EG223186
Downstream geneTpm3-rs7, LOC100043510, LOC382947
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311D06.bB6Ng01-311D06.g
ACCGA102979GA102980
length1,103253
definitionB6Ng01-311D06.b B6Ng01-311D06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,224,743 - 113,225,859)(113,356,957 - 113,357,208)
sequence
gaattcattattatcttctaacataatgtaatcagctgcttcaggatttt
ttttcccctgacttgaagtcaaatggattgtatcttgaactgtgagctaa
agtagctcttttttttttccttaaattgtttttgtcagagtgttactgta
agaggaaaaaaaggctcagatgtccagccacatgctagcaaacacaatac
cattaagctacacttccacctgattcttttttttttttaattgaacatca
tacttatggttccactgtacaaatcagtactggtaattttactccaagct
tacattgattatgtattttacataatggtcaaatctttcctttaatgtaa
ctttttattaaggagtccgtattttctgataccactttttttatgctgac
tattgtcattacttcgatcatcattacttcacaaatatttttttttcaaa
gatttttaaccatatgaattacgagaaaatttactcatttattctcacta
ttatgcattgcttgcctatgttccactaaaatgggaatattacaaaactg
ggtaaatgtatctgttttatttgctaatgagctgagagaaatagctcatg
aagtctattagcacaggttcgaggtaattttctctttgtaacacagagac
cttacaatgtggtcatatctaccttttgaaagccatacatcacatcttgt
atgtcatatcaggtgggtactagagtatttgaaaacaaatcaaagaaaat
agaactgattaaattattttttaaaagtaccaagatacaaaattaaactg
accagaattgtttatcatggatgtgaaattgtgacttaaaatcaatactg
aagtcaaagaaagaaatgagcgaaggataaaatgggattttacatctaaa
ggcatgtttcatttctattcagtggagctgaagtcagtacttttagatta
tttaagttgcaaccaagtgtaaagaaacatattaaacttcaccagaacaa
acatgtactactaccacaatgagcagcagtctttccagctgtgtgcagat
ctagctctctctttatggaaaaaaaatgtgatccacaaaaacctagcagt
aca
ctattctttctcctatctggtaacagttctaagctgatttcaggctataa
ccatttctgatggtttgtatagttttggggtttttttctcttttctattg
ttattgttgggtttttttgtttgtttgtttgtttttgtttttgttttgag
aaggagaaggatgggaaccactaattttccaaagatcattggtcaagata
tccactaagtttgaaacaaggtactttcagttcagactgcactttctcag
cat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113224743_113225859
seq2: B6Ng01-311D06.b_48_1150

seq1  GAATTCATTATTATCTTCTAACATAATGTAATCAGCTGCTTCAGGATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATTATCTTCTAACATAATGTAATCAGCTGCTTCAGGATTTT  50

seq1  TTTTCCCCTGACTTGAAGTCAAATGGATTGTATCTTGAACTGTGAGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCTGACTTGAAGTCAAATGGATTGTATCTTGAACTGTGAGCTAA  100

seq1  AGTAGCTCTTTTTTTTTTCCTTAAATTGTTTTTGTCAGAGTGTTACTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTCTTTTTTTTTTCCTTAAATTGTTTTTGTCAGAGTGTTACTGTA  150

seq1  AGAGGAAAAAAAGGCTCAGATGTCCAGCCACATGCTAGCAAACACAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAAAAAGGCTCAGATGTCCAGCCACATGCTAGCAAACACAATAC  200

seq1  CATTAAGCTACACTTCCACCTGATTCTTTTTTTTTTTTAATTGAACATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGCTACACTTCCACCTGATTCTTTTTTTTTTTTAATTGAACATCA  250

seq1  TACTTATGGTTCCACTGTACAAATCAGTACTGGTAATTTTACTCCAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATGGTTCCACTGTACAAATCAGTACTGGTAATTTTACTCCAAGCT  300

seq1  TACATTGATTATGTATTTTACATAATGGTCAAATCTTTCCTTTAATGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGATTATGTATTTTACATAATGGTCAAATCTTTCCTTTAATGTAA  350

seq1  CTTTTTATTAAGGAGTCCGTATTTTCTGATACCACTTTTTTTATGCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATTAAGGAGTCCGTATTTTCTGATACCACTTTTTTTATGCTGAC  400

seq1  TATTGTCATTACTTCGATCATCATTACTTCACAAATATTTTTTTTTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCATTACTTCGATCATCATTACTTCACAAATATTTTTTTTTCAAA  450

seq1  GATTTTTAACCATATGAATTACGAGAAAATTTACTCATTTATTCTCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTAACCATATGAATTACGAGAAAATTTACTCATTTATTCTCACTA  500

seq1  TTATGCATTGCTTGCCTATGTTCCACTAAAATGGGAATATTACAAAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCATTGCTTGCCTATGTTCCACTAAAATGGGAATATTACAAAACTG  550

seq1  GGTAAATGTATCTGTTTTATTTGCTAATGAGCTGAGAGAAATAGCTCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATGTATCTGTTTTATTTGCTAATGAGCTGAGAGAAATAGCTCATG  600

seq1  AAGTCTATTAGCACAGGTTCGAGGTAATTTTCTCTTTGTAACACAGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTATTAGCACAGGTTCGAGGTAATTTTCTCTTTGTAACACAGAGAC  650

seq1  CTTACAATGTGGTCATATCTACCTTTTGAAAGCCATACATCACATCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAATGTGGTCATATCTACCTTTTGAAAGCCATACATCACATCTTGT  700

seq1  ATGTCATATCAGGTGGGTACTAGAGTATTTGAAAACAAATCAAAGAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATATCAGGTGGGTACTAGAGTATTTGAAAACAAATCAAAGAAAAT  750

seq1  AGAACTGATTAAATTATTTTTTAAAAGTACCAAGATACAAAATTAAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGATTAAATTATTTTTTAAAAGTACCAAGATACAAAATTAAACTG  800

seq1  ACCAGAATTGTTTATCATGGATGTGAAATTGTGACTTAAAATCAATACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAATTGTTTATCATGGATGTGAAATTGTGACTTAAAATCAATACTG  850

seq1  AAGTCAAAGAAAGAAATGAGCGAAGGATAAAATGGGATTTTACATCTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAAGAAAGAAATGAGCGAAGGATAAAATGGGATTTTACATCTAAA  900

seq1  GGCATGTTTCATTTCTATTCAGTGGAGCTGAAGTCAGTACTTTTAGATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTTTCATTTCTATTCAGTGGAGCTGAAGTCAGTACTTTTAGATTA  950

seq1  TTTAAGTTGCAACCAAGTGTAAAGAAACATAATTAAACTTCAACCAGAAC  1000
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  TTTAAGTTGCAACCAAGTGTAAAGAAACAT-ATTAAACTTC-ACCAGAAC  998

seq1  AAAACATTGTACTTACTAACCACAAATGAGCAGCAGTTCTTCCCAGCTGT  1050
       ||||| ||||| |||| ||||| |||||||||||| |||| ||||||||
seq2  -AAACA-TGTAC-TACT-ACCAC-AATGAGCAGCAG-TCTTTCCAGCTGT  1042

seq1  GTGCAGAATCCTTAGCTCTCTCTTTATTGAAAAAAAAAATGTGAT-CACA  1099
      |||||| |||  ||||||||||||||| |  |||||||||||||| ||||
seq2  GTGCAG-ATC--TAGCTCTCTCTTTATGG--AAAAAAAATGTGATCCACA  1087

seq1  AAAACATTAGCCAGTACA  1117
      |||||  ||| |||||||
seq2  AAAAC-CTAG-CAGTACA  1103

seq1: chr14_113356957_113357208
seq2: B6Ng01-311D06.g_70_322 (reverse)

seq1  ATGCTGAG-AAGTGCAGTCTGAACTGAAAGTACCTTGTTTCAAACTTAGT  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGAAAGTGCAGTCTGAACTGAAAGTACCTTGTTTCAAACTTAGT  50

seq1  GGATATCTTGACCAATGATCTTTGGAAAATTAGTGGTTCCCATCCTTCTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCTTGACCAATGATCTTTGGAAAATTAGTGGTTCCCATCCTTCTC  100

seq1  CTTCTCAAAACAAAAACAAAAACAAACAAACAAACAAAAAAACCCAACAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAAAACAAAAACAAAAACAAACAAACAAACAAAAAAACCCAACAA  150

seq1  TAACAATAGAAAAGAGAAAAAAACCCCAAAACTATACAAACCATCAGAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAGAAAAGAGAAAAAAACCCCAAAACTATACAAACCATCAGAAA  200

seq1  TGGTTATAGCCTGAAATCAGCTTAGAACTGTTACCAGATAGGAGAAAGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATAGCCTGAAATCAGCTTAGAACTGTTACCAGATAGGAGAAAGAA  250

seq1  TAG  252
      |||
seq2  TAG  253