BAC Information

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BAC

Clone NameB6Ng01-312E14
Chromosome14 (Build37)
Map Location 63,947,205 - 64,051,870
singlet/doubletdoublet
Overlap geneLOC100042988, LOC432868, Blk, LOC668293
Upstream geneRnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4
Downstream geneBC065085, Tdh, Mtmr9, Xkr6, LOC668306, 2610028A01Rik, Sox7, 4930578I06Rik, Rp1l1, 4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312E14.bB6Ng01-312E14.g
ACCGA103792GA103793
length1,136956
definitionB6Ng01-312E14.b B6Ng01-312E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,947,205 - 63,948,342)(64,050,922 - 64,051,870)
sequence
gaattcagtgaagcctgaggtcctgagggaagacctcctctgctatctcc
tagcagtccctgctgatgtctgggacttttagggagagaaaaagccaggg
catcaagcagctttggtaagtcccaagcatccttgatgacagggaggaac
ctgccaacattgccagtggacattttttagaggctgcttctaagtgaaga
aggtccaggttatgactcctccatgatccaggtctgaagacacaaaggaa
aaatagtgagggtgggactggagaagctgcaggctttagcaactgcctgg
ctccagccttcctagcacaatccgatcctccagtgtcatgtgcgctcact
gtaagcagtgagacccacgacctgctgtaacaagggggctgcatcttggc
tttcccccatacctcatgtaggagaatgagagtcatttttgcattataga
ggagagtgccatctcactcaaagctttactaggcctggatgtgatactac
agagacactgtcactagggttccaaggctcccacccgatatcctgggcaa
agttgtgtgtcacctcattctgcagttttccctaacattagcagcctagc
tgttacccagcaagcctttctctctccagccctgctcaaggccctttcag
taacacatcttagaaccctgcctccccagcttgcccttgtccccacacca
ctttctcccccttccctcaatagtgtgtgaaaagaaaaggaattcctgtt
atcctccggcctccagaaagacaggcctcaaagtgtgaacagaaagcgct
tgccaagtgtgcccaagtggttattttaatcgggtggaacagccccctct
tcatggaaaattttctactctaacacctgcagcattaaaggttcctggct
tcttcttccctgggctcccaggactcactctctcaccagggcaggatgcc
agctcaggtaattattcttgcccttcctttcccccagccccctttccttc
ccaactcacttccctgttccatggagcaattctgtgggatttcttgctct
ttttggttccagaacagagtggtgcctgcctcctcaccaaggcttctctg
ggagttctgatcaggctgtccctggccctctggctg
gaattccacactccaagactagaaggaccccaacaagatgtgaaatcaga
gtttggcctttgaggctcttataaatgtctatttgtcaaggcagaaggga
agaacaaaccgtatttcaaagtttattagtttgatttataatgtttaaat
atttagacacatggtgcgtgggcctctttcgttgcatttgctttgggcct
ctcaaatgtcaggggtgggtgtgattgcaacccgtgttgctggtttgttt
aaggaacagatgacatggtgccctgggcacaagcccaggctgtaactatc
ctcccttccatctccactgtggcctcttggagcttggccttctcttctgt
gaacacttgtaagagcagaaatggagaaagtatttacaggtctgtactgg
cagctgcctggtggtctcctcaacacatgcagcattagaaggagaccagc
agtcattgcttccagtggtggtgtgcagccttgaggatcaggggaaagcc
tatggatgctatgcatcatccttcaaggagccttggtggatgagagaatc
ctgagaaggagccaagaggtccagattccagacttagcatcattattaat
taggttagcctgttttgcattcagtacaattgatttctgctctggctgcc
tctgaccccagttctgtaatactcgttacctactgcctaggatccatcac
ctgcaatggcaggagaaggtgctgaaaacccacagagcagcatgctctga
acagtgcaaatctggaccagcaagaggccagggaagtctgccgaatagaa
acagtgcagtatccgggcatggtagcacatgcctttaatcccagcacttg
ggaggcaaagcaggcagatttctgaagttagaggccagcctgattcacaa
agtgatttccaggaacagtcaggatattccgagaaactctgtcatcgaaa
tagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_63947205_63948342
seq2: B6Ng01-312E14.b_44_1179

seq1  GAATTCAGTGAAGCCTGAGGTCCTGAGGGAAGACCTCCTCTGCTATCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAAGCCTGAGGTCCTGAGGGAAGACCTCCTCTGCTATCTCC  50

seq1  TAGCAGTCCCTGCTGATGTCTGGGACTTTTAGGGAGAGAAAAAGCCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTCCCTGCTGATGTCTGGGACTTTTAGGGAGAGAAAAAGCCAGGG  100

seq1  CATCAAGCAGCTTTGGTAAGTCCCAAGCATCCTTGATGACAGGGAGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGCAGCTTTGGTAAGTCCCAAGCATCCTTGATGACAGGGAGGAAC  150

seq1  CTGCCAACATTGCCAGTGGACATTTTTTAGAGGCTGCTTCTAAGTGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAACATTGCCAGTGGACATTTTTTAGAGGCTGCTTCTAAGTGAAGA  200

seq1  AGGTCCAGGTTATGACTCCTCCATGATCCAGGTCTGAAGACACAAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAGGTTATGACTCCTCCATGATCCAGGTCTGAAGACACAAAGGAA  250

seq1  AAATAGTGAGGGTGGGACTGGAGAAGCTGCAGGCTTTAGCAACTGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGAGGGTGGGACTGGAGAAGCTGCAGGCTTTAGCAACTGCCTGG  300

seq1  CTCCAGCCTTCCTAGCACAATCCGATCCTCCAGTGTCATGTGCGCTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCTTCCTAGCACAATCCGATCCTCCAGTGTCATGTGCGCTCACT  350

seq1  GTAAGCAGTGAGACCCACGACCTGCTGTAACAAGGGGGCTGCATCTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAGTGAGACCCACGACCTGCTGTAACAAGGGGGCTGCATCTTGGC  400

seq1  TTTCCCCCATACCTCATGTAGGAGAATGAGAGTCATTTTTGCATTATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCATACCTCATGTAGGAGAATGAGAGTCATTTTTGCATTATAGA  450

seq1  GGAGAGTGCCATCTCACTCAAAGCTTTACTAGGCCTGGATGTGATACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTGCCATCTCACTCAAAGCTTTACTAGGCCTGGATGTGATACTAC  500

seq1  AGAGACACTGTCACTAGGGTTCCAAGGCTCCCACCCGATATCCTGGGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGTCACTAGGGTTCCAAGGCTCCCACCCGATATCCTGGGCAA  550

seq1  AGTTGTGTGTCACCTCATTCTGCAGTTTTCCCTAACATTAGCAGCCTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTGTCACCTCATTCTGCAGTTTTCCCTAACATTAGCAGCCTAGC  600

seq1  TGTTACCCAGCAAGCCTTTCTCTCTCCAGCCCTGCTCAAGGCCCTTTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCCAGCAAGCCTTTCTCTCTCCAGCCCTGCTCAAGGCCCTTTCAG  650

seq1  TAACACATCTTAGAACCCTGCCTCCCCAGCTTGCCCTTGTCCCCACACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACATCTTAGAACCCTGCCTCCCCAGCTTGCCCTTGTCCCCACACCA  700

seq1  CTTTCTCCCCCTTCCCTCAATAGTGTGTGAAAAGAAAAGGAATTCCTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCCCCTTCCCTCAATAGTGTGTGAAAAGAAAAGGAATTCCTGTT  750

seq1  ATCCTCCGGCCTCCAGAAGGACAGGCCTCAAAGTGTGAACAGAAAGCGCT  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATCCTCCGGCCTCCAGAAAGACAGGCCTCAAAGTGTGAACAGAAAGCGCT  800

seq1  TGCCAAGTGTGCCCAAGTGGTTATTTTAATCGGGTGGAACAGCCCCCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGTGTGCCCAAGTGGTTATTTTAATCGGGTGGAACAGCCCCCTCT  850

seq1  TCATGGAAAATTTTCTACTCTAACACCTGCAGCATTAAAGGTTCCTGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGAAAATTTTCTACTCTAACACCTGCAGCATTAAAGGTTCCTGGCT  900

seq1  TCTTCTCCCCTGGGCTCCCAGGACTCACTCTCTCACCAGGGCAGGATGCC  950
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCCCTGGGCTCCCAGGACTCACTCTCTCACCAGGGCAGGATGCC  950

seq1  AGCTCAGGTAATTATTCTTGCCCTTCCTTTCCCCCAGCCCCC-TTCCTTC  999
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCTCAGGTAATTATTCTTGCCCTTCCTTTCCCCCAGCCCCCTTTCCTTC  1000

seq1  CCAACTCAC-TCCCTGTCCCATGGGAGCAATTCTGTGGGATTTCTTGCTC  1048
      ||||||||| ||||||| |||| |||||||||||||||||||||||||||
seq2  CCAACTCACTTCCCTGTTCCAT-GGAGCAATTCTGTGGGATTTCTTGCTC  1049

seq1  TTTTGGTTTCCAGAACAAGAGTGGTGCCTGCCTCCTCACCAAAGGCTTCT  1098
      |||| | ||||||||| ||||||||||||||||||||||| |||||||||
seq2  TTTTTGGTTCCAGAAC-AGAGTGGTGCCTGCCTCCTCACC-AAGGCTTCT  1097

seq1  CTGGGGTTCCTGGATCAGGCTTGTCCCT-GCCCTCTGGCTG  1138
      |||||  | || |||||||| ||||||| ||||||||||||
seq2  CTGGGAGTTCT-GATCAGGC-TGTCCCTGGCCCTCTGGCTG  1136

seq1: chr14_64050922_64051870
seq2: B6Ng01-312E14.g_67_1016 (reverse)

seq1  TTTCGA-GACAGAGTTTCTCTGTATAGCCCTGGCTG-TCCTGGAACTCAC  48
      |||||| ||||||||||||| | |||  |||| ||| |||||||| ||||
seq2  TTTCGATGACAGAGTTTCTCGGAATA-TCCTGACTGTTCCTGGAAATCAC  49

seq1  TTTGTGGATCAGGCTGGCCTCTAAC-TCAGAAATCTGCCTGCCTCTGCCT  97
      |||||| |||||||||||||||||| ||||||||||||||| || |||||
seq2  TTTGTGAATCAGGCTGGCCTCTAACTTCAGAAATCTGCCTG-CTTTGCCT  98

seq1  CCCAAGTGCTGGGATTAAAGGCATGTGCTACCATGCCCGGCTACTGCACT  147
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCAAGTGCTGGGATTAAAGGCATGTGCTACCATGCCCGGATACTGCACT  148

seq1  GTTTCTCTTCGGCAGACTTCCCTGGCCTCTTGCTGGTCCAGATTTGCACT  197
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATTCGGCAGACTTCCCTGGCCTCTTGCTGGTCCAGATTTGCACT  198

seq1  GTTCAGAGCATGCTGCTCTGTGGGTTTTCAGCACCTTCTCCTGCCATTGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAGCATGCTGCTCTGTGGGTTTTCAGCACCTTCTCCTGCCATTGC  248

seq1  AGGTGATGGATCCTAGGCAGTAGGTAACGAGTATTACAGAACTGGGGTCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATGGATCCTAGGCAGTAGGTAACGAGTATTACAGAACTGGGGTCA  298

seq1  GAGGCAGCCAGAGCAGAAATCAATTGTACCGAATGCAAAACAGGCTAACC  347
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAGGCAGCCAGAGCAGAAATCAATTGTACTGAATGCAAAACAGGCTAACC  348

seq1  TAATTAATAATGATGCTAAGTCTGGAATCTGGACCTCTTGGCTCCTTCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATAATGATGCTAAGTCTGGAATCTGGACCTCTTGGCTCCTTCTC  398

seq1  AGGATTCTCTCATCCACCAAGGCTCCTTGAAGGATGATGCATAGCATCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCTCTCATCCACCAAGGCTCCTTGAAGGATGATGCATAGCATCCA  448

seq1  TAGGCTTTCCCCTGATCCTCAAGGCTGCACACCACCACTGGAAGCAATGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTTCCCCTGATCCTCAAGGCTGCACACCACCACTGGAAGCAATGA  498

seq1  CTGCTGGTCTCCTTCTAATGCTGCATGTGTTGAGGAGACCACCAGGCAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGTCTCCTTCTAATGCTGCATGTGTTGAGGAGACCACCAGGCAGC  548

seq1  TGCCAGTACAGACCTGTAAATACTTTCTCCATTTCTGCTCTTACAAGTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTACAGACCTGTAAATACTTTCTCCATTTCTGCTCTTACAAGTGT  598

seq1  TCACAGAAGAGAAGGCCAAGCTCCAAGAGGCCACAGTGGAGATGGAAGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAGAGAAGGCCAAGCTCCAAGAGGCCACAGTGGAGATGGAAGGG  648

seq1  AGGATAGTTACAGCCTGGGCTTGTGCCCAGGGCACCATGTCATCTGTTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGTTACAGCCTGGGCTTGTGCCCAGGGCACCATGTCATCTGTTCC  698

seq1  TTAAACAAACCAGCAACACGGGTTGCAATCACACCCACCCCTGACATTTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAACCAGCAACACGGGTTGCAATCACACCCACCCCTGACATTTG  748

seq1  AGAGGCCCAAAGCAAATGCAACGAAAGAGGCCCACGCACCATGTGTCTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCCAAAGCAAATGCAACGAAAGAGGCCCACGCACCATGTGTCTAA  798

seq1  ATATTTAAACATTATAAATCAAACTAATAAACTTTGAAATACGGTTTGTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAACATTATAAATCAAACTAATAAACTTTGAAATACGGTTTGTT  848

seq1  CTTCCCTTCTGCCTTGACAAATAGACATTTATAAGAGCCTCAAAGGCCAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTCTGCCTTGACAAATAGACATTTATAAGAGCCTCAAAGGCCAA  898

seq1  ACTCTGATTTCACATCTTGTTGGGGTCCTTCTAGTCTTGGAGTGTGGAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGATTTCACATCTTGTTGGGGTCCTTCTAGTCTTGGAGTGTGGAAT  948

seq1  TC  949
      ||
seq2  TC  950