BAC Information

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BAC

Clone NameB6Ng01-312I17
Chromosome14 (Build37)
Map Location 102,743,868 - 102,744,979
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
Downstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312I17.bB6Ng01-312I17.g
ACCGA103987GA103988
length1,1811,105
definitionB6Ng01-312I17.b B6Ng01-312I17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatgctgaatggctgagaagcacctaaacaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaaaataaaaaattcatatgacagca
aatgctggcgaagatgtggagaaagaggaacactcctccattgctggtgg
gattgcaagcttgtacaaccattctggaaatcagtctggtgaaaattggc
cataatatactaccagaggatccagcagtacctctcctgggcatatactc
cacagatgttccaagtggtaataagaacacattctccactgtgttcatag
cagccttatttataatagccagaagctggaaagaacccagatgcccctca
acagaggaatggatacaaaaaatgtggtacatttacataatggagtacta
ttcagctattaaaaacaatgaatttatgtaattcttaggcaaatggatga
atctggaggatatcatcctgagtgaggtaacataatcacaaaagagctca
cgtgatatgcactcactgataagtgaatattagcccaaaatcttaaaata
ctcaatatacaagttgcaaaacacatgaaactcaagaagaaggaagacca
aagtgtggatatggtatccctccttagagtggggaacaaaatacccatgg
aaggagttacagagacaaagtttggagctgagatggaagaaaggacaatc
catcccacccagggatccatcccataatcagccaccaaacacagacacta
ttgcaaatgccagcaagattttgctgatatgaccctgatatagctgtctc
ttgtgaggctatgccagtgcctggcaaatacagaagtggatgctcacagt
catctgttggatggaacacaggccaatggaagagctagagaaagtatcca
aggagctgaaggggtctgtaactctataggaggaacagcatatgaactaa
ccagtaccccttgatctcatgtctctagctgcatatgtaggagaagatgg
cgtagtcagccatacctggaagaagaggccttggtctttgccaaagaatt
tatatgcccagtacaaggaatgccaaggccaggaagtgaatttgtttggc
ttgggagcaggccaggggaaaagtgtttaag
gaattcacttgtggttattaatttatttaatttttacatgagtggactta
ctttgcaggatgctaggatacagtacatgcaggaaaccataagactgctc
tagttccaacctcagtactgactcggtgaaggcagttgactatgaggtat
aaattggccaaatgtgctgaaattgactagaaagaattatgcctgtactt
gctatcttttagagactctctttatgctttaactgaaaaaaaaaacttat
aaaactgagttcaaataagggcagaaacgtatgtaatagatattttgaca
tgtatgagttgcacatatttcaagaaaaacaattccctaaaaaggagaag
gaagagctctgaggtccctctgttcagcatcagaattctgggaagttcta
gaatgttttccaaaagctgttacagattctgtcagtgagccaccagtaaa
tatgtcttgaaacattaaaacaaaaatacaaaaaaaaaaaaaatcagttg
ctaggcagaattgatatcatctcctacttttagaactctgaaataaatgt
tatttaaacaaacgacatccacactcaggacatgcccatgataaaactct
aattcacaatcgggagtggactcttattgcctgaataataaacaataatt
attggactaatctgcacttacttttcgtgtactatgaaaataaaaataat
aatgatttagggccagtggttggctcaatgagtaaaggcacttgctgcca
aatctggaaaacctatttgaaacaaaataagttgatgagattaaatgaaa
caaaacccaacgtacagaaaacctgacattccagcagtgtatgctctata
aggttgaaaccatcctcatttcttttatgctactttgagtttttgtgtta
agtatttgcctcttagatttgggcaccttactgggaataaagtcataagg
ttttgaagtacaaaggagaaaggatagatggagttgtagctgcttcctcg
gtgagtacacacacttcataccaaacagtaacagtcttttacagagcgca
cgtcacgatttttttctggagttccaccatgctgcttctcacagtcccgg
ctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102743868_102744979
seq2: B6Ng01-312I17.g_67_1171

seq1  GAATTCACTTGTGGTTATTAATTTATTTAATTTTTACATGAGTGGACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTGGTTATTAATTTATTTAATTTTTACATGAGTGGACTTA  50

seq1  CTTTGCAGGATGCTAGGATACAGTACATGCAGGAAACCATAAGACTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAGGATGCTAGGATACAGTACATGCAGGAAACCATAAGACTGCTC  100

seq1  TAGTTCCAACCTCAGTACTGACTCGGTGAAGGCAGTTGACTATGAGGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCAACCTCAGTACTGACTCGGTGAAGGCAGTTGACTATGAGGTAT  150

seq1  AAATTGGCCAAATGTGCTGAAATTGACTAGAAAGAATTATGCCTGTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGCCAAATGTGCTGAAATTGACTAGAAAGAATTATGCCTGTACTT  200

seq1  GCTATCTTTTAGAGACTCTCTTTATGCTTTAACTGAAAAAAAAAACTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTTTTAGAGACTCTCTTTATGCTTTAACTGAAAAAAAAAACTTAT  250

seq1  AAAACTGAGTTCAAATAAGGGCAGAAACGTATGTAATAGATATTTTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAGTTCAAATAAGGGCAGAAACGTATGTAATAGATATTTTGACA  300

seq1  TGTATGAGTTGCACATATTTCAAGAAAAACAATTCCCTAAAAAGGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAGTTGCACATATTTCAAGAAAAACAATTCCCTAAAAAGGAGAAG  350

seq1  GAAGAGCTCTGAGGTCCCTCTGTTCAGCATCAGAATTCTGGGAAGTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCTCTGAGGTCCCTCTGTTCAGCATCAGAATTCTGGGAAGTTCTA  400

seq1  GAATGTTTTCCAAAAGCTGTTACAGATTCTGTCAGTGAGCCACCAGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTTTCCAAAAGCTGTTACAGATTCTGTCAGTGAGCCACCAGTAAA  450

seq1  TATGTCTTGAAACATTAAAACAAAAATACAAAAAAAAAAAAAATCAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTGAAACATTAAAACAAAAATACAAAAAAAAAAAAAATCAGTTG  500

seq1  CTAGGCAGAATTGATATCATCTCCTACTTTTAGAACTCTGAAATAAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGAATTGATATCATCTCCTACTTTTAGAACTCTGAAATAAATGT  550

seq1  TATTTAAACAAACGACATCCACACTCAGGACATGCCCATGATAAAACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAACAAACGACATCCACACTCAGGACATGCCCATGATAAAACTCT  600

seq1  AATTCACAATCGGGAGTGGACTCTTATTGCCTGAATAATAAACAATAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACAATCGGGAGTGGACTCTTATTGCCTGAATAATAAACAATAATT  650

seq1  ATTGGACTAATCTGCACTTACTTTTCGTGTACTATGAAAATAAAAATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACTAATCTGCACTTACTTTTCGTGTACTATGAAAATAAAAATAAT  700

seq1  AATGATTTAGGGCCAGTGGTTGGCTCAATGAGTAAAGGCACTTGCTGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTAGGGCCAGTGGTTGGCTCAATGAGTAAAGGCACTTGCTGCCA  750

seq1  AATCTGGAAAACCTATTTGAAACAAAATAAGTTGATGAGATTAAATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGAAAACCTATTTGAAACAAAATAAGTTGATGAGATTAAATGAAA  800

seq1  CAAAACCCAACGTACAGAAAACCTGACATTCCAGCAGTGTATGCTCTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCCAACGTACAGAAAACCTGACATTCCAGCAGTGTATGCTCTATA  850

seq1  AGGTTGAAACCATCCTCATTTCTTTTATGCTACTTTGAGTTTTTGTGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAAACCATCCTCATTTCTTTTATGCTACTTTGAGTTTTTGTGTTA  900

seq1  AGTATTTGCCTCTTAGATTT-GGCACCTTACT-GGAATAAAGTCATAAGG  948
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  AGTATTTGCCTCTTAGATTTGGGCACCTTACTGGGAATAAAGTCATAAGG  950

seq1  TTTTGAAGTACAAAGGAGAAAGGATAGAT-GAGTTGTTAGCCTGCTTCCC  997
      ||||||||||||||||||||||||||||| |||||| ||| |||||||| 
seq2  TTTTGAAGTACAAAGGAGAAAGGATAGATGGAGTTG-TAG-CTGCTTCC-  997

seq1  TCCGGTGAAGTACACACACTTCATACAAAACAAGTAACCAGTCTTTTACA  1047
        ||||| |||||||||||||||||| |||| ||||| ||||||||||||
seq2  -TCGGTG-AGTACACACACTTCATACCAAAC-AGTAA-CAGTCTTTTACA  1043

seq1  AGAAGCGCACTTCACGATTTTTTTTCTGAGTCCCACCATGCTGGCTTCTC  1097
         ||||||| |||||||||||||   |||| |||||||||| |||||||
seq2  --GAGCGCACGTCACGATTTTTTTCTGGAGTTCCACCATGCT-GCTTCTC  1090

seq1  ACATTCCCCGCTAGC  1112
      ||| |||| ||||||
seq2  ACAGTCCCGGCTAGC  1105