BAC Information

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BAC

Clone NameB6Ng01-312P01
Chromosome14 (Build37)
Map Location 99,238,091 - 99,376,534
singlet/doubletdoublet
Overlap genenone
Upstream geneDach1, LOC635593, LOC619716
Downstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312P01.bB6Ng01-312P01.g
ACCGA104286GA104287
length1,1051,092
definitionB6Ng01-312P01.b B6Ng01-312P01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,238,091 - 99,239,183)(99,375,442 - 99,376,534)
sequence
gaattccatgtaaaattgcattaaaaacacaaattatatttatgctatca
catattaaatataggcaagtttatcacatagctaaaaatttactactgga
attcggaaatttacttactcaacacatgaaataagtgttaaagttaatat
ggtcagttttgcaatacttttcctggtctatttctctagttacattgtga
ggctgcaatgtctgaatacagaagagcctaaagtattcatggttaacgtt
gagatttgacataatgtttaagttcactttttagatgcttccctatacaa
aatcctagatgattttcaaattgaattctcagttccaaaaccccaagcaa
gttactgtaatcgagaggcaaaagaggaaaaaaaaaaagaaagaaagaaa
gaaagaaagaaagaaagaaaaagaaaaaagaaaagaaaaaagaaaaacgt
ttaaaataaaaattaatgaaattctatcccatctattatcatgcttggta
ataaaagaaggggcttgaaagagaaaaggataaatcaaatttaacattat
aactcttttaataataaaaacgtatagattccaaaccccttcagtgaccc
tgtcttacacagtataattccctaaaacttctaagtcactcaatgataag
aggctgatctaaaggcttccaccgcattaatcaaataccaggtctaatta
aaagagccatgcacaaagctttttcaaaatgttgctcaggtattgcaata
atttctgatcacccaagcctggaagacaaataattagagctgccagagca
ttctgatgagtgatgtcagcatctccgagtgaccttccctccactaatta
attttcatcttaagaaaagagaccctgttgttgcacattattaattgagt
tcactaaaagatgcgcctgattaattttttgttgataatactttgtcatt
ctaggcagcggctgtaatcattctattgggtttttatttttttttaagtt
gatctaagtcctttgcaatgtgactgaatatatctgaataacaaaaatat
catgcgtaaagggcaatatccctgtatgtactggcctatttttcattggt
ggttg
gaattccatttactttctcaccttgctatcacaagacctgtgtgaagagt
ctcagagaatatccctcctgatccagctagcagcccatctgttctttggg
tctgccctgtgtctacctgccacccttttgcccttggccagatttacatt
tctctttgtatcagttgatgaaatcttcttcctacatcaagttcctactc
aaattctacttactttacaaagcagaaatattagcttctatttctagctc
cacttagcgactttctgaacctttcccttttatggcatgtaccttttcta
ttgcatgcttcttaattttccctgatctattacaaggccttcaaagtatt
atgagaaacaatatttatatataagtatatgattaatataacattaagca
attaacaaaataataatgttaactttatgatcctttcaacctctatatga
gatcaaaggcatcaaaatataaatattgaggcaggatccaagcaggaact
atgttataaatataatagggcaggaaacagctcatgagtggactgcactt
cactaaggcagtgtcagagtgtatcgaatgtcatggtgactctctaatgt
cctcagaagtccatttagcttctatgcagtatctttttgccacttttact
tcttataaaaatatagttgggtgatgagctttaattgtcaatttgacaca
atctagaatcgactgagaagagtctcaatggaagattgtctacaatggtt
tggtttgtgggcgtgtctgtgggcattgtcttaaattagttgatgtgagg
agttctagcccactgtgagaagaactattccctaggcagacatgaaatca
gagtatataagaactccaaagttattttagagtaccctaaagtgagatgc
cttggagtttgaagacaactttagtcccttacttcatgagttgcacccac
ttttaagtaagttgcttaatctcaaatttttcagtcccttcatctataaa
gagaatatataacattctattcttgtagagtttgggtgagaaataaataa
taactatagaccacaaatggagatttactaatatagggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99238091_99239183
seq2: B6Ng01-312P01.b_48_1152

seq1  GAATTCCATGTAAAATTGCATTAAAAACACAAATTATATTTATGCTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTAAAATTGCATTAAAAACACAAATTATATTTATGCTATCA  50

seq1  CATATTAAATATAGGCAAGTTTATCACATAGCTAAAAATTTACTACTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAAATATAGGCAAGTTTATCACATAGCTAAAAATTTACTACTGGA  100

seq1  ATTCGGAAATTTACTTACTCAACACATGAAATAAGTGTTAAAGTTAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGAAATTTACTTACTCAACACATGAAATAAGTGTTAAAGTTAATAT  150

seq1  GGTCAGTTTTGCAATACTTTTCCTGGTCTATTTCTCTAGTTACATTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTTTTGCAATACTTTTCCTGGTCTATTTCTCTAGTTACATTGTGA  200

seq1  GGCTGCAATGTCTGAATACAGAAGAGCCTAAAGTATTCATGGTTAACGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAATGTCTGAATACAGAAGAGCCTAAAGTATTCATGGTTAACGTT  250

seq1  GAGATTTGACATAATGTTTAAGTTCACTTTTTAGATGCTTCCCTATACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGACATAATGTTTAAGTTCACTTTTTAGATGCTTCCCTATACAA  300

seq1  AATCCTAGATGATTTTCAAATTGAATTCTCAGTTCCAAAACCCCAAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAGATGATTTTCAAATTGAATTCTCAGTTCCAAAACCCCAAGCAA  350

seq1  GTTACTGTAATCGAGAGGCAAAAGAGGAAAAAAAAAAAGAAAGAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGTAATCGAGAGGCAAAAGAGGAAAAAAAAAAAGAAAGAAAGAAA  400

seq1  GAAAGAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAAGAAAAACGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAAGAAAAACGT  450

seq1  TTAAAATAAAAATTAATGAAATTCTATCCCATCTATTATCATGCTTGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAAAAATTAATGAAATTCTATCCCATCTATTATCATGCTTGGTA  500

seq1  ATAAAAGAAGGGGCTTGAAAGAGAAAAGGATAAATCAAATTTAACATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAGGGGCTTGAAAGAGAAAAGGATAAATCAAATTTAACATTAT  550

seq1  AACTCTTTTAATAATAAAAACGTATAGATTCCAAACCCCTTCAGTGACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTTAATAATAAAAACGTATAGATTCCAAACCCCTTCAGTGACCC  600

seq1  TGTCTTACACAGTATAATTCCCTAAAACTTCTAAGTCACTCAATGATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTACACAGTATAATTCCCTAAAACTTCTAAGTCACTCAATGATAAG  650

seq1  AGGCTGATCTAAAGGCTTCCACCGCATTAATCAAATACCAGGTCTAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGATCTAAAGGCTTCCACCGCATTAATCAAATACCAGGTCTAATTA  700

seq1  AAAGAGCCATGCACAAAGCTTTTTCAAAATGTTGCTCAGGTATTGCAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCCATGCACAAAGCTTTTTCAAAATGTTGCTCAGGTATTGCAATA  750

seq1  ATTTCTGATCACCCAAGCCTGGAAGACAAATAATTAGAGCTGCCAGAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGATCACCCAAGCCTGGAAGACAAATAATTAGAGCTGCCAGAGCA  800

seq1  TTCTGATGAGTGATGTCAGCATCTCCGAGTGACCTTCCCTCCACTAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGAGTGATGTCAGCATCTCCGAGTGACCTTCCCTCCACTAATTA  850

seq1  ATTTTCATCTTAAGAAAAGAGACCCTGTTGTTGCACATTATTAATTGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATCTTAAGAAAAGAGACCCTGTTGTTGCACATTATTAATTGAGT  900

seq1  TCACTAAAAGATGCGCCTGATTAA-TTTTTGTTGATAATAC-TTGTCATT  948
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  TCACTAAAAGATGCGCCTGATTAATTTTTTGTTGATAATACTTTGTCATT  950

seq1  CTAGGCAGCGGCTGTAATCATTCTATTGGGTTT---TATTTTTTTAAGTT  995
      |||||||||||||||||||||||||||||||||   | ||||||||||||
seq2  CTAGGCAGCGGCTGTAATCATTCTATTGGGTTTTTATTTTTTTTTAAGTT  1000

seq1  GATCTAAGTCCTTTGCAATGTGACTG-ATATATCTG-ATA--CAAAATAT  1041
      |||||||||||||||||||||||||| ||||||||| |||   |||||||
seq2  GATCTAAGTCCTTTGCAATGTGACTGAATATATCTGAATAACAAAAATAT  1050

seq1  CATGCGT-AAGGGC-ATAT-CCTGTAATGTACCTGGCTATTTTTCA-TGG  1087
      ||||||| |||||| |||| ||||| ||||||  | |||||||||| |||
seq2  CATGCGTAAAGGGCAATATCCCTGT-ATGTACTGGCCTATTTTTCATTGG  1099

seq1  TGGTTG  1093
      ||||||
seq2  TGGTTG  1105

seq1: chr14_99375442_99376534
seq2: B6Ng01-312P01.g_66_1157 (reverse)

seq1  CACTCACTATA-TAGTAAAATCTCATTTTGTGTCTTATAGTAATTTATTT  49
      ||||| ||||| |||| |||||||  ||||||   |||||| | ||||||
seq2  CACTCCCTATATTAGT-AAATCTCCATTTGTGGTCTATAGTTA-TTATTT  48

seq1  ATTTCTCACCCAAACTCTAC-AGAATAG-ATGTTATTATTATTCTCTTTA  97
      |||||||||||||||||||| ||||||| |||||||   |||||||||||
seq2  ATTTCTCACCCAAACTCTACAAGAATAGAATGTTAT--ATATTCTCTTTA  96

seq1  TAGATGAGGGGACTGAAAAATTTTGAGATTAAGCAACTTACTT-AAAGT-  145
      ||||||| |||||||||||| |||||||||||||||||||||| ||||| 
seq2  TAGATGAAGGGACTGAAAAA-TTTGAGATTAAGCAACTTACTTAAAAGTG  145

seq1  GGTGCAACTCATGAAAGTAAGGGACTAAAGTTGTCTTCAAACTCCAAGGC  195
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGTGCAACTCATG-AAGTAAGGGACTAAAGTTGTCTTCAAACTCCAAGGC  194

seq1  ATCTCACTTTAGGGTACTCTAAAATAACTTTGGAGTTCTTATATACTCTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACTTTAGGGTACTCTAAAATAACTTTGGAGTTCTTATATACTCTG  244

seq1  ATTTCATGTCTGCCTAGGGAATAGTTCTTCTCACAGTGGGCTAGAACTCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGTCTGCCTAGGGAATAGTTCTTCTCACAGTGGGCTAGAACTCC  294

seq1  TCACATCAACTAATTTAAGACAATGCCCACAGACACGCCCACAAACCAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCAACTAATTTAAGACAATGCCCACAGACACGCCCACAAACCAAA  344

seq1  CCATTGTAGACAATCTTCCATTGAGACTCTTCTCAGTCGATTCTAGATTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTAGACAATCTTCCATTGAGACTCTTCTCAGTCGATTCTAGATTG  394

seq1  TGTCAAATTGACAATTAAAGCTCATCACCCAACTATATTTTTATAAGAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATTGACAATTAAAGCTCATCACCCAACTATATTTTTATAAGAAG  444

seq1  TAAAAGTGGCAAAAAGATACTGCATAGAAGCTAAATGGACTTCTGAGGAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGGCAAAAAGATACTGCATAGAAGCTAAATGGACTTCTGAGGAC  494

seq1  ATTAGAGAGTCACCATGACATTCGATACACTCTGACACTGCCTTAGTGAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGAGTCACCATGACATTCGATACACTCTGACACTGCCTTAGTGAA  544

seq1  GTGCAGTCCACTCATGAGCTGTTTCCTGCCCTATTATATTTATAACATAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTCCACTCATGAGCTGTTTCCTGCCCTATTATATTTATAACATAG  594

seq1  TTCCTGCTTGGATCCTGCCTCAATATTTATATTTTGATGCCTTTGATCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTTGGATCCTGCCTCAATATTTATATTTTGATGCCTTTGATCTC  644

seq1  ATATAGAGGTTGAAAGGATCATAAAGTTAACATTATTATTTTGTTAATTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAGGTTGAAAGGATCATAAAGTTAACATTATTATTTTGTTAATTG  694

seq1  CTTAATGTTATATTAATCATATACTTATATATAAATATTGTTTCTCATAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGTTATATTAATCATATACTTATATATAAATATTGTTTCTCATAA  744

seq1  TACTTTGAAGGCCTTGTAATAGATCAGGGAAAATTAAGAAGCATGCAATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGAAGGCCTTGTAATAGATCAGGGAAAATTAAGAAGCATGCAATA  794

seq1  GAAAAGGTACATGCCATAAAAGGGAAAGGTTCAGAAAGTCGCTAAGTGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTACATGCCATAAAAGGGAAAGGTTCAGAAAGTCGCTAAGTGGA  844

seq1  GCTAGAAATAGAAGCTAATATTTCTGCTTTGTAAAGTAAGTAGAATTTGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAATAGAAGCTAATATTTCTGCTTTGTAAAGTAAGTAGAATTTGA  894

seq1  GTAGGAACTTGATGTAGGAAGAAGATTTCATCAACTGATACAAAGAGAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAACTTGATGTAGGAAGAAGATTTCATCAACTGATACAAAGAGAAA  944

seq1  TGTAAATCTGGCCAAGGGCAAAAGGGTGGCAGGTAGACACAGGGCAGACC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATCTGGCCAAGGGCAAAAGGGTGGCAGGTAGACACAGGGCAGACC  994

seq1  CAAAGAACAGATGGGCTGCTAGCTGGATCAGGAGGGATATTCTCTGAGAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAACAGATGGGCTGCTAGCTGGATCAGGAGGGATATTCTCTGAGAC  1044

seq1  TCTTCACACAGGTCTTGTGATAGCAAGGTGAGAAAGTAAATGGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACACAGGTCTTGTGATAGCAAGGTGAGAAAGTAAATGGAATTC  1092