BAC Information

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BAC

Clone NameB6Ng01-312P20
Chromosome14 (Build37)14 (Build37)
Map Location 7,670,824 - 7,671,9724,907,911 - 4,908,826
singlet/doubletsingletsinglet
Overlap geneLOC100042054
Upstream geneLOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700
Downstream geneLOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312P20.bB6Ng01-312P20.g
ACCGA104321GA104322
length1,1391,149
definitionB6Ng01-312P20.b B6Ng01-312P20.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(7,670,824 - 7,671,972)(4,907,911 - 4,908,826)
sequence
gaattcagtgttcatcctgtggcatggcccaagaagcaaataatatgctg
aattaaggaatcaataatcatgtgcaaacaggctatatcatgtactaccc
aagccaagtgcatgccacatcctggctcattcaaactgggtcccctaggt
gctaattaaacttactatcctgggcagaggacagcagagccaggagacca
aatggagctagctgaccttcaagggcttcccgggcaagcatgtaggaata
gagtacttctatgacaattttacactacactgtgccacaggcaagggtcc
agtagatatctgaaatgacgttcctcttatttttaaggcagggattctca
ttccttggttcctgttgttatgtgaattcccagaggacacaactagtatt
tagaggagaaaggctttatcatacctcctcccccagtagattcctgtgtg
acaccaaggaaacaccaggagcaaacttccctggtgatcactttggacct
ctatggactcaacactatcaggacctgcaaactgtgcttcacacaaatcc
tcaggccccatcaaaggtcccagagccccagtcctgaacaaaacacacac
acatctacattcacacacacagacacaattagaatgccaaataaatcctg
tgaggtgccatctctcagaatattataaacaatatcagagtaaagccgtg
atagcctgcaggcattgcattcacacactgagagacagtaagtgtgagca
ggtccttccagctgtttagagcaacaatcagattgcaagcaccccaaggt
caagtacaaaagaagatgataataaacacacagcaccttgtttatccaac
aattaaacacctgtcaggctacctaattgtaatgatgagagatgacacac
tccattcatggaaggaaattggggtaacagatggcagaatacagtcaata
gggtactggttcataattcctacctgtagtttaaatcctcatacatgtaa
acattcaggatttcacacatttcttctctcatgctgatctccttaatatg
caatttcagttctctacttatttatattgatattctgatttgtgatgtga
ttgggtgaaggtattctagcagacctgccagatagataa
gaattccttataaccccatgggacaaagaatagttgaacgtgctcatcgc
accttaaagaattggctttttaagacagatcaggggcagctatatccccc
aaagtcaccaaaggcccatcttggctttactttatttgttccaaattttt
tgcaaactgatattaagggtcagtctgcagcagatcgccactggtatcca
gtgacttctagttcttatgcattggtaaaagggaaggacccactgactaa
cgaatagaagggtccagatccggttctaatctggggaaggggctcggttt
gtgttttttcacgagatgaagatagagtgcagtggctgccagagagatta
attcctcagatgaacacagattctgaatcttcttacaagtatcaccttga
ggaataaaatttttcttttgcttaaaattcacctggaaactgaagctcct
gggaaagctgtttttctgctactctctgagccagctcccccacaggagtc
cagagactaaccttagcattacaatttgcaactgaataaagtacctgaac
ttccccaaatgaagcaggaatctggcccctcacccttccttcataactga
gtgcagaatagtaaaaattaaaccttgagcagagacctttgtcttggtta
ctttcttatctctcacagcccagcccctcttctcttccaggtttccaaaa
tgccttaccaggctagaacccaggctgtaatctgctggccgaatataaca
gctttgtacatagtttatatcaaaatcaacttattctatagtccagaact
tacttaatcagtctgacagaaattttgcaccctctgacaaacatcattcc
atccctcttctaccttcctccttggaccatcattctcagagatgagcaat
tctgagggaatcctaatagccccaaaggtagtcatctttggcacttgatc
tttaggaaagtagcagagtctgccccagatgattgcagatgctcctcttt
gcctccactgtctgggaaactttgttatactctcctctcatcttatttgg
acctaagaatacatattttccacacagaacaaagattcttatgaataccc
tgtaggttatggttccgttaatcctagtagaaacttccatgacctccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7670824_7671972
seq2: B6Ng01-312P20.b_48_1186

seq1  GAATTCAGTGTTCATCCTGTGGCATGGCCCAAGAAGCAAATAATATGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTCATCCTGTGGCATGGCCCAAGAAGCAAATAATATGCTG  50

seq1  AATTAAGGAATCAATAATCATGTGCAAACAGGCTATATCATGTACTACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGAATCAATAATCATGTGCAAACAGGCTATATCATGTACTACCC  100

seq1  AAGCCAAGTGCATGCCACATCCTGGCTCATTCAAACTGGGTCCCCTAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAGTGCATGCCACATCCTGGCTCATTCAAACTGGGTCCCCTAGGT  150

seq1  GCTAATTAAACTTACTATCCTGGGCAGAGGACAGCAGAGCCAGGAGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTAAACTTACTATCCTGGGCAGAGGACAGCAGAGCCAGGAGACCA  200

seq1  AATGGAGCTAGCTGACCTTCAAGGGCTTCCCGGGCAAGCATGTAGGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGCTAGCTGACCTTCAAGGGCTTCCCGGGCAAGCATGTAGGAATA  250

seq1  GAGTACTTCTATGACAATTTTACACTACACTGTGCCACAGGCAAGGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTTCTATGACAATTTTACACTACACTGTGCCACAGGCAAGGGTCC  300

seq1  AGTAGATATCTGAAATGACGTTCCTCTTATTTTTAAGGCAGGGATTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATATCTGAAATGACGTTCCTCTTATTTTTAAGGCAGGGATTCTCA  350

seq1  TTCCTTGGTTCCTGTTGTTATGTGAATTCCCAGAGGACACAACTAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGGTTCCTGTTGTTATGTGAATTCCCAGAGGACACAACTAGTATT  400

seq1  TAGAGGAGAAAGGCTTTATCATACCTCCTCCCCCAGTAGATTCCTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGAAAGGCTTTATCATACCTCCTCCCCCAGTAGATTCCTGTGTG  450

seq1  ACACCAAGGAAACACCAGGAGCAAACTTCCCTGGTGATCACTTTGGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAGGAAACACCAGGAGCAAACTTCCCTGGTGATCACTTTGGACCT  500

seq1  CTATGGACTCAACACTATCAGGACCTGCAAACTGTGCTTCACACAAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGACTCAACACTATCAGGACCTGCAAACTGTGCTTCACACAAATCC  550

seq1  TCAGGCCCCATCAAAGGTCCCAGAGCCCCAGTCCTGAACAAAACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCCCATCAAAGGTCCCAGAGCCCCAGTCCTGAACAAAACACACAC  600

seq1  ACATCTACATTCACACACACAGACACAATTAGAATGCCAAATAAATCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTACATTCACACACACAGACACAATTAGAATGCCAAATAAATCCTG  650

seq1  TGAGGTGCCATCTCTCAGAATATTATAAACAATATCAGAGTAAAGCCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGCCATCTCTCAGAATATTATAAACAATATCAGAGTAAAGCCGTG  700

seq1  ATAGCCTGCAGGCATTGCATTCACACACTGAGAGACAGTAAGTGTGAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTGCAGGCATTGCATTCACACACTGAGAGACAGTAAGTGTGAGCA  750

seq1  GGTCCTTCCAGCTGTTTAGAGCAACAATCAGATTGCAAGCACCCCAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTCCAGCTGTTTAGAGCAACAATCAGATTGCAAGCACCCCAAGGT  800

seq1  CAAGTACAAAAGAAGATGATAATAAACACACAGCACCTTGTTTATCCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACAAAAGAAGATGATAATAAACACACAGCACCTTGTTTATCCAAC  850

seq1  AATTAAACACCTGTCAGGGCTACCTAATTG-AATGATGAGAGATGACACA  899
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  AATTAAACACCTGTCA-GGCTACCTAATTGTAATGATGAGAGATGACACA  899

seq1  CTCCATTCATGGAAGGAAATTGGGGTAACAGATGGCAGAATACAGTCAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCATGGAAGGAAATTGGGGTAACAGATGGCAGAATACAGTCAAT  949

seq1  AGGGTACTGG-TCATAATTCCTACCTGTAGTTTAAATCCTCATACATGTA  998
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACTGGTTCATAATTCCTACCTGTAGTTTAAATCCTCATACATGTA  999

seq1  AACATTCAGGATTTCACACATTTCCTTCCTCTCATTGCTGATCTTCCTTA  1048
      ||||||||||||||||||||||||  | |||||| ||||||||| | | |
seq2  AACATTCAGGATTTCACACATTTC--TTCTCTCA-TGCTGATCTCCTTAA  1046

seq1  TATGCAATTTCAGTTCTTCTACTTTATTTATATTTGATA-TCTGATTTGT  1097
      |||||||||||||||| ||||| ||||||||| |||||| ||||||||||
seq2  TATGCAATTTCAGTTC-TCTAC-TTATTTATA-TTGATATTCTGATTTGT  1093

seq1  GATGTTGGAATTTTGGGTTGAAGTATTTCTAGCAGACCCTGCAGATAGAT  1147
      |||||  ||   ||||| |||||   ||||||||||||   |||||||||
seq2  GATGT--GA---TTGGG-TGAAGGTATTCTAGCAGACCTGCCAGATAGAT  1137

seq1  AA  1149
      ||
seq2  AA  1139

seq1: chr14_4907911_4908826
seq2: B6Ng01-312P20.g_321_1217

seq1  AATAGAAGGGTCCAGATCCGGTTCTAATCTGGGGAAGGGGCTCGGTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAGGGTCCAGATCCGGTTCTAATCTGGGGAAGGGGCTCGGTTTGT  50

seq1  GTTTTTTCACGAGATGAAGATGGAGCGCAGTGGCTGCCAGAGAGATTAAT  100
      ||||||||||||||||||||| ||| ||||||||||||||||||||||||
seq2  GTTTTTTCACGAGATGAAGATAGAGTGCAGTGGCTGCCAGAGAGATTAAT  100

seq1  TCCTCAGATGAACACAGATTCTGAATCTTATTACGAGTATCACCTTGAGA  150
      ||||||||||||||||||||||||||||| |||| |||||||||||||| 
seq2  TCCTCAGATGAACACAGATTCTGAATCTTCTTACAAGTATCACCTTGAGG  150

seq1  ACTAAAATTCCTCTTTTGCTTAAAATTCAGCTGGAAACTGAAGCTCCTGG  200
      | |||||||  |||||||||||||||||| ||||||||||||||||||||
seq2  AATAAAATTTTTCTTTTGCTTAAAATTCACCTGGAAACTGAAGCTCCTGG  200

seq1  GAAAGCTGTTTTTCTGCTACTGTCTGAGCCAGCTCCCCAACAGGAGTCCA  250
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  GAAAGCTGTTTTTCTGCTACTCTCTGAGCCAGCTCCCCCACAGGAGTCCA  250

seq1  GAGACTAACCTTAGCATTACAATTTGCAACTGAATAAAGTACCTGAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAACCTTAGCATTACAATTTGCAACTGAATAAAGTACCTGAACTT  300

seq1  CCCCAAAAGAAGCAGGAATCTGGCCCCTCACCCTTCCTTCATAACTGAGT  350
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATGAAGCAGGAATCTGGCCCCTCACCCTTCCTTCATAACTGAGT  350

seq1  GCAGAATAGTAAAAATTAAACCTTGAGCAGAGACCTTTGTCTTGGTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAGAATAGTAAAAATTAAACCTTGAGCAGAGACCTTTGTCTTGGTTACT  400

seq1  TTCTTATCTCTCACAGCCCAGCCCCTCTTCTCTTCCAGGTTTCCAAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATCTCTCACAGCCCAGCCCCTCTTCTCTTCCAGGTTTCCAAAATG  450

seq1  CCTTACCAGGCTAGAGCCCAGGCTGTGATCTGCTGGCCGAATACAACAGC  500
      ||||||||||||||| |||||||||| |||||||||||||||| ||||||
seq2  CCTTACCAGGCTAGAACCCAGGCTGTAATCTGCTGGCCGAATATAACAGC  500

seq1  TTTGTACATAGTTTATATCAAAATCAACTTATTCTATAGTCCAGAACTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACATAGTTTATATCAAAATCAACTTATTCTATAGTCCAGAACTTA  550

seq1  CTTAATCAGTCTGACAGAAATTTTGCACGCTCTGACAAACATCATTCCAT  600
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTAATCAGTCTGACAGAAATTTTGCACCCTCTGACAAACATCATTCCAT  600

seq1  CCATCTTCTACCTTCTTCCTTGGACCATCATTCTCAGAGATGAGAAATTC  650
      || |||||||||||| |||||||||||||||||||||||||||| |||||
seq2  CCCTCTTCTACCTTCCTCCTTGGACCATCATTCTCAGAGATGAGCAATTC  650

seq1  TGAGGGAATCCTAATAGCCCAAAAGGTAGTCATCTTTGGCACTTGATCTT  700
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGAGGGAATCCTAATAGCCCCAAAGGTAGTCATCTTTGGCACTTGATCTT  700

seq1  TAGGAAAGTAGGCAGAGTTCTGCCCCAGATGATTGCAGATGCTCCTCTTT  750
      |||||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  TAGGAAAGTA-GCAGAG-TCTGCCCCAGATGATTGCAGATGCTCCTCTTT  748

seq1  GCCTCCAACTTGTCTGGAAACCTTTGGTCTTACTTCTCCCTTCTCATCTT  800
      |||||||   ||||||| || |||||   ||| | ||| | |||||||||
seq2  GCCTCCA--CTGTCTGGGAAACTTTG---TTA-TACTCTCCTCTCATCTT  792

seq1  ATTTGGAGCT-AGATTCCAATATTTCCACACAGAACAAAGGCTGAAGATT  849
      ||||||| || ||| | ||   |||||||||||||||       ||||||
seq2  ATTTGGACCTAAGAATACATATTTTCCACACAGAACA-------AAGATT  835

seq1  CTTAATGATACCTTGTGGTTTATTGTTTCTGTTTTAAATACTAGGTAGAA  899
      ||||   ||||| ||| | ||| || ||| |||   ||| ||| ||||||
seq2  CTTATGAATACCCTGTAGGTTA-TGGTTCCGTT---AATCCTA-GTAGAA  880

seq1  ACTCCCATGACCTCCCA  916
      ||| |||||||||||||
seq2  ACTTCCATGACCTCCCA  897