BAC Information

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BAC

Clone NameB6Ng01-313G20
Chromosome14 (Build37)
Map Location 23,019,903 - 23,021,018
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313G20.bB6Ng01-313G20.g
ACCGA104644GA104645
length1,1991,092
definitionB6Ng01-313G20.b B6Ng01-313G20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcaattcaggcaaatgggggggaggaatatctatttttaaaag
cagcttaagaaactagcagaagaggaaacagaaaattcaacaggtttgta
tttattgaagaaattgagttactagtttttaaagctttctctttaggaaa
ttggcagacccaaatgatttcacctctaccaaaaatttggaaagacatac
aaaaatttgcacagtgtgcaagagaaaggagagcacttgtgaactcatct
ggagatgagtgacctttctgtctaaatctaagagagcacacggaagggac
aactctccattataaacctagacttcaaaaccttgaaacaacagcgaatg
agaccatgacacgtgtaaaaggggatgaggcatcatgaccaagttattca
tagcctcaaattcaaggtgagtttaatatttgaaaataaaattatcacat
tcagcgttttaacagaaaaaaaaaagaaagaaaaattccacatgacacat
agaagcagaaaaaccatcctgatagaatggggataaaggacatgtgagaa
gagccacatctgatataagcacatggtaacaattgaaagctctctggtaa
gactgaagtcaagtgaggatgcctgctcttgctgtttacgttcagcgtgg
tgtcacgctatctagggcagtgcaataagaaatctgaacaacgattcata
tccagggaaattaattcaacatggatcaaagaccaaaacagaaaagctga
cattctcagaattctaacagggggcaagagaggtggttcagccggtaaat
ttatggctgtgtaatcacgaagacctggcacatacataaaaaggcgagca
ccacaatgagcatctgtaatcccaacaccagagaggaggcagacagggga
ggatctccagggcctgctgaccagccaggctgtgcaaatccatgagattc
gggctcactaacagacctgtctcaaagacagaaaatgactgagagactct
gatattgacctctggtttgtacacacacacacacacacacacacacacaa
acacacagagagattagttggagctaacaaaacaccacttttgatgatct
agattacaccacccaaatgctgctaggtcatactgtgaggaccagattaa
tgggactctgagagtacaacaatccttaacctatgtgccttacctggtc
gaattcctgatgtgcattccagtgacgagactccacagtgtcctgtctca
tttgggtgctggatacataatgcttattttatagaggaagaagttggata
ctctaagtagttaaaggctgggccttccagaagttggtacagcagaaata
actgcttttttctttctgctttaagaagattgttgtcctatattacccac
tttaaaaaataagtttttgccattttaaagcctacagcttggtggctata
tgtccttgtgctttgtgtcacatcaccaccatttatgaccatttcttttt
gttttccctataaaaccaaaacctagtaaccattaatcggtaactcacca
tgtcttcctcccctttagccctgattagcattatgttagtttctgtttct
gtatctctaaacttgattatgcagcacagggtgccttggatggatgaatc
acactgcctatgtccttttttttattttttaaatctggcttcttagcact
gtaagtttttgtcgtgtggcatcttgttttagaatttctttcttttttga
cagaaaattatattctcttgcacatgagcatgccatttagcttccttcca
tgtctgtcactggacactgaggttgctcccatccattgcctgttgtgata
atatgctatgaatgtgggcgtgtacgtgtcttatcagtattgtctatgtg
ttaatggccatctggcttatcaatagttggttaaaacaattttttagaat
ttttgtttttttttaatatatgtacatctgagcttttctgcgtatcttta
tgggtgcctgtggaatcctgaagggggtattatggatactttggagctag
agttacaaatagttatgagatctccaatctatgttctgggatctatactc
tagtcctttgcaagacaaactcttttcttaaccactgagttatcttttca
gtcttcacagtagttttgactactacatgatgtgtctagatgtataaccc
actgtgctctggcatctacataacacttgagtgatctctttcagtgtgat
atgtttcttgtatacatggatagatctctgcttttgtttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23019903_23021018
seq2: B6Ng01-313G20.g_67_1158

seq1  GAATTCCTGATGTGCATTCCAGTGACGAGACTCCACAGTGTCCTGTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATGTGCATTCCAGTGACGAGACTCCACAGTGTCCTGTCTCA  50

seq1  TTTGGGTGCTGGATACATAATGCTTATTTTATAGAGGAAGAAGTTGGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTGCTGGATACATAATGCTTATTTTATAGAGGAAGAAGTTGGATA  100

seq1  CTCTAAGTAGTTAAAGGCTGGGCCTTCCAGAAGTTGGTACAGCAGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGTAGTTAAAGGCTGGGCCTTCCAGAAGTTGGTACAGCAGAAATA  150

seq1  ACTGCTTTTTTCTTTCTGCTTTAAGAAGATTGTTGTCCTATATTACCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTTTTCTTTCTGCTTTAAGAAGATTGTTGTCCTATATTACCCAC  200

seq1  TTTAAAAAATAAGTTTTTGCCATTTTAAAGCCTACAGCTTGGTGGCTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAATAAGTTTTTGCCATTTTAAAGCCTACAGCTTGGTGGCTATA  250

seq1  TGTCCTTGTGCTTTGTGTCACATCACCACCATTTATGACCATTTCTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGTGCTTTGTGTCACATCACCACCATTTATGACCATTTCTTTTT  300

seq1  GTTTTCCCTATAAAACCAAAACCTAGTAACCATTAATCGGTAACTCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCCTATAAAACCAAAACCTAGTAACCATTAATCGGTAACTCACCA  350

seq1  TGTCTTCCTCCCCTTTAGCCCTGATTAGCATTATGTTAGTTTCTGTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCTCCCCTTTAGCCCTGATTAGCATTATGTTAGTTTCTGTTTCT  400

seq1  GTATCTCTAAACTTGATTATGCAGCACAGGGTGCCTTGGATGGATGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCTAAACTTGATTATGCAGCACAGGGTGCCTTGGATGGATGAATC  450

seq1  ACACTGCCTATGTCCTTTTTTTTATTTTTTAAATCTGGCTTCTTAGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCCTATGTCCTTTTTTTTATTTTTTAAATCTGGCTTCTTAGCACT  500

seq1  GTAAGTTTTTGTCGTGTGGCATCTTGTTTTAGAATTTCTTTCTTTTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTTTTGTCGTGTGGCATCTTGTTTTAGAATTTCTTTCTTTTTTGA  550

seq1  CAGAAAATTATATTCTCTTGCACATGAGCATGCCATTTAGCTTCCTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTATATTCTCTTGCACATGAGCATGCCATTTAGCTTCCTTCCA  600

seq1  TGTCTGTCACTGGACACTGAGGTTGCTCCCATCCATTGCCTGTTGTGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCACTGGACACTGAGGTTGCTCCCATCCATTGCCTGTTGTGATA  650

seq1  ATATGCTATGAATGTGGGCGTGTACGTGTCTTATCAGTATTGTCTATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTATGAATGTGGGCGTGTACGTGTCTTATCAGTATTGTCTATGTG  700

seq1  TTAATGGCCATCTGGCTTATCAATAGTTGGTTAAAACAATTTTTTAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGCCATCTGGCTTATCAATAGTTGGTTAAAACAATTTTTTAGAAT  750

seq1  TTTTGTTTTTTTTTAATATATGTACATCTGAGCTTTTCTGCGTATCTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTTAATATATGTACATCTGAGCTTTTCTGCGTATCTTTA  800

seq1  TGGGTGCCTGTGGAATCCTGAAGGGGGTATTATGGATACTTTGGAGCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCCTGTGGAATCCTGAAGGGGGTATTATGGATACTTTGGAGCTAG  850

seq1  AGTTACAAATAGTTATGAGATCTCCAATCTATGTTCTGGGATCTATACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAAATAGTTATGAGATCTCCAATCTATGTTCTGGGATCTATACTC  900

seq1  TAGTCCTTTGCAAGAACAAACTCTTTTCTTAACCACTGAGTTATCTTTTC  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAGTCCTTTGCAAG-ACAAACTCTTTTCTTAACCACTGAGTTATCTTTTC  949

seq1  AGTCTTCACCAGTAGTTTTTGACTACTACCAATGATGTGTCTAGATGTAT  1000
      |||||||| |||||| |||||||||||||  |||||||||||||||||||
seq2  AGTCTTCA-CAGTAG-TTTTGACTACTAC--ATGATGTGTCTAGATGTAT  995

seq1  AAACCCCACTGTGCTTCTTGGGCCATCTACCAATAAACACTTGAGTTGAT  1050
      ||  |||||||||| |||   | |||||||  || |||||||||| ||||
seq2  AA--CCCACTGTGC-TCT---GGCATCTAC--AT-AACACTTGAG-TGAT  1035

seq1  TCTCCTTTTCCAGTGTGAATTATGTTTC-TGTATACATGAGTATAGGAAT  1099
          || || ||||||||  |||||||| |||||||||  | ||||  ||
seq2  ----CTCTTTCAGTGTGA--TATGTTTCTTGTATACAT--GGATAG--AT  1075

seq1  CTCTGCTTTTGTTTTTT  1116
      |||||||||||||||||
seq2  CTCTGCTTTTGTTTTTT  1092