BAC Information

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BAC

Clone NameB6Ng01-313J08
Chromosome14 (Build37)
Map Location 112,262,898 - 112,263,761
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622052, LOC100043491, LOC100043494, Slitrk5
Downstream geneLOC100043501, EG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313J08.bB6Ng01-313J08.g
ACCGA104756GA104757
length8681,191
definitionB6Ng01-313J08.b B6Ng01-313J08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaagctccaaattgcttgtcattgattaaaggggagggggtt
cagtgatgtatttgtgtgtttgttttctttctttgaaattatttttatct
aagttaatttggtgttaattatctgaaaggaaacaaatgagggtgtaaac
acttctacagttggttagcttaatacctagtttttatttttatctgtggt
taaaatgggcaaggcggagtacggacatacagagattccatttacaagtc
cttagagagctacaacggctacacttaggtgtcattatacaatgctagag
aaatggaaaatgaaatgagaaaatatctttattgttctttttctgaaagg
gtcttgcaatgtagctctggttgtcttcaagctcactatatagtccagag
tggcttcaaactcaccgtgatctgtctacatttgcctcccaagtgctggg
attaaaggtgtgcaccattctgcaagactgcaaaagtaatacaatgaaga
ttgctatgactctcttctcttgtttttttttcattttttattaaatattt
tcttcatttacatttcaaatgtaaatcaaatcccctttcctggtttcccc
tctttaaaccccctatcccatccccctccccctactcacaaacccaccca
ctcccacatccatgtcctgccattcccctgcactggggcataaagtcttc
ttaggaccaaggtcctctcctcccattgatgtctaacaatgccatcctct
cctaagtatgcagttggaagttgtgctctctccatgtgtattcctttgtt
ggtgggttaactacctggaagttcttgtgtggaactgattgtgttcataa
ttgtgttccttccactgg
gaattccagggacaagaagcaggattgggtgagtaggggagcaggccgtg
gggagggtatagggaactttccggatagcatttgaaatttgaaatgtata
taaagaaaatatctaataattttttttaaagaagtcttacgaagtctttg
cttccctctggaattttgcctaccttctaaggtaggtacactcaccaagc
tttctgcactcagtggctgttatggcccaaagttaaaaaatatccttcaa
caatcctcaaacaaacaaacaaaacaatgtcaagtctgtcccagtactat
ccttctatcctgatagcaacttttattagtaaggattactactgctttga
tgaaacatcatgactagaagcaagtttagtagggaagtatttatttcact
tcggttctgtatggtagttaatcatcaaaatcagtgaaaacagggactta
atcagggggggaaagatctgaaagcagtagctaattcagagactataggg
tgctgttcactgggttttttgtaacagtttgctcagcattcattcttata
gatcccaggaccattagccaaggaatggcaccaaaacgggctgtgcccac
atcaaccactaattaagaaaatcctccacacctggatcttatagaggcat
tttctcagctgaaggtccctccttttggataactgtctcttctgtcaaga
ttacataaacgcaacagtacatatcctttgggactaacttttcagggtct
acgttcatcataattttgaaatctgtcttcagagtattataatgaaagac
tgttgccagcagtgctggcacatgccttttaatctcagcacatgggagac
agaggcaggcagatttctgagttcgaggccaacctggtctacagagtgtt
ccaggacagccagggctacacagaaaaaacatcctctcataataaataaa
taattcataataaataataattaataataatataatatataatatgatga
tattaatattttttaaagactgtcactaagtttcatcccctggcaaccat
agctccctcagccaccctacgcttgaagtgcctagtttcagtcttgctaa
ttatcaatataaatatggccgtccgaatgagtaattaatcgggaagatcc
cttgtccatgcatctacgaagctcatacgagaaagatgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112262898_112263761
seq2: B6Ng01-313J08.b_45_912

seq1  GAATTCAAAAAGCTCCAAATTGCTTGTCATTGATTAAAGGGGAGGGGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAGCTCCAAATTGCTTGTCATTGATTAAAGGGGAGGGGGTT  50

seq1  CAGTGATGTATTTGTGTGTTTGTTTTCTTTCTTTGAAATTATTTTTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGTATTTGTGTGTTTGTTTTCTTTCTTTGAAATTATTTTTATCT  100

seq1  AAGTTAATTTGGTGTTAATTATCTGAAAGGAAACAAATGAGGGTGTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAATTTGGTGTTAATTATCTGAAAGGAAACAAATGAGGGTGTAAAC  150

seq1  ACTTCTACAGTTGGTTAGCTTAATACCTAGTTTTTATTTTTATCTGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTACAGTTGGTTAGCTTAATACCTAGTTTTTATTTTTATCTGTGGT  200

seq1  TAAAATGGGCAAGGCGGAGTACGGACATACAGAGATTCCATTTACAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGGCAAGGCGGAGTACGGACATACAGAGATTCCATTTACAAGTC  250

seq1  CTTAGAGAGCTACAACGGCTACACTTAGGTGTCATTATACAATGCTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGAGCTACAACGGCTACACTTAGGTGTCATTATACAATGCTAGAG  300

seq1  AAATGGAAAATGAAATGAGAAAATATCTTTATTGTTCTTTTTCTGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAAATGAAATGAGAAAATATCTTTATTGTTCTTTTTCTGAAAGG  350

seq1  GTCTTGCAATGTAGCTCTGGTTGTCTTCAAGCTCACTATATAGTCCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCAATGTAGCTCTGGTTGTCTTCAAGCTCACTATATAGTCCAGAG  400

seq1  TGGCTTCAAACTCACCGTGATCTGTCTACATTTGCCTCCCAAGTGCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCAAACTCACCGTGATCTGTCTACATTTGCCTCCCAAGTGCTGGG  450

seq1  ATTAAAGGTGTGCACCATTCTGCAAGACTGCAAAAGTAATACAATGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGTGTGCACCATTCTGCAAGACTGCAAAAGTAATACAATGAAGA  500

seq1  TTGCTATGACTCTCTTCTCTTGTTTTTTTTTCATTTTTTATTAAATATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATGACTCTCTTCTCTTGTTTTTTTTTCATTTTTTATTAAATATTT  550

seq1  TCTTCATTTACATTTCAAATGTAAATCAAATCCCCTTTCCTGGTTTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTTACATTTCAAATGTAAATCAAATCCCCTTTCCTGGTTTCCCC  600

seq1  TCTTTAAACCCCCTATCCCATCCCCCTCCCCCTACTCACAAACCCACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAACCCCCTATCCCATCCCCCTCCCCCTACTCACAAACCCACCCA  650

seq1  CTCCCACTTCCATGTCCTGCCATTCCCCTGCACTGGGGCATAGAGTCTTC  700
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  CTCCCACATCCATGTCCTGCCATTCCCCTGCACTGGGGCATAAAGTCTTC  700

seq1  TTAGGACCAAGGTCCTCTCCTCCCATTGATGTCTAACAATGCCATCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACCAAGGTCCTCTCCTCCCATTGATGTCTAACAATGCCATCCTCT  750

seq1  CCTAAGTATGCAGTTGG-AGTTGTGCTTCTCTCCATGTGTATTCTTTGGT  799
      ||||||||||||||||| |||||||| ||||||||||||||||| || ||
seq2  CCTAAGTATGCAGTTGGAAGTTGTGC-TCTCTCCATGTGTATTCCTTTGT  799

seq1  TGGT-GGTTTACTACCTGGAAGTTC-TGTG-GGAACTGATTG-GTTCATA  845
      |||| |||| ||||||||||||||| |||| ||||||||||| |||||||
seq2  TGGTGGGTTAACTACCTGGAAGTTCTTGTGTGGAACTGATTGTGTTCATA  849

seq1  TTGTTGTTCCTTCTACTGG  864
       |  ||||||||| |||||
seq2  ATTGTGTTCCTTCCACTGG  868