BAC Information

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BAC

Clone NameB6Ng01-315F11
Chromosome14 (Build37)
Map Location 7,510,268 - 7,511,363
singlet/doubletsinglet
Overlap geneLOC100042077
Upstream geneLOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664
Downstream geneLOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315F11.bB6Ng01-315F11.g
ACCGA106018GA106019
length4521,090
definitionB6Ng01-315F11.b B6Ng01-315F11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acatgatatgtacccactaataagtggatattagcccagaaatttagaaa
acccaaggtatgagatacaatatgcaaaacacaagaaactcaagaataac
taagaccaaagtgtggacactttgcacctttttataattgggaacaaaac
acccatggaaggagttacagagacaaaatttggagctgagaagaaaggat
gtaccatctagaaactgccatagaagtggttgctcacagtcagctattgg
atggatcacagggcccccaatggaggagctagagaaagtacccaaggagc
taaagggatctgaaaccctctaggtggaacaacaatatgaactaaccagt
accctctcccccttcacccctcctccggagatcatgtctcaatctgcata
tgtatcagaagataccctagttggccatcagtggaaagagaggcaccttg
tt
gaattcagtagccagctcctaaggcctgtagctttgaaaagcaaagccag
tctaagctggttcctgctaagtaaatgactgcaactcaacagcatctgca
gctgtagaggaaacccaggatgggtggaaatactgtgtaggcaaagaaag
gaaagctgcctcatttcccactaaaggcagctcaggggaaaagcctggtg
gaagcccattgcttctgagaaactttcaaggaatccccaatttaaaatag
tttctgacctactaactgcttctcctagttaaaagtgttcacaatggttc
tctgacctaagggacatccacttgtcttttctttgttcagtttgtttctt
tgttttgagggagtcccctagcacacctcaggcccaatctgacttagcat
ttatggcaggtctccagcatcaaactctatttctcaatatggctactaca
atttcaaatacatggcatattgtctcatttggtttataaaaagttccttg
actttctttagtgttttagattttcaaataatttctcccctgctgctcat
gaaatcccttttattactgttactttgagatcttcattggtgagccattg
tagtgcacaactttggttacagaattccagaggcagaggccagcagacct
ttgaaatgtgaggccagcctgggctatacaatgaaacttctatgtagaac
atatcaataatcttgttgaaagcttgcatgttggagtttaaggtatgagt
gctgccaagagctggaagccagtctgggctacattgtaacaggcccgcaa
gagctacacagcaaattcttgtttcaaacaaacaaacaaaagcaagaaag
agtcttggccatacagtctatagatgctacagtcagggttaaatagaaag
gagtaaagctgacctctccagtcagttttctacttaataaggtgccatac
caccacccccaagtacaagaagaacatgagccaagctgattaatcttatg
gacactctattactactacagttattctgaactaatcaatgctcacagca
gaatcatgagacactttaagtgtctaactccatgtctaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7510268_7511363
seq2: B6Ng01-315F11.g_66_1155

seq1  GAATTCAGTAGCCAGCTCCTAAGGCCTGTAGCTTTGAAAAGCAAAGCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCCAGCTCCTAAGGCCTGTAGCTTTGAAAAGCAAAGCCAG  50

seq1  TCTAAGCTGGTTCCTGCTAAGTAAATGACTGCAACTCAACAGCATCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCTGGTTCCTGCTAAGTAAATGACTGCAACTCAACAGCATCTGCA  100

seq1  GCTGTAGAGGAAACCCAGGATGGGTGGAAATACTGTGTAGGCAAAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGAGGAAACCCAGGATGGGTGGAAATACTGTGTAGGCAAAGAAAG  150

seq1  GAAAGCTGCCTCATTTCCCACTAAAGGCAGCTCAGGGGAAAAGCCTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGCCTCATTTCCCACTAAAGGCAGCTCAGGGGAAAAGCCTGGTG  200

seq1  GAAGCCCATTGCTTCTGAGAAACTTTCAAGGAATCCCCAATTTAAAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCATTGCTTCTGAGAAACTTTCAAGGAATCCCCAATTTAAAATAG  250

seq1  TTTCTGACCTACTAACTGCTTCTCCTAGTTAAAAGTGTTCACAATGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACCTACTAACTGCTTCTCCTAGTTAAAAGTGTTCACAATGGTTC  300

seq1  TCTGACCTAAGGGACATCCACTTGTCTTTTCTTTGTTCAGTTTGTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTAAGGGACATCCACTTGTCTTTTCTTTGTTCAGTTTGTTTCTT  350

seq1  TGTTTTGAGGGAGTCCCCTAGCACACCTCAGGCCCAATCTGACTTAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGAGGGAGTCCCCTAGCACACCTCAGGCCCAATCTGACTTAGCAT  400

seq1  TTATGGCAGGTCTCCAGCATCAAACTCTATTTCTCAATATGGCTACTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCAGGTCTCCAGCATCAAACTCTATTTCTCAATATGGCTACTACA  450

seq1  ATTTCAAATACATGGCATATTGTCTCATTTGGTTTATAAAAAGTTCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATACATGGCATATTGTCTCATTTGGTTTATAAAAAGTTCCTTG  500

seq1  ACTTTCTTTAGTGTTTTAGATTTTCAAATAATTTCTCCCCTGCTGCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTAGTGTTTTAGATTTTCAAATAATTTCTCCCCTGCTGCTCAT  550

seq1  GAAATCCCTTTTATTACTGTTACTTTGAGATCTTCATTGGTGAGCCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCCTTTTATTACTGTTACTTTGAGATCTTCATTGGTGAGCCATTG  600

seq1  TAGTGCACAACTTTGGTTACAGAATTCCAGAGGCAGAGGCCAGCAGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCACAACTTTGGTTACAGAATTCCAGAGGCAGAGGCCAGCAGACCT  650

seq1  TTGAAATGTGAGGCCAGCCTGGGCTATACAATGAAACTTCTATGTAGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGTGAGGCCAGCCTGGGCTATACAATGAAACTTCTATGTAGAAC  700

seq1  ATATCAATAATCTTGTTGAAAGCTTGCATGTTGGAGTTTAAGGTATGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATAATCTTGTTGAAAGCTTGCATGTTGGAGTTTAAGGTATGAGT  750

seq1  GCTGCCAAGAGCTGGAAGCCAGTCTGGGCTACATTGTAACAGGCCCGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAAGAGCTGGAAGCCAGTCTGGGCTACATTGTAACAGGCCCGCAA  800

seq1  GAGCTACACAGCAAATTCTTGTTTCAAACAAACAAACAAAAGCAAGAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACACAGCAAATTCTTGTTTCAAACAAACAAACAAAAGCAAGAAAG  850

seq1  AGTCTTGGCCATACAGTCTATAGATGCTACAGTCAGGGTTAAATAGAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGGCCATACAGTCTATAGATGCTACAGTCAGGGTTAAATAGAAAG  900

seq1  GAGTAAAGCTGACCTCTCCAGTCAGTTTTCTACTTAATAAGGTGCCATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGCTGACCTCTCCAGTCAGTTTTCTACTTAATAAGGTGCCATAC  950

seq1  CACCACCCCCAAAGTACAAGA--GACATGAGCCAAAGCTGATTAAATCTT  998
      |||||||||| ||||||||||   ||||||||| ||||||||| |||| |
seq2  CACCACCCCC-AAGTACAAGAAGAACATGAGCC-AAGCTGATT-AATC-T  996

seq1  TATGAACACTCTATTACTACTTACAGTTATTCTGAACTAATCAATTGCTC  1048
      |||| ||||||||||||||| ||||||||||||||||||||||| |||||
seq2  TATGGACACTCTATTACTAC-TACAGTTATTCTGAACTAATCAA-TGCTC  1044

seq1  ACAAGCAGAATCATGAGACACTTAAAGTGTCTAATCCCATGTTCTAAG  1096
      || |||||||||||||||||||| ||||||||||  ||||| ||||||
seq2  AC-AGCAGAATCATGAGACACTTTAAGTGTCTAACTCCATG-TCTAAG  1090