BAC Information

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BAC

Clone NameB6Ng01-316P01
Chromosome14 (Build37)
Map Location 98,812,285 - 98,904,052
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668659, Dach1
Downstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316P01.bB6Ng01-316P01.g
ACCGA107211GA107212
length1,166968
definitionB6Ng01-316P01.b B6Ng01-316P01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,902,889 - 98,904,052)(98,812,285 - 98,813,251)
sequence
gaattcatttgggtatctgaggtaacacttaaatgctccatttcaacgcc
acaaatccttttaatacacgctgaagacatcaacagcccctaaatctgct
gtggagaagggaagttcatatttgttgagccctggttatgataggcttga
acagtttcccataaagaaacaaggtctgtgtgattacgctgctgcgcatg
ggctgagcctggctgaacgctgctccccggaagcctaattgacaattgtg
ttgcccttctcgtgactatttaagaagagttgtgaggtcagcgtcaatga
tacttctcctggtcataaatgccatccggccagacttcccccattccccc
gcccccaacctgttctttcgaaggctgcagtgtcaaatatttaaaactac
aatgttttacaggagagaaggacactgctgacccacatttcagaagcaaa
atgagaactacaggggtcagatcccagccactgggaacacgatgaacacg
tgggctgtaaatgaagtagtgaaagcgaccaccggaacagcaattttcat
aaccaggacactctagtaaaatgaattttgtcatatcccatgacctctgc
aagtttctgaaccaaactcttcaatgagcattaaagggaaaaacacatac
ggtgaccctagtaaacggcagaatgagtccaaatcgcaccacttttaaaa
attaaactgaacggtagactgcgattaatatgggcagtgatttaatttaa
ttgatcaagtactttcattcctcgaaattttctttgttccataagttggt
agggtcatagcctcaaatttttttttaattggaagttttagtacaaaggg
gtggaattcagttatccaatcattaaatcttaagactaaaagcacattac
acaacagtaactagatattttcaaatatatactattgttttccaatgtat
aagaaggtgtatttcttttcttttcaccttatagctaaatagtctaataa
atactttggaaaatcagagcagtttggatacttcccctgcatgttttaga
atcaaaaacaatccattggaaaaacacattgttttgccttgttcttgaaa
aataatacctatattccaatatataaagctcaattcatcgtaatctagag
tctttcaatgtttcta

gaattcagtagacatcaaacttccttagccacattctctggggttatgca
ataagaataaaatatcaaaatatgcataatttcttatctaaaagacaata
tttggttccttctacaagggtttattgtatttgagatctctggatcaagt
cagaaatgtttcattaacaactctgtacaaaattaactctagttgaaatt
catttccattgccttttaaagaataacagagttggtttgactccgttgac
caagcctctgagtaacctgtcatcaggtaaagtctttttgtatattctgg
agatcaaattcaaagttccatggtttctacaagcctgctttactgatatg
ttatctctgcagctcattttcatagacttttatgcagatctcacagtgcc
ccattcttatccaccttcacctgtaagccagttttaaaagaaacatatac
acattaaaataaatgcatcaaattatggttgaatgagatcttcacagttt
tccaatttactggcaataacaaaatatgtgtgcatacgggcctcaaaata
aattagttgcatagttttgtgcactttaatgtatatgtaaaaatgctttc
agattagtgaaactaaacatggttaacaatttgttcacaatttaaatttt
aatgtgttatttctttggcttaaaataacaaacttaaaatatccattata
aataaagagaaacgtgagtaaacaaaaacaccttatattttagtagcttc
ataattacttatcctgctttttaaaggtaggtttcatttgttcacttatg
ctgggcaggctaacttgtttttctgattctgagtattatttaagaaaacc
taatagtttaaaacactttagccttacagcataaaagctttttttaaaaa
aatgtatgagtatggttatagttgtataaaaaatcacaatgtataacttt
atatgtgagtggtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98902889_98904052
seq2: B6Ng01-316P01.b_46_1211 (reverse)

seq1  TAGAAACA-TGAAAGACTCTTAGAAATAAAGAAATGATATGAGCTTTATA  49
      |||||||| |||||||||||   | || | |  ||||  |||||||||||
seq2  TAGAAACATTGAAAGACTCT---AGATTACG--ATGAATTGAGCTTTATA  45

seq1  TATTGAATTATA-GTA-TATTTTTCAAAGAACAAAGCAAAACAATGTG-T  96
      ||||| | |||| ||| |||||||| |||||||| ||||||||||||| |
seq2  TATTGGAATATAGGTATTATTTTTC-AAGAACAAGGCAAAACAATGTGTT  94

seq1  TTTCAAATGGAT--GTTTTGATTCTAAAACATGCAGGGGAAGTATCCAAA  144
      |||| |||||||   |||||||||||||||||||||||||||||||||||
seq2  TTTCCAATGGATTGTTTTTGATTCTAAAACATGCAGGGGAAGTATCCAAA  144

seq1  CTGCTTCTGATTTT-CAAAGTATTTA-TAGACTATTTAGCTATAAGGTGA  192
      |||| ||||||||| ||||||||||| |||||||||||||||||||||||
seq2  CTGC-TCTGATTTTCCAAAGTATTTATTAGACTATTTAGCTATAAGGTGA  193

seq1  AAAGAAAAGAAATACACCTTCTTATACATTGGAAAACAATAGTATATATT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGAAATACACCTTCTTATACATTGGAAAACAATAGTATATATT  243

seq1  TGAAAATATCTAGTTACTGTTGTGTAATGTGCTTTTAGTCTTAAGATTTA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATATCTAGTTACTGTTGTGTAATGTGCTTTTAGTCTTAAGATTTA  293

seq1  ATGATTGGATAACTGAATTCCACCCCTTTGTACTAAAACTTCCAATT-AA  341
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGATTGGATAACTGAATTCCACCCCTTTGTACTAAAACTTCCAATTAAA  343

seq1  AAAAAATTTGAGGCTATGACCCTACCAACTTATGGAACAAAGAAAATTTC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTTGAGGCTATGACCCTACCAACTTATGGAACAAAGAAAATTTC  393

seq1  GAGGAATGAAAGTACTTGATCAATTAAATTAAATCACTGCCCATATTAAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATGAAAGTACTTGATCAATTAAATTAAATCACTGCCCATATTAAT  443

seq1  CGCAGTCTACCGTTCAGTTTAATTTTTAAAAGTGGTGCGATTTGGACTCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGTCTACCGTTCAGTTTAATTTTTAAAAGTGGTGCGATTTGGACTCA  493

seq1  TTCTGCCGTTTACTAGGGTCACCGTATGTGTTTTTCCCTTTAATGCTCAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCGTTTACTAGGGTCACCGTATGTGTTTTTCCCTTTAATGCTCAT  543

seq1  TGAAGAGTTTGGTTCAGAAACTTGCAGAGGTCATGGGATATGACAAAATT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGTTTGGTTCAGAAACTTGCAGAGGTCATGGGATATGACAAAATT  593

seq1  CATTTTACTAGAGTGTCCTGGTTATGAAAATTGCTGTTCCGGTGGTCGCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTACTAGAGTGTCCTGGTTATGAAAATTGCTGTTCCGGTGGTCGCT  643

seq1  TTCACTACTTCATTTACAGCCCACGTGTTCATCGTGTTCCCAGTGGCTGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTACTTCATTTACAGCCCACGTGTTCATCGTGTTCCCAGTGGCTGG  693

seq1  GATCTGACCCCTGTAGTTCTCATTTTGCTTCTGAAATGTGGGTCAGCAGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGACCCCTGTAGTTCTCATTTTGCTTCTGAAATGTGGGTCAGCAGT  743

seq1  GTCCTTCTCTCCTGTAAAACATTGTAGTTTTAAATATTTGACACTGCAGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCTCTCCTGTAAAACATTGTAGTTTTAAATATTTGACACTGCAGC  793

seq1  CTTCGAAAGAACAGGTTGGGGGCGGGGGAATGGGGGAAGTCTGGCCGGAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGAAAGAACAGGTTGGGGGCGGGGGAATGGGGGAAGTCTGGCCGGAT  843

seq1  GGCATTTATGACCAGGAGAAGTATCATTGACGCTGACCTCACAACTCTTC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTATGACCAGGAGAAGTATCATTGACGCTGACCTCACAACTCTTC  893

seq1  TTAAATAGTCACGAGAAGGGCAACACAATTGTCAATTAGGCTTCCGGGGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGTCACGAGAAGGGCAACACAATTGTCAATTAGGCTTCCGGGGA  943

seq1  GCAGCGTTCAGCCAGGCTCAGCCCATGCGCAGCAGCGTAATCACACAGAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGTTCAGCCAGGCTCAGCCCATGCGCAGCAGCGTAATCACACAGAC  993

seq1  CTTGTTTCTTTATGGGAAACTGTTCAAGCCTATCATAACCAGGGCTCAAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTCTTTATGGGAAACTGTTCAAGCCTATCATAACCAGGGCTCAAC  1043

seq1  AAATATGAACTTCCCTTCTCCACAGCAGATTTAGGGGCTGTTGATGTCTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAACTTCCCTTCTCCACAGCAGATTTAGGGGCTGTTGATGTCTT  1093

seq1  CAGCGTGTATTAAAAGGATTTGTGGCGTTGAAATGGAGCATTTAAGTGTT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGTATTAAAAGGATTTGTGGCGTTGAAATGGAGCATTTAAGTGTT  1143

seq1  ACCTCAGATACCCAAATGAATTC  1164
      |||||||||||||||||||||||
seq2  ACCTCAGATACCCAAATGAATTC  1166


seq1: chr14_98812285_98813251
seq2: B6Ng01-316P01.g_65_1032

seq1  GAATTCAGTAGACATCAAACTTCCTTAGCCACATTCTCTGGGGTTATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGACATCAAACTTCCTTAGCCACATTCTCTGGGGTTATGCA  50

seq1  ATAAGAATAAAATATCAAAATATGCATAATTTCTTATCTAAAAGACAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAATAAAATATCAAAATATGCATAATTTCTTATCTAAAAGACAATA  100

seq1  TTTGGTTCCTTCTACAAGGGTTTATTGTATTTGAGATCTCTGGATCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTCCTTCTACAAGGGTTTATTGTATTTGAGATCTCTGGATCAAGT  150

seq1  CAGAAATGTTTCATTAACAACTCTGTACAAAATTAACTCTAGTTGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGTTTCATTAACAACTCTGTACAAAATTAACTCTAGTTGAAATT  200

seq1  CATTTCCATTGCCTTTTAAAGAATAACAGAGTTGGTTTGACTCCGTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCATTGCCTTTTAAAGAATAACAGAGTTGGTTTGACTCCGTTGAC  250

seq1  CAAGCCTCTGAGTAACCTGTCATCAGGTAAAGTCTTTTTGTATATTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTCTGAGTAACCTGTCATCAGGTAAAGTCTTTTTGTATATTCTGG  300

seq1  AGATCAAATTCAAAGTTCCATGGTTTCTACAAGCCTGCTTTACTGATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAATTCAAAGTTCCATGGTTTCTACAAGCCTGCTTTACTGATATG  350

seq1  TTATCTCTGCAGCTCATTTTCATAGACTTTTATGCAGATCTCACAGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGCAGCTCATTTTCATAGACTTTTATGCAGATCTCACAGTGCC  400

seq1  CCATTCTTATCCACCTTCACCTGTAAGCCAGTTTTAAAAGAAACATATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTATCCACCTTCACCTGTAAGCCAGTTTTAAAAGAAACATATAC  450

seq1  ACATTAAAATAAATGCATCAAATTATGGTTGAATGAGATCTTCACAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAAATAAATGCATCAAATTATGGTTGAATGAGATCTTCACAGTTT  500

seq1  TCCAATTTACTGGCAATAACAAAATATGTGTGCATACGGGCCTCAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTTACTGGCAATAACAAAATATGTGTGCATACGGGCCTCAAAATA  550

seq1  AATTAGTTGCATAGTTTTGTGCACTTTAATGTATATGTAAAAATGCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTTGCATAGTTTTGTGCACTTTAATGTATATGTAAAAATGCTTTC  600

seq1  AGATTAGTGAAACTAAACATGGTTAACAATTTGTTCACAATTTAAATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGTGAAACTAAACATGGTTAACAATTTGTTCACAATTTAAATTTT  650

seq1  AATGTGTTATTTCTTTGGCTTAAAATAACAAACTTAAAATATCCATTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTATTTCTTTGGCTTAAAATAACAAACTTAAAATATCCATTATA  700

seq1  AATAAAGAGAAACGTGAGTAAACAAAAACACCTTATATTTTAGTAGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAGAAACGTGAGTAAACAAAAACACCTTATATTTTAGTAGCTTC  750

seq1  ATAATTACTTATCCTGCTTTTTAAAGGTAGGTTTCATTTGTTCACTTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTACTTATCCTGCTTTTTAAAGGTAGGTTTCATTTGTTCACTTATG  800

seq1  CTGGGCAGGCTAACTTGTTTTTCTGATTCTGAGTATTATTTAAGAAAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAGGCTAACTTGTTTTTCTGATTCTGAGTATTATTTAAGAAAACC  850

seq1  TAATAGTTTAAAACACTTTAGCCTTACAGCATAAAAGC-TTTTTTAAAAA  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAATAGTTTAAAACACTTTAGCCTTACAGCATAAAAGCTTTTTTTAAAAA  900

seq1  AATGTATGAGTATGGTTATAGTTGTATAAAAAATCACAATGTATAACTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGAGTATGGTTATAGTTGTATAAAAAATCACAATGTATAACTTT  950

seq1  ATATGTGAGTGGTGTGTG  967
      ||||||||||||||||||
seq2  ATATGTGAGTGGTGTGTG  968


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