BAC Information

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BAC

Clone NameB6Ng01-317E24
Chromosome14 (Build37)
Map Location 109,056,989 - 109,058,159
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1, LOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317E24.bB6Ng01-317E24.g
ACCGA107489GA107490
length1,2181,171
definitionB6Ng01-317E24.b B6Ng01-317E24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagaacaatgtaactgatcaaattatgtattggatattctgta
atatcagcttttacagcttaagctgcataatgtagtgtccaattttgaca
atttgacattaactagaatcattgaaggagagggatcctcaattgagaaa
atcctccaaaagcctgcagtgttcagtgttctctctctctctctgtctct
ctctctctgcctctctctctctctcttcattttatagctaagtcctggtt
gagctcatgtccttctccttaccaacccatctctcaagtcactgcaagat
tagatagatcctctccctctaagtccctctaagtccagtgaggagaacag
aacccacatgcagagcaatgcctgctccagttgttcgcacatgaagacag
actccacatctgctgcagaagtgtgagggtggagctaagacccagctctt
gcattttctttaattcatggttcagtctctgggagactctactagtcctg
gttagttgactctgttagttttcttgtggagtctctaacccatccaggtt
tcttaatcttttctgcaaggattacacaggactctagagtatcctctaaa
gtttgactgtgggtctctgcatcagtcaactgctgggtggatcctctcag
aggacagccatgtaagcataaccaaatttcattagttttatcatggattg
gttcttgcccatgggatggctctcagatttggagagttattgaatggcaa
aataggctgaggaagccataaagataaagacagtaagcagaaatctttca
tgccatctgcatcagctcctgcttaagttccttccttgatttccttctgg
gatagacagtgacatggaaatctaagccaggtaaacactttctcctcaaa
ttgcatttgggccatggtgtatcaacatggtcagagtgaaccttactaat
acacataactttaatgtaaattatgtaatcttccataccattaatctaga
ctaatgtatgtgttgtataatattttctgaaagtagccaaatttttggaa
ggaaataataaaacaaatacctaactataataattggaggctatttccat
attagctggtaaataggccctcctgcagcctggagtgtctattctttggt
aaccttggtagtaagtaacttccttgtaaaacatatctagaattcttctc
ggaaagagagctcactct

gaattctctaataaaccaggaagagagtgaaatggtaaatacagcttgca
tctgttgaccaattacgagttttacattttctcaggggaagaaataccct
gaaactatctaattttacaatgccaaagcagaatactacgaaacaaaatg
tagcttttgtgtaatgataaaagcatcaaagcttcttccttaattgtgat
aatttgggacaaattagggagtcttgcagtgagcagtagactagtcacac
acccctaagtgctcttaatcaatgtgcagggttgcttgctgagcaggact
ctgaaaaccaagagcctttattaaagacaaggtcaacatagaaaggcaag
gcttgattttctttatcccttttcttttgtgtatttttgggtaagaattt
ttttttaaaatataaactgactaatcagtccatgatatgtctcattacag
tttattcttgtttgcatttttcgaattctttatagaatggctaggtttac
cccatgtcaatagtataatttcaattggaatttttgtgtaaaagcctgta
gcatgatgcctttacgacataattacagttagcatcatttctttgtccag
aatctgtataaatgtgatttgcttgcttcccctttcagcttagctgtaga
accactgtggcatcctggtttttggagatcccttgatccacattctgctt
gtttatgtggaacaacaagcatttgatgctgttactcactagagctcagc
aaaggatcaaggaaggaagtgtgggaattgcaatcggtactgcaaatcca
gggcaagcagcagaaaattacagaaaacagtcttctcttagagacagcta
ttgttaaagtaaatgctcccagatagattcttttacagatacgtattcct
ataaaatcatttaagaaacaaaatcaaacatatcctcctccaaacaaaaa
acaagttaaacagttttgtgttccttttagtaataaatttattcttagat
gatcataacacaataattccataggatacatgatgattactcacatccat
cttcctctctcacttcttccatcctgagccaccatattaatatgggtaat
gaataaagtcacttttcctccatctaaattgtgtttgggctttctttgga
ctccactggactttaatggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109056989_109058159
seq2: B6Ng01-317E24.g_66_1236

seq1  GAATTCTCTAATAAACCAGGAAGAGAGTGAAATGGTAAATACAGCTTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATAAACCAGGAAGAGAGTGAAATGGTAAATACAGCTTGCA  50

seq1  TCTGTTGACCAATTACGAGTTTTACATTTTCTCAGGGGAAGAAATACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGACCAATTACGAGTTTTACATTTTCTCAGGGGAAGAAATACCCT  100

seq1  GAAACTATCTAATTTTACAATGCCAAAGCAGAATACTACGAAACAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATCTAATTTTACAATGCCAAAGCAGAATACTACGAAACAAAATG  150

seq1  TAGCTTTTGTGTAATGATAAAAGCATCAAAGCTTCTTCCTTAATTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTTGTGTAATGATAAAAGCATCAAAGCTTCTTCCTTAATTGTGAT  200

seq1  AATTTGGGACAAATTAGGGAGTCTTGCAGTGAGCAGTAGACTAGTCACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGGACAAATTAGGGAGTCTTGCAGTGAGCAGTAGACTAGTCACAC  250

seq1  ACCCCTAAGTGCTCTTAATCAATGTGCAGGGTTGCTTGCTGAGCAGGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTAAGTGCTCTTAATCAATGTGCAGGGTTGCTTGCTGAGCAGGACT  300

seq1  CTGAAAACCAAGAGCCTTTATTAAAGACAAGGTCAACATAGAAAGGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACCAAGAGCCTTTATTAAAGACAAGGTCAACATAGAAAGGCAAG  350

seq1  GCTTGATTTTCTTTATCCCTTTTCTTTTGTGTATTTTTGGGTAAGAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATTTTCTTTATCCCTTTTCTTTTGTGTATTTTTGGGTAAGAATTT  400

seq1  TTTTTTAAAATATAAACTGACTAATCAGTCCATGATATGTCTCATTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAATATAAACTGACTAATCAGTCCATGATATGTCTCATTACAG  450

seq1  TTTATTCTTGTTTGCATTTTTCGAATTCTTTATAGAATGGCTAGGTTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTTGTTTGCATTTTTCGAATTCTTTATAGAATGGCTAGGTTTAC  500

seq1  CCCATGTCAATAGTATAATTTCAATTGGAATTTTTGTGTAAAAGCCTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTCAATAGTATAATTTCAATTGGAATTTTTGTGTAAAAGCCTGTA  550

seq1  GCATGATGCCTTTACGACATAATTACAGTTAGCATCATTTCTTTGTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATGCCTTTACGACATAATTACAGTTAGCATCATTTCTTTGTCCAG  600

seq1  AATCTGTATAAATGTGATTTGCTTGCTTCCCCTTTCAGCTTAGCTGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTATAAATGTGATTTGCTTGCTTCCCCTTTCAGCTTAGCTGTAGA  650

seq1  ACCACTGTGGCATCCTGGTTTTTGGAGATCCCTTGATCCACATTCTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGTGGCATCCTGGTTTTTGGAGATCCCTTGATCCACATTCTGCTT  700

seq1  GTTTATGTGGAACAACAAGCATTTGATGCTGTTACTCACTAGAGCTCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGTGGAACAACAAGCATTTGATGCTGTTACTCACTAGAGCTCAGC  750

seq1  AAAGGATCAAGGAAGGAAGTGTGGGAATTGCAATCGGTACTGCAAATCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATCAAGGAAGGAAGTGTGGGAATTGCAATCGGTACTGCAAATCCA  800

seq1  GGGCAAGCAGCAGAAAATTACAGAAAACAGTCTTCTCTTAGAGACAGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGCAGCAGAAAATTACAGAAAACAGTCTTCTCTTAGAGACAGCTA  850

seq1  TTGTTAAAGTAAATGCTCCCAGATAGATTCTTTTACAGATACGTATTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAAGTAAATGCTCCCAGATAGATTCTTTTACAGATACGTATTCCT  900

seq1  ATAAAATCATTTAAGAAACAAAATCAAACATATCCTCCTCCCAAACAAAA  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATAAAATCATTTAAGAAACAAAATCAAACATATCCTCCT-CCAAACAAAA  949

seq1  AACAAGTTAAACAGTTTTTGTGTTCCTTTTAGTTAAATAAATTTATTCTT  1000
      |||||||||||||| ||||||||||||||||||  |||||||||||||||
seq2  AACAAGTTAAACAG-TTTTGTGTTCCTTTTAGT--AATAAATTTATTCTT  996

seq1  AGATGATCAT-ACAC-ATAATTCCATAGGATACATGATGATTACTCACAT  1048
      |||||||||| |||| ||||||||||||||||||||||||||||||||||
seq2  AGATGATCATAACACAATAATTCCATAGGATACATGATGATTACTCACAT  1046

seq1  CCATCTTCCTCTCTCACCTTCTTCCCATCCTGAGCCACCATATTAATAT-  1097
      |||||||||||||||| |||||| ||||||||||||||||||||||||| 
seq2  CCATCTTCCTCTCTCA-CTTCTT-CCATCCTGAGCCACCATATTAATATG  1094

seq1  GGTAATGA--TAAGTCACTTTT-CTCCATCTATAT--TGTTTTGGCTTTC  1142
      ||||||||   ||||||||||| ||||||||| ||  ||||| |||||||
seq2  GGTAATGAATAAAGTCACTTTTCCTCCATCTAAATTGTGTTTGGGCTTTC  1144

seq1  TTTTGTGACT-CACT-GACTTTAAAATGGAA  1171
      |||   |||| |||| ||||||  |||||||
seq2  TTT--GGACTCCACTGGACTTT--AATGGAA  1171


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