This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
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BAC Information
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Search Result
BAC
Clone Name
B6Ng01-317N01
Chromosome
14 (Build37)
Map Location
98,253,098 - 98,430,057
singlet/doublet
doublet
Overlap gene
Dach1
Upstream gene
LOC668654
,
EG668659
Downstream gene
LOC635593
,
LOC619716
,
LOC100043787
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC668654
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668654
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
EG668659
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:668659
MGI:3646050
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins
pseudo
: _no_value
name
Dach1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:13134
MGI:1277991
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs
name
LOC635593
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:635593
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 210 ESTs, 1 Protein
name
LOC619716
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:619716
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins
pseudo
: _no_value
name
LOC100043787
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100043787
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 496 ESTs, 6 Proteins
name
Dach1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:84370381
GeneID:13134
MGI:1277991
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: dachshund 1 (Drosophila)
transcript_id
: NM_001038610.1
name
Dach1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:84370383
GeneID:13134
MGI:1277991
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: dachshund 1 (Drosophila)
transcript_id
: NM_007826.2
name
LOC635593
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149265735
GeneID:635593
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 210 ESTs, 1 Protein
product
: similar to eukaryotic translation elongation factor 1 alpha 1-like 14
transcript_id
: XM_001480074.1
name
LOC100043787
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149265831
GeneID:100043787
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 496 ESTs, 6 Proteins
product
: similar to ribosomal protein L36a
transcript_id
: XM_001480964.1
name
Dach1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:84370382
GeneID:13134
MGI:1277991
definition
GO_component
: GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA]
GO_function
: GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]
GO_process
: GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IDA] [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]
codon_start
: 1
note
: isoform 2 is encoded by transcript variant 2
product
: dachshund 1 isoform 2
protein_id
: NP_001033699.1
name
Dach1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:6681129
GeneID:13134
MGI:1277991
definition
GO_component
: GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA]
GO_function
: GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]
GO_process
: GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IDA] [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]
codon_start
: 1
note
: isoform 1 is encoded by transcript variant 1
product
: dachshund 1 isoform 1
protein_id
: NP_031852.1
name
LOC635593
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149265736
GeneID:635593
definition
codon_start
: 1
product
: similar to eukaryotic translation elongation factor 1 alpha 1-like 14
protein_id
: XP_001480124.1
name
LOC100043787
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149265832
GeneID:100043787
definition
codon_start
: 1
product
: similar to ribosomal protein L36a
protein_id
: XP_001481014.1
name
LOC668654
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668654
definition
number
: 1
pseudo
: _no_value
name
LOC668654
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668654
definition
number
: 2
pseudo
: _no_value
name
LOC668654
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668654
definition
number
: 3
pseudo
: _no_value
name
LOC668654
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668654
definition
number
: 4
pseudo
: _no_value
name
LOC668654
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668654
definition
number
: 5
pseudo
: _no_value
name
EG668659
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668659
definition
number
: 1
pseudo
: _no_value
name
LOC619716
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:619716
definition
number
: 1
pseudo
: _no_value
name
LOC619716
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:619716
definition
number
: 2
pseudo
: _no_value
clone name
MSMg01-294K02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-086H06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-354I23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-489J21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-267F17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-516P18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-304L06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-146E16
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-166L12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-510F24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-338A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-206M18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-501I19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-388A10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-182I01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-516H19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-080I09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-083G22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-046K20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-340L20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-100A12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-508F09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-466K08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-446N14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-542M07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-119N12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-522D19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-152N07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-292I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-428I02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-141G02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-537D19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-364L16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-414B17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-495M11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-406M19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-360J14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-515H18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-379J15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-231L14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-544J02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-504K18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-051D21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-533I15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-414L02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-180P15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-457F18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-503F24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-517M21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-444D08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-053I10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502M01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495N10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-117I21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-118C23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-439G03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-052J04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528L10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-336J23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-543P04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-536D01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-213K19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-354P18
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-318G14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-101J02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-097F15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-062G20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-495P23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-072O08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-185B22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-352L07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-094O05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-133G13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-157K21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-523H01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363N03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-300J16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-477G06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-424C23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-359E14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-449D24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-331N09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-105G08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-407G03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-539M12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-360O04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-473K14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-275C16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-298P20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-140A22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458O06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-110L06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-485K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-056H13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-311J07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-097N03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-097N11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-111G01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-423L04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-350P03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-062J20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-362N02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-237J23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-150M06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-155P14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-403B07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-177M06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-333H23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-512B24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-214O01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-464G22
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-510B01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-323G11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-178H10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-351O05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-402F01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-272B12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-114F18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-003C18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-132H01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-119B08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-329P18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-034C03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-103A16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-282C02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-078J11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-020G24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-260G19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-009J19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-081C04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-156K12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-166H17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-230E13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-188P05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-282N05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-284F07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-313I10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-288D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-301F23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-297G24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057L04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-167F23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-211O21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-178E11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-110K16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-128P10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-107H09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-185M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-020E04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-222N10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-060N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-052B07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-288O08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-121N19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-100C03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-141P02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-285L18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-297A04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-339B15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-336E01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-165L07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-177M05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-021A17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-040N20
singlet/doublet
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B6Ng01-100F04
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