BAC Information

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BAC

Clone NameB6Ng01-318I08
Chromosome14 (Build37)
Map Location 23,956,149 - 23,957,261
singlet/doubletsinglet
Overlap genenone
Upstream gene1700112E06Rik, EG435392, LOC665068
Downstream geneKcnma1, LOC620499, Dlg5
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318I08.bB6Ng01-318I08.g
ACCGA108388GA108389
length1,1131,148
definitionB6Ng01-318I08.b B6Ng01-318I08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcttggaaattgtcttatcgtttggcacttaacctgtgtatac
cttattgtttattttaaattgtgtctggattcctcacagagtcaataaat
atgaatgctgtataaaaggttgtcatactgtcattgcttaaacagtgaca
agagcaaggtctatacacactcagaacatatataatcatacacaatattt
ttttctggcatattttcaatttgaaatgagttgcatccataaatacagag
atacaggtcagagagaggaatatgcatctggagcccgtgcagaccctaca
ccgacttaggaacttttctcagaaagaactctggtaagggaaatccggcc
tggctggccaatgctaatactttgaggaagcttttccaagctgctaaaac
ccacatgagagatgcagtttggtctctacaagattccttggattcagttg
actgagtggcaggaaaagtttcttagtttctcagaacctgcattttcttg
tctgaattgggaaccataacaccatagggttgtggtgaaggtaaaatgca
tgtgtgtttatgaaacacttaagattattactggtgtatatgattgtaac
tggttacccagagaagatattcatatttttttctatttgtcacaacatga
ggacaatatttggaaatggtcaacatctcagaggcctttgtggttagaat
gcttctttgggaaagctggtggttctgcgtaggctttgcttgttctcaac
cccatttttgataacggttcttagatgctttaacctccatctaggcctcc
accaaccagaggtagtggaaaagaaaggttattaggatacaaagggaaag
tagacctgtgtagaaactgttctttgggagcaaatcccagccgtgtttgt
caggaaatcagtagttcagtttccaagattcagctgtggcaccttgatcc
actctcaactacctcacaaatacaccatcagtccagttcagttgttgcag
atagacctaatcacagtgtgctacgactagaagaaaacagagcaatcaag
cccaacaggaatgccagggaaacgttctcttgccaggacctctctctcat
gatgagatcagcg

gaattctttcttatgttttctatatttagaattgtctccttttgtgattt
ctttattgtttctactttgatttttagatcctgtatggttttgttcaatt
ccttcagttgtttggttgtgttttcctgtaattctttaagggatttttat
gtttcctctttaagtacttctacctgtttagctgtgttctgctgtatttt
tttaagggagttattaatgtccttcttaaaatcctctaccaacatcatga
gatatgattttaaatctgaatcttacttttccagtgtgttgggatataca
ggtctctctgtggtgggagtcatgggttctaatgatgccaagtagtcttg
gtttctattggtaagattcttacgtttgccttttgccatctggtaatcac
tggtattagatgttcttgctgtctcttgcttgagcttgtttctcctatga
gtctataagcctgtgtcagcactcctgggagaccagctctttcctggcaa
gaccagtgcacaaagggctgtgtaacagccccatctcctggctccagata
taggcccataggatcctgtcctacaagctctgttgcctgtgctctctgga
gtggacctgctttagagagacactggagggaaaatggtgatctcacctga
gtcctgtggtcagagccctccctcgaggcaagctctcctctgggagtgaa
ggttcacagaggcctgaggatcagctccacctcctggagtttcttaatcc
aggtaagttgatgaacagtttaaccatcacagcaatgcttgaaaatcaac
agccttatattcacaaataatagtcaatatgaagatggagaaactatagt
aaaaaattaagttgccaaaaataagctaacagggaaatatgcacaatgtt
tatgagtaagactttaggaagtcttttgaagacaaaaactatacttgatc
tgatgtcatccttctgactaaaatgactcaacttttctatcagtatgccg
tctgcttaacctgccattagtctgaaaagagcaatacaggttgaatgtaa
agcctaggccttgtcttatggtgaattcgaaactaatatgcagttcagga
tacaggcataaggcacagttggaatagctatgggagttcacagtatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23956149_23957261
seq2: B6Ng01-318I08.b_46_1158

seq1  GAATTCTTCTTGGAAATTGTCTTATCGTTTGGCACTTAACCTGTGTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGGAAATTGTCTTATCGTTTGGCACTTAACCTGTGTATAC  50

seq1  CTTATTGTTTATTTTAAATTGTGTCTGGATTCCTCACAGAGTCAATAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGTTTATTTTAAATTGTGTCTGGATTCCTCACAGAGTCAATAAAT  100

seq1  ATGAATGCTGTATAAAAGGTTGTCATACTGTCATTGCTTAAACAGTGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGCTGTATAAAAGGTTGTCATACTGTCATTGCTTAAACAGTGACA  150

seq1  AGAGCAAGGTCTATACACACTCAGAACATATATAATCATACACAATATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGGTCTATACACACTCAGAACATATATAATCATACACAATATTT  200

seq1  TTTTCTGGCATATTTTCAATTTGAAATGAGTTGCATCCATAAATACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGCATATTTTCAATTTGAAATGAGTTGCATCCATAAATACAGAG  250

seq1  ATACAGGTCAGAGAGAGGAATATGCATCTGGAGCCCGTGCAGACCCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGTCAGAGAGAGGAATATGCATCTGGAGCCCGTGCAGACCCTACA  300

seq1  CCGACTTAGGAACTTTTCTCAGAAAGAACTCTGGTAAGGGAAATCCGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTTAGGAACTTTTCTCAGAAAGAACTCTGGTAAGGGAAATCCGGCC  350

seq1  TGGCTGGCCAATGCTAATACTTTGAGGAAGCTTTTCCAAGCTGCTAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGCCAATGCTAATACTTTGAGGAAGCTTTTCCAAGCTGCTAAAAC  400

seq1  CCACATGAGAGATGCAGTTTGGTCTCTACAAGATTCCTTGGATTCAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGAGAGATGCAGTTTGGTCTCTACAAGATTCCTTGGATTCAGTTG  450

seq1  ACTGAGTGGCAGGAAAAGTTTCTTAGTTTCTCAGAACCTGCATTTTCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTGGCAGGAAAAGTTTCTTAGTTTCTCAGAACCTGCATTTTCTTG  500

seq1  TCTGAATTGGGAACCATAACACCATAGGGTTGTGGTGAAGGTAAAATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTGGGAACCATAACACCATAGGGTTGTGGTGAAGGTAAAATGCA  550

seq1  TGTGTGTTTATGAAACACTTAAGATTATTACTGGTGTATATGATTGTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTATGAAACACTTAAGATTATTACTGGTGTATATGATTGTAAC  600

seq1  TGGTTACCCAGAGAAGATATTCATATTTTTTTCTATTTGTCACAACATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACCCAGAGAAGATATTCATATTTTTTTCTATTTGTCACAACATGA  650

seq1  GGACAATATTTGGAAATGGTCAACATCTCAGAGGCCTTTGTGGTTAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATATTTGGAAATGGTCAACATCTCAGAGGCCTTTGTGGTTAGAAT  700

seq1  GCTTCTTTGGGAAAGCTGGTGGTTCTGCGTAGGCTTTGCTTGTTCTCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTTGGGAAAGCTGGTGGTTCTGCGTAGGCTTTGCTTGTTCTCAAC  750

seq1  CCCATTTTTGATAACGGTTCTTAGATGCTTTAACCTCCATCTAGGCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTTGATAACGGTTCTTAGATGCTTTAACCTCCATCTAGGCCTCC  800

seq1  ACCAACCAGAGGTAGTGGAAAAGAAAGGTTATTAGGATACAA--GGGAAG  848
      ||||||||||||||||||||||||||||||||||||||||||  || |||
seq2  ACCAACCAGAGGTAGTGGAAAAGAAAGGTTATTAGGATACAAAGGGAAAG  850

seq1  TAGACCTGTGTAGAAACTGTTCTTT-GGAGCAAATCCCAGCCGTG-TTGT  896
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  TAGACCTGTGTAGAAACTGTTCTTTGGGAGCAAATCCCAGCCGTGTTTGT  900

seq1  CAGGAAATCAGTAGTTCAGTTCCCAAGATTCAGCTGTGGCACCTTGATCC  946
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAGGAAATCAGTAGTTCAGTTTCCAAGATTCAGCTGTGGCACCTTGATCC  950

seq1  ACTCTCAACTACCTCACAAATACACCATCAGTCCAGTTCAGTGGTGCCAG  996
      |||||||||||||||||||||||||||||||||||||||||| ||  || 
seq2  ACTCTCAACTACCTCACAAATACACCATCAGTCCAGTTCAGTTGTTGCA-  999

seq1  GATAGACCTAAATCACCAGTGTTGGCACGACCTAGAAGAAACAGGAGCAA  1046
      ||||||||| ||||| ||||| ||  |||| ||||||||||   ||||||
seq2  GATAGACCT-AATCA-CAGTG-TGCTACGA-CTAGAAGAAAACAGAGCAA  1045

seq1  CCAAGCCCACCAAGGATG-CAAGGAGACGTTCTC-TGCCAGG-CCTCTCT  1093
       |||||||| || | ||| || ||| |||||||| ||||||| |||||||
seq2  TCAAGCCCAACAGGAATGCCAGGGAAACGTTCTCTTGCCAGGACCTCTCT  1095

seq1  C-AATGAAGTGAAGATCAGCG  1113
      |  |||| |   |||||||||
seq2  CTCATGATG---AGATCAGCG  1113


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