BAC Information

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BAC

Clone NameB6Ng01-318J20
Chromosome14 (Build37)
Map Location 23,048,841 - 23,167,306
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068, Kcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318J20.bB6Ng01-318J20.g
ACCGA108457GA108458
length1,1181,010
definitionB6Ng01-318J20.b B6Ng01-318J20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,166,293 - 23,167,306)(23,048,841 - 23,049,863)
sequence
gaattctcaaagggtacattttctgagaaagcagcatcagttttgaattc
accaaaatatgactttttcaaaagcacaaataattgaaaattcaagagct
cctattttaaaaaatatcagattaaaaacgaaatcacagaaaattcaaaa
atactgcaacatcacataaattggaatagaaaactaggggaaaaaaatcc
atagataatgtgggaaagtctgtgagttcattataaatatgaagaatgta
acaccattaaccaaggttccatgttaataagctaaaagaaatagcaaagt
aaggggaaaaggcaggaatcaatgaaatgaaagactaacaatggagaaag
ccaagggctcttaacatcagcaaagtaggtgatacatatgaccttccatg
agatgcagagttccaacataccatactgaaagcccaatcagtcaggaaaa
gggaagtttaaattagagtttgttgactctattaaaacctttacacttct
aagcattccattacaaaaaactggaagggcaatacccagactgggagaca
gactttatctgctagataaagaaactatatccataacagataagtaatga
tcacaattcaataagagaagcagtggtagatctgagtgcatccatcccac
aaaacgaaacaaagatggccaatcaaccttgcaaacatgagaaacctaga
ggggatgcttgggcatttgttaactgcaaattaaaaccaaatgaaatgca
tcatcgtcacagcaggagcgtcaatggccaaggctaagaggaaatgaaga
aggcagagctctaatggactgatggtggggactgaaatcactcattcaga
aagacaaaaccaaagcatgttcaggggaagtgagtagaaagtagaagtca
tattagtgaagtgtcaagactcagaaaggaacatgtttgcctgttttctc
acattggcaaatccctagattgtaagtcttttatattatgtgtgcaggta
ttagtcacagagctgtacagactcaataaggagcaaggagtctcagcagg
aagggagaaaaggagtcgtaggatcatgtgacatctggacacgtgaatga
gcattactgagtcgaaga
gaattcattggtttctatgggaattatgccagtatcccacgcaatgtgga
gtttggtctgtggcagagtgtgtcttcctttcttctccaaactgtgaata
tttgctagtcacttaatttgtagaccaagacgcgacttagatattctcgg
tttgcagataccctgaaagactggcagtggtggcttgttgaaattttcat
ctggtttagtttcctgagtctggaagggaagatgtttgggatagagtgtt
cataacttttttgaagaatgtagcgatagatgctgtaggtacaaaagcat
gcatagagataaataaaggtttagaaaattaagtccatctgtccttcatg
ggtcatattttcagtgatttcatccagggaagacacgatgaacaaaaccc
acagtatcttctatcctgtgcatagattagatacatgaaagatgtttatg
ggaacagagagtagtggtaccagccccatctgtacgtgcacacacccaag
gcccacccaaagcctaccgtggaagttgtttctccagagtgttgtttgtt
gtttgctgttttgttcttctctgatattgggaaagtagcagatgtatttg
aaaaactgatcccattaaatgcctaataaggtagctttttggtcaggagg
ttaatactaaggccaactaactacccattgagttaaacctccttctaaag
taaacgttgggccacccatctcagtgaccagagacttgttttgttacaag
ctttcaatttctatgtgatttaggcagttaaataaaaatgtgaatggaat
ctaaagttattttcttttatttttattttgatttaattgggtggtaaaga
tttgatgtcactttagtattggaaatctcttgttctaaaatgttgtgttt
tatcctctcccccactaaactaatcacaggttgagatccatttattaaat
tgacagagaaagggcattacacattacatgagaatgaacatacatgtatt
aaagactaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23166293_23167306
seq2: B6Ng01-318J20.b_152_1162 (reverse)

seq1  TCTTCTACTCAGTATATCCTCATTTCACGTGCTCAGATGTCACATGGATC  50
      ||||| |||||||| || |||| ||||||||  |||||||||||| ||||
seq2  TCTTCGACTCAGTA-ATGCTCA-TTCACGTGTCCAGATGTCACAT-GATC  47

seq1  CTACGGCTCCCTTTTCTCCCTCCCCTGCTGAAGAACTCCTTTGCT-CTTA  99
      ||||| || ||||||||||||  ||||||||   ||||| ||||| ||||
seq2  CTACGACT-CCTTTTCTCCCT-TCCTGCTGA--GACTCC-TTGCTCCTTA  92

seq1  -TGGGTCTTGTTCCAGTTCTGTGACTAATACCTGCACACAT-ATAT-AAA  146
       || ||||   | ||| |||||||||||||||||||||||| |||| |||
seq2  TTGAGTCT--GTACAGCTCTGTGACTAATACCTGCACACATAATATAAAA  140

seq1  GAC-TACAATCTA-GGATTTGCCAATGTGAGAAAACAGGC-AACATGTTC  193
      ||| ||||||||| |||||||||||||||||||||||||| |||||||||
seq2  GACTTACAATCTAGGGATTTGCCAATGTGAGAAAACAGGCAAACATGTTC  190

seq1  CTTTCTGAGTCTTGACACTTCACCTAATATGACTTCTAC-TTCTACTCAC  242
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  CTTTCTGAGTCTTGACACTTCA-CTAATATGACTTCTACTTTCTACTCAC  239

seq1  TTCCCCTGAACATGCTTTGGTTTTGTCTTTCTGAATGAGTGATTTCAGTC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGAACATGCTTTGGTTTTGTCTTTCTGAATGAGTGATTTCAGTC  289

seq1  CCCACCATCAGTCCATTAGAGCTCTGCCTTCTTCATTTCCTCTTAGCCTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATCAGTCCATTAGAGCTCTGCCTTCTTCATTTCCTCTTAGCCTT  339

seq1  GGCCATTGACGCTCCTGCTGTGACGATGATGCATTTCATTTGGTTTTAAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTGACGCTCCTGCTGTGACGATGATGCATTTCATTTGGTTTTAAT  389

seq1  TTGCAGTTAACAAATGCCCAAGCATCCCCTCTAGGTTTCTCATGTTTGCA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTAACAAATGCCCAAGCATCCCCTCTAGGTTTCTCATGTTTGCA  439

seq1  AGGTTGATTGGCCATCTTTGTTTCGTTTTGTGGGATGGATGCACTCAGAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGATTGGCCATCTTTGTTTCGTTTTGTGGGATGGATGCACTCAGAT  489

seq1  CTACCACTGCTTCTCTTATTGAATTGTGATCATTACTTATCTGTTATGGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACTGCTTCTCTTATTGAATTGTGATCATTACTTATCTGTTATGGA  539

seq1  TATAGTTTCTTTATCTAGCAGATAAAGTCTGTCTCCCAGTCTGGGTATTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTCTTTATCTAGCAGATAAAGTCTGTCTCCCAGTCTGGGTATTG  589

seq1  CCCTTCCAGTTTTTTGTAATGGAATGCTTAGAAGTGTAAAGGTTTTAATA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCAGTTTTTTGTAATGGAATGCTTAGAAGTGTAAAGGTTTTAATA  639

seq1  GAGTCAACAAACTCTAATTTAAACTTCCCTTTTCCTGACTGATTGGGCTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAACAAACTCTAATTTAAACTTCCCTTTTCCTGACTGATTGGGCTT  689

seq1  TCAGTATGGTATGTTGGAACTCTGCATCTCATGGAAGGTCATATGTATCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATGGTATGTTGGAACTCTGCATCTCATGGAAGGTCATATGTATCA  739

seq1  CCTACTTTGCTGATGTTAAGAGCCCTTGGCTTTCTCCATTGTTAGTCTTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTTGCTGATGTTAAGAGCCCTTGGCTTTCTCCATTGTTAGTCTTT  789

seq1  CATTTCATTGATTCCTGCCTTTTCCCCTTACTTTGCTATTTCTTTTAGCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATTGATTCCTGCCTTTTCCCCTTACTTTGCTATTTCTTTTAGCT  839

seq1  TATTAACATGGAACCTTGGTTAATGGTGTTACATTCTTCATATTTATAAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACATGGAACCTTGGTTAATGGTGTTACATTCTTCATATTTATAAT  889

seq1  GAACTCACAGACTTTCCCACATTATCTATGGATTTTTTTCCCCTAGTTTT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACAGACTTTCCCACATTATCTATGGATTTTTTTCCCCTAGTTTT  939

seq1  CTATTCCAATTTATGTGATGTTGCAGTATTTTTGAATTTTCTGTGATTTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCAATTTATGTGATGTTGCAGTATTTTTGAATTTTCTGTGATTTC  989

seq1  GTTTTTAATCTGATATTTTTTA  1014
      ||||||||||||||||||||||
seq2  GTTTTTAATCTGATATTTTTTA  1011

seq1: chr14_23048841_23049863
seq2: B6Ng01-318J20.g_67_1076

seq1  GAATTCATTGGTTTCTATGGGAATTATGCCAGTATCCCACGCAATGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGTTTCTATGGGAATTATGCCAGTATCCCACGCAATGTGGA  50

seq1  GTTTGGTCTGTGGCAGAGTGTGTCTTCCTTTCTTCTCCAAACTGTGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCTGTGGCAGAGTGTGTCTTCCTTTCTTCTCCAAACTGTGAATA  100

seq1  TTTGCTAGTCACTTAATTTGTAGACCAAGACGCGACTTAGATATTCTCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAGTCACTTAATTTGTAGACCAAGACGCGACTTAGATATTCTCGG  150

seq1  TTTGCAGATACCCTGAAAGACTGGCAGTGGTGGCTTGTTGAAATTTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGATACCCTGAAAGACTGGCAGTGGTGGCTTGTTGAAATTTTCAT  200

seq1  CTGGTTTAGTTTCCTGAGTCTGGAAGGGAAGATGTTTGGGATAGAGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTAGTTTCCTGAGTCTGGAAGGGAAGATGTTTGGGATAGAGTGTT  250

seq1  CATAACTTTTTTGAAGAATGTAGCGATAGATGCTGTAGGTACAAAAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTTTTTTGAAGAATGTAGCGATAGATGCTGTAGGTACAAAAGCAT  300

seq1  GCATAGAGATAAATAAAGGTTTAGAAAATTAAGTCCATCTGTCCTTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGAGATAAATAAAGGTTTAGAAAATTAAGTCCATCTGTCCTTCATG  350

seq1  GGTCATATTTTCAGTGATTTCATCCAGGGAAGACACGATGAACAAAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATATTTTCAGTGATTTCATCCAGGGAAGACACGATGAACAAAACCC  400

seq1  ACAGTATCTTCTATCCTGTGCATAGATTAGATACATGAAAGATGTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATCTTCTATCCTGTGCATAGATTAGATACATGAAAGATGTTTATG  450

seq1  GGAACAGAGAGTAGTGGTACCAGCCCCATCTGTACGTGCACACACCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGAGAGTAGTGGTACCAGCCCCATCTGTACGTGCACACACCCAAG  500

seq1  GCCCACCCAAAGCCTACCGTGGAAGTTGTTTCTCCAGAGTGTTGTTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCCAAAGCCTACCGTGGAAGTTGTTTCTCCAGAGTGTTGTTTGTT  550

seq1  GTTTGCTGTTTTGTTCTTCTCTGATATTGGGAAAGTAGCAGATGTATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTGTTTTGTTCTTCTCTGATATTGGGAAAGTAGCAGATGTATTTG  600

seq1  AAAAACTGATCCCATTAAATGCCTAATAAGGTAGCTTTTTGGTCAGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGATCCCATTAAATGCCTAATAAGGTAGCTTTTTGGTCAGGAGG  650

seq1  TTAATACTAAGGCCAACTAACTACCCATTGAGTTAAACCTCCTTCTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTAAGGCCAACTAACTACCCATTGAGTTAAACCTCCTTCTAAAG  700

seq1  TAAACGTTGGGCCACCCATCTCAGTGACCAGAGACTTGTTTTGTTACAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGTTGGGCCACCCATCTCAGTGACCAGAGACTTGTTTTGTTACAAG  750

seq1  CTTTCAATTTCTATGTGATTTAGGCAGTTAAATAAAAATGTGAATGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATTTCTATGTGATTTAGGCAGTTAAATAAAAATGTGAATGGAAT  800

seq1  CTAAAGTTATTTTCTTTTATTTTTATTTTGATTTAATTGGGTGGTAAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTTATTTTCTTTTATTTTTATTTTGATTTAATTGGGTGGTAAAGA  850

seq1  TTTGATGTCACTTAAGTA-TGGAAATCTC-TGTTCTAAAATGTAGTG-TT  897
      ||||||||||||| |||| |||||||||| ||||||||||||| ||| ||
seq2  TTTGATGTCACTTTAGTATTGGAAATCTCTTGTTCTAAAATGTTGTGTTT  900

seq1  TAT-CTCT-CCCCACTAAACT-ATCACAGG-TGAGATCCATTTAT--AAA  941
      ||| |||| |||||||||||| |||||||| ||||||||||||||  || 
seq2  TATCCTCTCCCCCACTAAACTAATCACAGGTTGAGATCCATTTATTAAAT  950

seq1  TGACAGAGAA--GGCATTACACA-TACATGAG-ATGAACATACATGTA-T  986
      ||||||||||  ||||||||||| |||||||| ||||||||||||||| |
seq2  TGACAGAGAAAGGGCATTACACATTACATGAGAATGAACATACATGTATT  1000

seq1  AAAGACTACACATGTATATACATGTATAAAGACTACA  1023
      ||||||||||                           
seq2  AAAGACTACA---------------------------  1010