BAC Information

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BAC

Clone NameB6Ng01-318N10
Chromosome14 (Build37)
Map Location 115,041,145 - 115,042,240
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
Downstream geneGpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318N10.bB6Ng01-318N10.g
ACCGA108625GA108626
length1,0981,123
definitionB6Ng01-318N10.b B6Ng01-318N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttatattagtatgaagaacataaaacaatagacaaatgtgt
cctctaatggaagagttttgaaattctaatgatgcatcatcactagtcaa
ttcattgtctagaaaataatgaaaattaactttacaattacaacacagat
tctcttaaaaattttcatgtataccacaagctttgagatgccacttggac
aataggatttgcatacatttattattgtttgttgcactcaaaaatctaaa
agaattagtgcagagttttgggaatcctaccaagaaaactaagcgctttt
tttttttgtcgttgtaaacattcatgtgttaaggaaacagaaatacaagg
aagactatacaatatgaagtttatcataatagctgttcacaggcaatttg
ggcatttgtggaacatgatgctgaaatctgcttttgcttgtaggattagg
tctgaagctggaagaaaagacatctggaggggaatgatgagtgtgaagtg
gggaaagcaatagcagtctggaacctccctgtttctcatcgcctgcatgc
ctgctgtgctttggggataagctgatgttctcaagtgtgatgttggatga
tcatgaggaccagttgctgaagaagctgaaagaggaaatcagcagctaga
ggtgattggatctatctgtgccggcaaaaagataaactagagattagtag
ttgcacacacaagctgaggcagcttaggaactcacactcatgagaatgaa
gatcgatgctgctcccttgatcccccatccttcagatgtcagtcctgccc
agtttcccttggaagtctccatggaagcagaaagcctcactttgtttagt
tttcttgtttgtttttatgtaagtatgttgtaaattatgtactttggctg
gtcaaagttttagtaagttgtgacaagttaacccatgggttttcaataag
ctgctagcagtgacagagtgtcatatttgtactttaatgctaatagtatg
cgatgcttttttggttggttgtttttgttttgtttgttgtttgcttgttc
tgagacaaggtgtctctgtataggcctgcctgttctggaacttcactt
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctactaatgcctcaaatgagtattc
agccggtgccggtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaagggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaatggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaaagggatattatgcagcatttgggccttattttgtccaat
gaaaacgccccatcgggagggtattcagctaaagcaaaaaatatcatggc
aaagatgggttataaagaaaggaaaagggttaggacatcaagaacaggga
aggatagagcccatctcacctaatggaacccagacagacagggtctgggt
tttccatagcggcattggggcagcacggccataccatggaaaacagggac
cagtgtgggtctcatggcaactatctctgaaaactagagctgtgatcacc
tgatagagaccataaaacctagtcatattgagctctaccttactgatact
ccaacttttgtgtaaatttagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_115041145_115042240
seq2: B6Ng01-318N10.b_49_1146 (reverse)

seq1  AAGTG-AGTTCCAGGACAGCCAGGGCTATACAGAGACACCCTGTCTCAGA  49
      ||||| |||||||| |||| |||| ||||||||||||||| |||||||| 
seq2  AAGTGAAGTTCCAGAACAGGCAGGCCTATACAGAGACACCTTGTCTCAG-  49

seq1  AAACAAGCAAACAAACAAACAAAACAAAAACAAACAAACAAAAAAGCATC  99
       ||||||||||| |||||||||||||||||||| ||| ||||||||||||
seq2  -AACAAGCAAAC-AACAAACAAAACAAAAACAACCAACCAAAAAAGCATC  97

seq1  GCATACTATTAGCATT-AAGTAC-AATATGACACTCTGTCACTGCTAGCA  147
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  GCATACTATTAGCATTAAAGTACAAATATGACACTCTGTCACTGCTAGCA  147

seq1  GC-TATTGAAAA-CCATGGGTTAACTTGTCACAACTTACTAAAACTTTGA  195
      || ||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCTTATTGAAAACCCATGGGTTAACTTGTCACAACTTACTAAAACTTTGA  197

seq1  CCAGCCAAAGTACATAATTTACAACATACTTACATAAAAACAAACAAGAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAAAGTACATAATTTACAACATACTTACATAAAAACAAACAAGAA  247

seq1  AACTAAACAAAGTGAGGCTTTCTGCTTCCATGGAGACTTCCAAGGGAAAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAACAAAGTGAGGCTTTCTGCTTCCATGGAGACTTCCAAGGGAAAC  297

seq1  TGGGCAGGACTGACATCTGAAGGATGGGGGATCAAGGGAGCAGCATCGAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGGACTGACATCTGAAGGATGGGGGATCAAGGGAGCAGCATCGAT  347

seq1  CTTCATTCTCATGAGTGTGAGTTCCTAAGCTGCCTCAGCTTGTGTGTGCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTCTCATGAGTGTGAGTTCCTAAGCTGCCTCAGCTTGTGTGTGCA  397

seq1  ACTACTAATCTCTAGTTTATCTTTTTGCCGGCACAGATAGATCCAATCAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAATCTCTAGTTTATCTTTTTGCCGGCACAGATAGATCCAATCAC  447

seq1  CTCTAGCTGCTGATTTCCTCTTTCAGCTTCTTCAGCAACTGGTCCTCATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCTGCTGATTTCCTCTTTCAGCTTCTTCAGCAACTGGTCCTCATG  497

seq1  ATCATCCAACATCACACTTGAGAACATCAGCTTATCCCCAAAGCACAGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCAACATCACACTTGAGAACATCAGCTTATCCCCAAAGCACAGCA  547

seq1  GGCATGCAGGCGATGAGAAACAGGGAGGTTCCAGACTGCTATTGCTTTCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCAGGCGATGAGAAACAGGGAGGTTCCAGACTGCTATTGCTTTCC  597

seq1  CCACTTCACACTCATCATTCCCCTCCAGATGTCTTTTCTTCCAGCTTCAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCACACTCATCATTCCCCTCCAGATGTCTTTTCTTCCAGCTTCAG  647

seq1  ACCTAATCCTACAAGCAAAAGCAGATTTCAGCATCATGTTCCACAAATGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATCCTACAAGCAAAAGCAGATTTCAGCATCATGTTCCACAAATGC  697

seq1  CCAAATTGCCTGTGAACAGCTATTATGATAAACTTCATATTGTATAGTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTGCCTGTGAACAGCTATTATGATAAACTTCATATTGTATAGTCT  747

seq1  TCCTTGTATTTCTGTTTCCTTAACACATGAATGTTTACAACGACAAAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTATTTCTGTTTCCTTAACACATGAATGTTTACAACGACAAAAAA  797

seq1  AAAAAGCGCTTAGTTTTCTTGGTAGGATTCCCAAAACTCTGCACTAATTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCGCTTAGTTTTCTTGGTAGGATTCCCAAAACTCTGCACTAATTC  847

seq1  TTTTAGATTTTTGAGTGCAACAAACAATAATAAATGTATGCAAATCCTAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATTTTTGAGTGCAACAAACAATAATAAATGTATGCAAATCCTAT  897

seq1  TGTCCAAGTGGCATCTCAAAGCTTGTGGTATACATGAAAATTTTTAAGAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAGTGGCATCTCAAAGCTTGTGGTATACATGAAAATTTTTAAGAG  947

seq1  AATCTGTGTTGTAATTGTAAAGTTAATTTTCATTATTTTCTAGACAATGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTGTTGTAATTGTAAAGTTAATTTTCATTATTTTCTAGACAATGA  997

seq1  ATTGACTAGTGATGATGCATCATTAGAATTTCAAAACTCTTCCATTAGAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTAGTGATGATGCATCATTAGAATTTCAAAACTCTTCCATTAGAG  1047

seq1  GACACATTTGTCTATTGTTTTATGTTCTTCATACTAATATAAATGGAATT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATTTGTCTATTGTTTTATGTTCTTCATACTAATATAAATGGAATT  1097

seq1  C  1096
      |
seq2  C  1098