BAC Information

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BAC

Clone NameB6Ng01-319C03
Chromosome14 (Build37)
Map Location 28,221,390 - 28,222,519
singlet/doubletsinglet
Overlap genenone
Upstream geneSlmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147
Downstream geneCcdc66, LOC665370, Erc2, LOC100040206
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319C03.bB6Ng01-319C03.g
ACCGA108843GA108844
length1,1151,176
definitionB6Ng01-319C03.b B6Ng01-319C03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggagactaaaaagtatctacttgtgtgaggtttgcattgtta
tgacaaaatgccagagaggaacaatttaagaagaaatttgactcatggct
ttcagtcttggtcatttacccccattctttggtacctgagacaagcttgg
caggccatcacagtgcaagtaaacaggaaagtggcgctgcacatcttgtg
gcagccagaaaagggagacaggaagaaccaaggaacacaatacagccttc
aaaggcggccactcccagtgacctgctggtgtccccaggccctgacagca
gatagatagactccacatctgtagagactgaatttgtgatataggtgcca
aagggaagacttcggaggaagacaagtaagagggtatgaaactgccatta
ctctgtgactaacttacctaaaaggttcagaatctaagccaggggtagta
gcagaagcctgggatcatgaaacacttgggaggtgaaagtaggagaactg
tgagttcaaggccaacctgaactatatttcaagtaccaggtaagcgaagg
ctacatagacctgcctcgagaggttggcgaggtagctcagcggaaaagag
cattagctgctctttcgaggacccagactctattccagcgcccacatggt
agctaatgaacgtctagagctccaggtcgaggggatcagattctcctttc
tggccttgtccaggcacacacctggtatgtagacatatgcagtaaaacat
ctatatgcagattttttttttttttaatttttaaagaaaaggaacctgtc
tcaagaaaaacaaagcattcatcaccggagagagcaagctaagagcactt
gctgagtttgctgtgcgatcatgaggagtcaggttcagagccagtgccac
ataataagtcaggagcttataactccagctcacaacatcccgtatcccct
atggctctgtgcactcataggagcacgcactgcacatatcacacagacac
atgcatacacatattttcttttcaattctgatcttatgacccaatcatga
gaatagaccatgctcatcgaacgtcgaagctcatctctgacagtactggc
actgtactaaatctt
gaattccttgagggcaggagcaaaggacctggatttcttgtaaatggtga
tgatctactattccaggataaactataagtccttacatagtcagcgatcc
tcgccctattatcaggcccactgttcctgaaggtaagggttccggggcct
caactggaataggctgaacattcatttgtggcatgagtaggaagtcggtg
gtggaatgcaggtccactgatgcgattccttggggttcatttcctctaag
ttgctctggcttttgataaaccgattcccatatttgtgagggctctggga
tcgggggcccacaaccccgttttttggtaggcggttgtcagattcattga
ttgggggcaggagcctccccttcatatcgcgaattgagcagcattcacta
gctttgtgataacccttcccacaacgagagcaaagagtagccacccgggc
ccgctctgggagggagcagtttttctttaggtggcctatctttccacagt
taaaacaagctctttgtttgctggtagaggggcgcttttgtgattgtaat
atggctgcagccagtcctgcattagtaagtggacctcctagctctctaca
taccctaagccaatcttgcaatcccttgttttttcttggcgtgattgcat
tcctgcattcctgcattcctgtgtggcctgctcataaatgagctgttcaa
ttaacggcatggcctgttcagggtctccaaaaactcttcctgtggcctct
gtcattctcactacaaagtctgagaacggctcctgggggccctggataat
ctttgtaaaggtggcctccagcttctccctttcttgtaagagctttccaa
gccttaatggcagccgctgatatttgagcatatgctccccaatgataatt
agtctgattggcagcatactgtccttgggcctgttataattcaaaagtct
attgcctctgatatcatcttctgccacagcattaattcttgcctgatctg
ggcagcatcgtacacatgcttttccatttcatgtattgtccatattaggt
agagtgactacctgtcaattggccagccttgccagagttcaatggctaca
tggcattctctcaactgcactaggtgtagttgccattgacctcattatat
acgcgcacgagatgttcatcgacgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28221390_28222519
seq2: B6Ng01-319C03.b_45_1159

seq1  GAATTCTGGGAGACTAAAAAGTATCTACTTGTGTGAGGTTTGCATTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAGACTAAAAAGTATCTACTTGTGTGAGGTTTGCATTGTTA  50

seq1  TGACAAAATGCCAGAGAGGAACAATTTAAGAAGAAATTTGACTCATGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAATGCCAGAGAGGAACAATTTAAGAAGAAATTTGACTCATGGCT  100

seq1  TTCAGTCTTGGTCATTTACCCCCATTCTTTGGTACCTGAGACAAGCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTTGGTCATTTACCCCCATTCTTTGGTACCTGAGACAAGCTTGG  150

seq1  CAGGCCATCACAGTGCAAGTAAACAGGAAAGTGGCGCTGCACATCTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCATCACAGTGCAAGTAAACAGGAAAGTGGCGCTGCACATCTTGTG  200

seq1  GCAGCCAGAAAAGGGAGACAGGAAGAACCAAGGAACACAATACAGCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGAAAAGGGAGACAGGAAGAACCAAGGAACACAATACAGCCTTC  250

seq1  AAAGGCGGCCACTCCCAGTGACCTGCTGGTGTCCCCAGGCCCTGACAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCGGCCACTCCCAGTGACCTGCTGGTGTCCCCAGGCCCTGACAGCA  300

seq1  GATAGATAGACTCCACATCTGTAGAGACTGAATTTGTGATATAGGTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGACTCCACATCTGTAGAGACTGAATTTGTGATATAGGTGCCA  350

seq1  AAGGGAAGACTTCGGAGGAAGACAAGTAAGAGGGTATGAAACTGCCATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGACTTCGGAGGAAGACAAGTAAGAGGGTATGAAACTGCCATTA  400

seq1  CTCTGTGACTAACTTACCTAAAAGGTTCAGAATCTAAGCCAGGGGTAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGACTAACTTACCTAAAAGGTTCAGAATCTAAGCCAGGGGTAGTA  450

seq1  GCAGAAGCCTGGGATCATGAAACACTTGGGAGGTGAAAGTAGGAGAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGCCTGGGATCATGAAACACTTGGGAGGTGAAAGTAGGAGAACTG  500

seq1  TGAGTTCAAGGCCAACCTGAACTATATTTCAAGTACCAGGTAAGCGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAAGGCCAACCTGAACTATATTTCAAGTACCAGGTAAGCGAAGG  550

seq1  CTACATAGACCTGCCTCGAGAGGTTGGCGAGGTAGCTCAGCGGAAAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGACCTGCCTCGAGAGGTTGGCGAGGTAGCTCAGCGGAAAAGAG  600

seq1  CATTAGCTGCTCTTTCGAGGACCCAGACTCTATTCCAGCGCCCACATGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCTGCTCTTTCGAGGACCCAGACTCTATTCCAGCGCCCACATGGT  650

seq1  AGCTAATGAACGTCTAGAGCTCCAGGTCGAGGGGATCAGATTCTCCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATGAACGTCTAGAGCTCCAGGTCGAGGGGATCAGATTCTCCTTTC  700

seq1  TGGCCTTGTCCAGGCACACACCTGGTATGTAGACATATGCAGTAAAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTGTCCAGGCACACACCTGGTATGTAGACATATGCAGTAAAACAT  750

seq1  CTATATGCAGATTTTTTTTTTTTTTAATTTTTAAAGAAAAGGAACCTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGCAGATTTTTTTTTTTTTTAATTTTTAAAGAAAAGGAACCTGTC  800

seq1  TCAAGAAAAACAAAGCATTCATCACCGGAGAGAGCAAGCTAAGAGCACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAAAACAAAGCATTCATCACCGGAGAGAGCAAGCTAAGAGCACTT  850

seq1  GCTGAGTTTGCTGTGCGATCATGAGGAGTCAGGTTCAGAGCCAGTGCCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTTGCTGTGCGATCATGAGGAGTCAGGTTCAGAGCCAGTGCCAC  900

seq1  ATAATAAGTCAGGAGCTTATAACTCCAGCTCACAACAATCCGGTATCCCC  950
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  ATAATAAGTCAGGAGCTTATAACTCCAGCTCACAAC-ATCCCGTATCCCC  949

seq1  TTATGGCCTCTGTGCACTCATAGGAGCACGCACCTGCACATATCCACACA  1000
       ||||| ||||||||||||||||||||||||| |||||||||| ||||||
seq2  -TATGG-CTCTGTGCACTCATAGGAGCACGCA-CTGCACATAT-CACACA  995

seq1  GACACATGCATACACATATTTTCTTTTCAAATTCTGAATCTTATGAACCC  1050
      |||||||||||||||||||||||||||| ||||||| |||||||| ||||
seq2  GACACATGCATACACATATTTTCTTTTC-AATTCTG-ATCTTATG-ACCC  1042

seq1  ATTCATGAGATTAGACCCTTGCCTCATCGAACGTCCCAAAACCTCATCTC  1100
      | |||||||| |||||| |   |||||||||||||    || ||||||||
seq2  AATCATGAGAATAGACCAT--GCTCATCGAACGTC---GAAGCTCATCTC  1087

seq1  TGAACAGTACT-GCACTGTAAACTAAATCTT  1130
      || |||||||| |||||||  ||||||||||
seq2  TG-ACAGTACTGGCACTGT--ACTAAATCTT  1115