BAC Information

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BAC

Clone NameB6Ng01-320N14
Chromosome14 (Build37)
Map Location 124,018,498 - 124,019,632
singlet/doubletsinglet
Overlap geneVgcnl1
Upstream genePcca, BC006662, 4930594M22Rik, Tmtc4
Downstream geneItgbl1, LOC668700, Fgf14, GA_x5J8B7W4W3R-189177-188236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320N14.bB6Ng01-320N14.g
ACCGA110112GA110113
length1,1791,138
definitionB6Ng01-320N14.b B6Ng01-320N14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgctcctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgtcgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactgctcgtttggttaattctttga
atagttcttcttgtttctacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaggg
cttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttcttc
tggagcactcagtgctatgagtttccctctagaaatgctttcatgtgtcc
catagtttggtacgtgtggcttcatttcataacatctaaaacgtcttata
cttcttattcttccttgaaccaagtatcatggaaagcgttaatcagcttc
cacaggaatgtgccttcgtatttaggtgattggaaatcagctagccatgt
gactcgatgatacacggaatattttcata
gaattccataatttggctgtgggtaattctagttttatcctgctaaagag
tctccatgctgtttcacaatcacttgataatttttcattcccacagttga
aaatgaaagtggttgctccctctcctatccttgctagcatttattgtttt
atttctgaattatcactattgcctgttattagatggaatcacagtgtggt
tttaattttcattttttgatagctaaggatgtagagtaagtaaatattga
caatatgtatttgataatttgagaactatctctgtatttcattaatgtat
ttattgatgcagtgtttgagtttttgctgtttatgtttttactcttgaat
tctttgtatgttctaaatactaatcctctgtcatatgtgtaataataatc
tatacttatcattagcaagtgttagaatgctggaaataaggctggtattg
gagaaactagatgacctatctattggtggtaatgggaatagaggaggatg
acagttttaccagtaggaacaaaatgctaatagatttggtaaaaaaaaaa
gattaaaatggaaaaatgggtggaacacaagttgtatttctgagattata
gaattctgaacaattttattattattttgtcatgactacagaaaactaat
tttcaaagtacaagctaaattattttatttgttttctttttaactgctat
tattatgaaacccacatatgatttctggagtagaagaaatattttaataa
aataattacttaatactttctaattaaatgtactgcagtatattctgatc
atggttccactcccccaactttttccagatactccccaccttcctaccca
accaatgacatgctcttttcttttatctccctagaaaaacaaatgccttt
ctaaaagtataaattatagaagtattttcacaccctaagatacacattta
tattagcaaagataaggtctttcatgtttttatagccaggagacttaata
aaacttttattgacgttgaaactaaacaatatgaaacggaagcagatagg
tatcttctgagcatgaaaccatgccatgttttatcatctttcatgggcta
aagtacagctactagatgttaaagacttagaattataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_124018498_124019632
seq2: B6Ng01-320N14.g_66_1203 (reverse)

seq1  TTATTATTCTTTAGTCTTATACATCTTAGTAGCTGTACTTTAGCCCATGA  50
      |||| |||| | ||||||  ||||| ||||||||||||||||||||||||
seq2  TTATAATTC-TAAGTCTTTAACATC-TAGTAGCTGTACTTTAGCCCATGA  48

seq1  AAAGAATGATTAAAAACATTTCCATGTTTCATGCTCAGAAGGTTCCTATC  100
      ||   |||||  |||||||  |   |||||||||||||||| | ||||||
seq2  AA--GATGAT--AAAACATGGCATGGTTTCATGCTCAGAAGATACCTATC  94

seq1  TGCTTCCGTTTCATATTGTTTAGTTTTCAAACGTCAAT-AAAGTTTTA-T  148
      ||||||||||||||||||||||||||   ||||||||| ||||||||| |
seq2  TGCTTCCGTTTCATATTGTTTAGTTT--CAACGTCAATAAAAGTTTTATT  142

seq1  AAGTCTCCTGGCTAT-AAAACATGAAAGA-CTTATC-TTGCTAATATAAA  195
      ||||||||||||||| ||||||||||||| |||||| |||||||||||||
seq2  AAGTCTCCTGGCTATAAAAACATGAAAGACCTTATCTTTGCTAATATAAA  192

seq1  TGTGTATCTTA-GGTGTG-AAATACTTCTATAATTTATACTTTTAG-AAG  242
      ||||||||||| |||||| ||||||||||||||||||||||||||| |||
seq2  TGTGTATCTTAGGGTGTGAAAATACTTCTATAATTTATACTTTTAGAAAG  242

seq1  GCATTTG-TTTTCTAGGGAGATAAA--GAAAGAGCATGTCATTGGTTGGG  289
      ||||||| |||||||||||||||||   ||||||||||||||||||||||
seq2  GCATTTGTTTTTCTAGGGAGATAAAAGAAAAGAGCATGTCATTGGTTGGG  292

seq1  TAGGAAGGTGGGGAGTATCTGGAAAAAGTTGGGGGAGTGGAACCATGATC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGGTGGGGAGTATCTGGAAAAAGTTGGGGGAGTGGAACCATGATC  342

seq1  AGAATATACTGCAGTACATTTAATTAGAAAGTATTAAGTAATTATTTTAT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATACTGCAGTACATTTAATTAGAAAGTATTAAGTAATTATTTTAT  392

seq1  TAAAATATTTCTTCTACTCCAGAAATCATATGTGGGTTTCATAATAATAG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTCTTCTACTCCAGAAATCATATGTGGGTTTCATAATAATAG  442

seq1  CAGTTAAAAAGAAAACAAATAAAATAATTTAGCTTGTACTTTGAAAATTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAAAAGAAAACAAATAAAATAATTTAGCTTGTACTTTGAAAATTA  492

seq1  GTTTTCTGTAGTCATGACAAAATAATAATAAAATTGTTCAGAATTCTATA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGTAGTCATGACAAAATAATAATAAAATTGTTCAGAATTCTATA  542

seq1  ATCTCAGAAATACAACTTGTGTTCCACCCATTTTTCCATTTTAATCTTTT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGAAATACAACTTGTGTTCCACCCATTTTTCCATTTTAATCTTTT  592

seq1  TTTTTTACCAAATCTATTAGCATTTTGTTCCTACTGGTAAAACTGTCATC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACCAAATCTATTAGCATTTTGTTCCTACTGGTAAAACTGTCATC  642

seq1  CTCCTCTATTCCCATTACCACCAATAGATAGGTCATCTAGTTTCTCCAAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTATTCCCATTACCACCAATAGATAGGTCATCTAGTTTCTCCAAT  692

seq1  ACCAGCCTTATTTCCAGCATTCTAACACTTGCTAATGATAAGTATAGATT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCTTATTTCCAGCATTCTAACACTTGCTAATGATAAGTATAGATT  742

seq1  ATTATTACACATATGACAGAGGATTAGTATTTAGAACATACAAAGAATTC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTACACATATGACAGAGGATTAGTATTTAGAACATACAAAGAATTC  792

seq1  AAGAGTAAAAACATAAACAGCAAAAACTCAAACACTGCATCAATAAATAC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAAAAACATAAACAGCAAAAACTCAAACACTGCATCAATAAATAC  842

seq1  ATTAATGAAATACAGAGATAGTTCTCAAATTATCAAATACATATTGTCAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGAAATACAGAGATAGTTCTCAAATTATCAAATACATATTGTCAA  892

seq1  TATTTACTTACTCTACATCCTTAGCTATCAAAAAATGAAAATTAAAACCA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTTACTCTACATCCTTAGCTATCAAAAAATGAAAATTAAAACCA  942

seq1  CACTGTGATTCCATCTAATAACAGGCAATAGTGATAATTCAGAAATAAAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGATTCCATCTAATAACAGGCAATAGTGATAATTCAGAAATAAAA  992

seq1  CAATAAATGCTAGCAAGGATAGGAGAGGGAGCAACCACTTTCATTTTCAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGCTAGCAAGGATAGGAGAGGGAGCAACCACTTTCATTTTCAA  1042

seq1  CTGTGGGAATGAAAAATTATCAAGTGATTGTGAAACAGCATGGAGACTCT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGAATGAAAAATTATCAAGTGATTGTGAAACAGCATGGAGACTCT  1092

seq1  TTAGCAGGATAAAACTAGAATTACCCACAGCCAAATTATGGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGATAAAACTAGAATTACCCACAGCCAAATTATGGAATTC  1138