BAC Information

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BAC

Clone NameB6Ng01-321A05
Chromosome14 (Build37)
Map Location 53,891,411 - 53,892,543
singlet/doubletsinglet
Overlap geneLOC100042601
Upstream geneRab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424
Downstream geneLOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765, EG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049, LOC100043325, A730076H11Rik, LOC627777, A630038E17Rik, EG626545, Dad1, Abhd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321A05.bB6Ng01-321A05.g
ACCGA110236GA110237
length1,155977
definitionB6Ng01-321A05.b B6Ng01-321A05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctgcactggagcttggtcttttactccatatgcatatgtaa
gtgtgtgtgtgtgtaaatatgtagttatgaggtaagtatgtagcagggcc
caactggaatgcatgaagacacatgagtttgtatatggtagtatgtgagt
ttatgcatatttgcttgtgtaaaagtttttccttaagtgactctcttctc
ctggttcagtaaaagtttattgctccaaacctcctcctgcctgacaaggg
agaagccaggcttctgggcaagagagaaaaaggttctagcaattaatcct
ttacttaatcctctgctgttaggctactggcgttaatcatccaagccagc
agtttttaactcattcttgctcagaacgaacaggaaagattttaggatat
tttctagaagttatcagcaagtataaagtatagtcagagagctagaaggc
cagagactatcggtctttaaatctacctctatgtccagctctgtgtcctg
tttcagcccattccagcctgggcagtcttctggcaatagttatttccttt
ctctaaagaaataataacttcagtctcttacactgtgttgaaatggtctt
ctttcctcagcacaaaaatcacacaggaacagctcctaatgtgtgggttc
ctatttttctttttttctttttgagaacagagcaaggtagctgggtatct
cagtaatggtgacaacactggttgtatctgacctaagagaatggagaaaa
agatgctaactataaacacacattacccaaggaacaacagatctaaaaac
catcaactcacctgttaacagtgttgaatgcctcaactaggctcttctgt
agtcctgtgctgttaagtataaggagcctgagggaaagcttagcccagaa
gcacacaggccatgtttccccacaaggacctctgtccctggtaactgtcc
catcaaatcccacgtgctggggctctgcacttcctgtaaatccaaccact
tgtgagactttggctgatcttacattttccttccctgaagataccatgcc
tctagctaatccaaatatggaaagtaaatattttaaaacgtatttatatt
cttaattcttcattttttaaaattaattccaacatggaacttctggaaga
atgag
gaattccaggacaggcgaacaggaatgagggaggggaaacaccatcatag
aagcaggaagagggggcaatggataggggctttccagaagggaaaccagg
aaaggggataatatttggaatgtaaataaataaattatctaatgagccaa
atggtggtggcgcacgcctttaatcccagcacttgggaggcagaggcagg
cggatttctgagttcgaggccagtctggtctacaaagtgagttccaggac
agccagggctgtaaagagagaccctgtcttgaaaaaacaatatatatata
tatatattgaaatttttttaaagaatggaagtaaatccatatttgtctcc
ctacacaaaacacaactccaaatggatcaaagacctcaatatgaagccag
atacattgaacctgatagaagagaaaggggggatattcattgaaaaggaa
acaacctcctgaacagaatagcaatagctcacgtgctaaatcaacaaatt
aaaaatggcacttcatgtaaggcaaaagacactgtcaataggacaaaaga
gaagcatacagaatggaaaaagattttcaccaactcgacacacagtagag
attaatatccaaaatatataaaggatataaaaaactagagatcaacaaac
caaatagtccaatttaaaaatgggatacagacctaaagagataattctca
gcagaggaatctcaagggctgagaagcacttaaagaaattttcaacatcc
ttaggcatcaggaaaatgcaaatcaaaaggaatctgagattctaccttac
ccctgtcagaataactaagatcaaatccaaaagtgatagctcttactggc
aaagatgtggagcaaggggaacactcctccattgctgttgtgagtgcaaa
cttctgcaaccagtatggaaatcaatatggtattttctcagaaaatttga
aatcgtctacctcaagacccagctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_53891411_53892543
seq2: B6Ng01-321A05.b_87_1202

seq1  TGCATATGTAAGTGTGTGTGTGTGTAAATATGTAGTTATGAGGTAAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGTAAGTGTGTGTGTGTGTAAATATGTAGTTATGAGGTAAGTAT  50

seq1  GTAGCAGGGCCCAACTGGAATGCATGAAGACACATGAGTTTGTATATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGGGCCCAACTGGAATGCATGAAGACACATGAGTTTGTATATGGT  100

seq1  AGTATGTGAGTTTATGCATATTTGCTTGTGTAAAAGTTTTTCCTTAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTGAGTTTATGCATATTTGCTTGTGTAAAAGTTTTTCCTTAAGTG  150

seq1  ACTCTCTTCTCCTGGTTCAGTAAAAGTTTATTGCTCCAAACCTCCTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTCTCCTGGTTCAGTAAAAGTTTATTGCTCCAAACCTCCTCCTG  200

seq1  CCTGACAAGGGAGAAGCCAGGCTTCTGGGCAAGAGAGAAAAAGGTTCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAAGGGAGAAGCCAGGCTTCTGGGCAAGAGAGAAAAAGGTTCTAG  250

seq1  CAATTAATCCTTTACTTAATCCTCTGCTGTTAGGCTACTGGCGTTAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATCCTTTACTTAATCCTCTGCTGTTAGGCTACTGGCGTTAATCA  300

seq1  TCCAAGCCAGCAGTTTTTAACTCATTCTTGCTCAGAACGAACAGGAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCCAGCAGTTTTTAACTCATTCTTGCTCAGAACGAACAGGAAAGA  350

seq1  TTTTAGGATATTTTCTAGAAGTTATCAGCAAGTATAAAGTATAGTCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGATATTTTCTAGAAGTTATCAGCAAGTATAAAGTATAGTCAGAG  400

seq1  AGCTAGAAGGCCAGAGACTATCGGTCTTTAAATCTACCTCTATGTCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAAGGCCAGAGACTATCGGTCTTTAAATCTACCTCTATGTCCAGC  450

seq1  TCTGTGTCCTGTTTCAGCCCATTCCAGCCTGGGCAGTCTTCTGGCAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCCTGTTTCAGCCCATTCCAGCCTGGGCAGTCTTCTGGCAATAG  500

seq1  TTATTTCCTTTCTCTAAAGAAATAATAACTTCAGTCTCTTACACTGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCTTTCTCTAAAGAAATAATAACTTCAGTCTCTTACACTGTGTT  550

seq1  GAAATGGTCTTCTTTCCTCAGCACAAAAATCACACAGGAACAGCTCCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGTCTTCTTTCCTCAGCACAAAAATCACACAGGAACAGCTCCTAA  600

seq1  TGTGTGGGTTCCTATTTTTCTTTTTTTCTTTTTGAGAACAGAGCAAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGTTCCTATTTTTCTTTTTTTCTTTTTGAGAACAGAGCAAGGTA  650

seq1  GCTGGGTATCTCAGTAATGGTGACAACACTGGTTGTATCTGACCTAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTATCTCAGTAATGGTGACAACACTGGTTGTATCTGACCTAAGAG  700

seq1  AATGGAGAAAAAGATGCTAACTATAAACACACATTACCCAAGGAACAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAAAAAGATGCTAACTATAAACACACATTACCCAAGGAACAACA  750

seq1  GATCTAAAAACCATCAACTCACCTGTTAACAGTGTTGAATGCCTCAACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAAAAACCATCAACTCACCTGTTAACAGTGTTGAATGCCTCAACTA  800

seq1  GGCTCTTCTGTAGTCCTGTGCTGTTAAGTATAAGGAGCCTGAGGGAAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTCTGTAGTCCTGTGCTGTTAAGTATAAGGAGCCTGAGGGAAAGC  850

seq1  TTAGCCCAGAAGCACACAGGCCATGTTTCCCCACAAGGACCTCTGTCCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCAGAAGCACACAGGCCATGTTTCCCCACAAGGACCTCTGTCCCT  900

seq1  GGTAACTGTCCCATCAAATCCCAACGTGCTGGGGCTCTGCACTTCCTGTA  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGTAACTGTCCCATCAAATCCC-ACGTGCTGGGGCTCTGCACTTCCTGTA  949

seq1  AATCCAACCACTTGTGAAGACTTTGGCTGAATCTTTAACATTTTCCTTCC  1000
      |||||||||||||||| |||||||||||| |||||  |||||||||||||
seq2  AATCCAACCACTTGTG-AGACTTTGGCTG-ATCTT--ACATTTTCCTTCC  995

seq1  CTG-AGATACCATG-CTCTAGCTTATTCCAAATATGGAAAAGTAAAATAA  1048
      ||| |||||||||| ||||||| || ||||||||||| ||||||||   |
seq2  CTGAAGATACCATGCCTCTAGC-TAATCCAAATATGG-AAAGTAAA--TA  1041

seq1  TTTTTAAAAAACGTATTTATATCTTAAATTCTTTCATTTTTTTAAAAAAA  1098
      ||||   |||||||||||||||  | ||||| ||||||||||    ||||
seq2  TTTT---AAAACGTATTTATATTCTTAATTC-TTCATTTTTT----AAAA  1083

seq1  TAAATTCCAAACTATTGAACTTCTGAAAGAATGAG  1133
      | ||||||||   || ||||||||| |||||||||
seq2  TTAATTCCAA--CATGGAACTTCTGGAAGAATGAG  1116