BAC Information

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BAC

Clone NameB6Ng01-321F16
Chromosome14 (Build37)
Map Location 5,968,975 - 6,095,337
singlet/doubletdoublet
Overlap geneLOC100041243, EG666684, LOC100041268, LOC100041279
Upstream geneLOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598
Downstream geneLOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321F16.bB6Ng01-321F16.g
ACCGA110486GA110487
length1,1371,118
definitionB6Ng01-321F16.b B6Ng01-321F16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,094,201 - 6,095,337)(5,968,975 - 5,970,112)
sequence
gaattcacactgctgtgcacaaacccacacacagacacagacacccaagt
gaaaaagaaaagtcaaaaaatgtaacaacatgcttgaaaaacagcagttc
gcttctggtctgggatagctcagttggcctagaggaatgaagggctgggt
ttgagtgagccccagtgttcatctgtgatcccagtgctgaggtaaaggca
gcatggtcagaatgatggagatctgtgagttatcatctggctgctaacta
aaagcaagggaggaactcctagactgctcactcaccccacttaaccctca
ttcaaagtaaatgaaggacaggctacttaggcagcaggtaagaggccact
gaacaaagcatagtcacaaacaaagaagacccaacattccaaggcccttt
taaaggagagattcaggaatgcaaatctagtcagtcaagtcacagaaagt
gagggctggaaaccatccagtggcttagctctctccacaatccttagtga
ccttagtgacctttaatccttagtgaccttagtgacctttaatattccag
tggaatattagcctcggaagttagtatgacgtgggagcatgctggatcaa
gtacatgttttgaattttcggtttcaaaacgtgtgaatgcatctgtctac
cagactaagggccaggagatggtgctggcaggagtctgaagtccatgaga
gaggaaatgacccatgcaaatgcagtcactcctctgtttgcaactagatg
gaaactgtctccactgccagtaaagatgatttcaggaaagatgattgaaa
aacttgctagttacaattttcattttctttttcccagagagcagcaggag
aggcagttgacatttgagctgtgtctctgaactgcccctgtccctaattt
gagttgagagctcacaggggaccacagaccagctccttagctggtttttc
tttccaggatttcttttcagccatagaaaatgaacaaaagcaggctcccc
caggccagcccagccagtcatctcagctgcagaataggtgctttggggag
cgctcatgggtgcaagcacagtccttgcctctgtgaggccagtactgtct
tggcattgcttcaagctcagctcaaggaggcgaccac
gaattctgtgttgatcagagcgggctgcaaggctaggtttttataagtaa
tggatacctgaactttgaggaattaattgcctggctcctggatgtgaagc
tgtgcaatgtttgtctaagcaatcatcatcctttcaaagagtaagaaatg
gaacccgtcttctttcccaaataggcatgggccttagaccacctttcact
tcagtcacccttgactggattctgggaaatgttgctctataaaacctgaa
agtttaatgtgtaagttgaaatacaggatagctgccaaagtgacctttca
ctatatagagtgtggggaagagaacattagaatcataatcacattttggt
cccagcttgtgccctctgtcttctttacattaaaaggaaaagtctgaact
gtgttaggccttttactaggggtctttgtcttgacttgtctgtgaccaaa
tagtcagactaagacaaaggtcaataaaagggcattgttttggttttggc
tgtgtatgggccttctgtactctaggcactgatctggatctccgaccaag
gccatttaatgctattgtttcttagaaagttctcggcagtgtgtacttgt
aggtacagaagttcatattatagggccagaaggacttttgaagtccattt
taccccatgttttccctcgctaaagggaataactgaagcacaagagaggc
tgtctctgtgtttgagaaacatggcagcactctcttgctgaatgacctaa
agggatttcacgttttcagtgtagtttaaaatctcttagagctggcagcg
gatcattgctgggcttaaggttgcacctgaaacctgaaagaatcaaaacc
ccaaatcttagtttccaggaattttcaaggtcaaggctaagtgacaaact
aaggaggaaccgaagggctaaagaattgatctactgaagagagcacctcc
ccccaagtcagtagaagaattcaacattggaaatcactaacagcactgtg
agttttctaaggtgacagcagagctgtcctttctatcctctccctcagcc
ctcttcctactgtgtaggatttgagtcgatgtgcatgtgcacctgctgct
gcaaggtagctctctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_6094201_6095337
seq2: B6Ng01-321F16.b_47_1183 (reverse)

seq1  GTGGTCGCCTCC-TGAGCTGAGCCTGGAGCCAATTGCCCAGGACAGTACC  49
      |||||||||||| |||||||||| || || ||||   ||| ||||||| |
seq2  GTGGTCGCCTCCTTGAGCTGAGCTTGAAG-CAAT--GCCAAGACAGTA-C  46

seq1  TGGCTTCAACAGA-GCAAGG-CTGTGCTTTGCACCCCTGGGCCGCTCCC-  96
      |||| || ||||| |||||| |||||| |||||||| || | ||||||| 
seq2  TGGCCTC-ACAGAGGCAAGGACTGTGC-TTGCACCCATGAG-CGCTCCCC  93

seq1  -AAGCACCTATTCTGGCAGCTGAGATGACTGGCTGGGCTGG-CTGGGGAG  144
       ||||||||||||| |||||||||||||||||||||||||| ||||||  
seq2  AAAGCACCTATTCT-GCAGCTGAGATGACTGGCTGGGCTGGCCTGGGGGA  142

seq1  CCCTGCTTTTGTTCATTTTCTATGGCTG-AAAGAAATCCTGGAAAG-AAA  192
       ||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  GCCTGCTTTTGTTCATTTTCTATGGCTGAAAAGAAATCCTGGAAAGAAAA  192

seq1  ACCAGCTAAGGAGCTGGTCTGTGGTCCCCTGTGAGCTCTCAACTCAAATT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTAAGGAGCTGGTCTGTGGTCCCCTGTGAGCTCTCAACTCAAATT  242

seq1  AGGGACAGGGGCAGTTCAGAGACACAGCTCAAATGTCAACTGCCTCTCCT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGGGGCAGTTCAGAGACACAGCTCAAATGTCAACTGCCTCTCCT  292

seq1  GCTGCTCTCTGGGAAAAAGAAAATGAAAATTGTAACTAGCAAGTTTTTCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTCTGGGAAAAAGAAAATGAAAATTGTAACTAGCAAGTTTTTCA  342

seq1  ATCATCTTTCCTGAAATCATCTTTACTGGCAGTGGAGACAGTTTCCATCT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTTCCTGAAATCATCTTTACTGGCAGTGGAGACAGTTTCCATCT  392

seq1  AGTTGCAAACAGAGGAGTGACTGCATTTGCATGGGTCATTTCCTCTCTCA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAAACAGAGGAGTGACTGCATTTGCATGGGTCATTTCCTCTCTCA  442

seq1  TGGACTTCAGACTCCTGCCAGCACCATCTCCTGGCCCTTAGTCTGGTAGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTCAGACTCCTGCCAGCACCATCTCCTGGCCCTTAGTCTGGTAGA  492

seq1  CAGATGCATTCACACGTTTTGAAACCGAAAATTCAAAACATGTACTTGAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCATTCACACGTTTTGAAACCGAAAATTCAAAACATGTACTTGAT  542

seq1  CCAGCATGCTCCCACGTCATACTAACTTCCGAGGCTAATATTCCACTGGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATGCTCCCACGTCATACTAACTTCCGAGGCTAATATTCCACTGGA  592

seq1  ATATTAAAGGTCACTAAGGTCACTAAGGATTAAAGGTCACTAAGGTCACT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAGGTCACTAAGGTCACTAAGGATTAAAGGTCACTAAGGTCACT  642

seq1  AAGGATTGTGGAGAGAGCTAAGCCACTGGATGGTTTCCAGCCCTCACTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTGTGGAGAGAGCTAAGCCACTGGATGGTTTCCAGCCCTCACTTT  692

seq1  CTGTGACTTGACTGACTAGATTTGCATTCCTGAATCTCTCCTTTAAAAGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACTTGACTGACTAGATTTGCATTCCTGAATCTCTCCTTTAAAAGG  742

seq1  GCCTTGGAATGTTGGGTCTTCTTTGTTTGTGACTATGCTTTGTTCAGTGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGAATGTTGGGTCTTCTTTGTTTGTGACTATGCTTTGTTCAGTGG  792

seq1  CCTCTTACCTGCTGCCTAAGTAGCCTGTCCTTCATTTACTTTGAATGAGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTACCTGCTGCCTAAGTAGCCTGTCCTTCATTTACTTTGAATGAGG  842

seq1  GTTAAGTGGGGTGAGTGAGCAGTCTAGGAGTTCCTCCCTTGCTTTTAGTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTGGGGTGAGTGAGCAGTCTAGGAGTTCCTCCCTTGCTTTTAGTT  892

seq1  AGCAGCCAGATGATAACTCACAGATCTCCATCATTCTGACCATGCTGCCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCAGATGATAACTCACAGATCTCCATCATTCTGACCATGCTGCCT  942

seq1  TTACCTCAGCACTGGGATCACAGATGAACACTGGGGCTCACTCAAACCCA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCAGCACTGGGATCACAGATGAACACTGGGGCTCACTCAAACCCA  992

seq1  GCCCTTCATTCCTCTAGGCCAACTGAGCTATCCCAGACCAGAAGCGAACT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCATTCCTCTAGGCCAACTGAGCTATCCCAGACCAGAAGCGAACT  1042

seq1  GCTGTTTTTCAAGCATGTTGTTACATTTTTTGACTTTTCTTTTTCACTTG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTTCAAGCATGTTGTTACATTTTTTGACTTTTCTTTTTCACTTG  1092

seq1  GGTGTCTGTGTCTGTGTGTGGGTTTGTGCACAGCAGTGTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTGTGTCTGTGTGTGGGTTTGTGCACAGCAGTGTGAATTC  1137

seq1: chr14_5968975_5970112
seq2: B6Ng01-321F16.g_68_1185

seq1  GAATTCTGTGTTGATCAGAGCGGGCTGCAAGGCTAGGTTTTTATAAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTTGATCAGAGCGGGCTGCAAGGCTAGGTTTTTATAAGTAA  50

seq1  TGGATACCTGAACTTTGAGGAATTAATTGCCTGGCTCCTGGATGTGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACCTGAACTTTGAGGAATTAATTGCCTGGCTCCTGGATGTGAAGC  100

seq1  TGTGCAATGTTTGTCTAAGCAATCATCATCCTTTCAAAGAGTAAGAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAATGTTTGTCTAAGCAATCATCATCCTTTCAAAGAGTAAGAAATG  150

seq1  GAACCCGTCTTCTTTCCCAAATAGGCATGGGCCTTAGACCACCTTTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCGTCTTCTTTCCCAAATAGGCATGGGCCTTAGACCACCTTTCACT  200

seq1  TCAGTCACCCTTGACTGGATTCTGGGAAATGTTGCTCTATAAAACCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACCCTTGACTGGATTCTGGGAAATGTTGCTCTATAAAACCTGAA  250

seq1  AGTTTAATGTGTAAGTTGAAATACAGGATAGCTGCCAAAGTGACCTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATGTGTAAGTTGAAATACAGGATAGCTGCCAAAGTGACCTTTCA  300

seq1  CTATATAGAGTGTGGGGAAGAGAACATTAGAATCATAATCACATTTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAGAGTGTGGGGAAGAGAACATTAGAATCATAATCACATTTTGGT  350

seq1  CCCAGCTTGTGCCCTCTGTCTTCTTTACATTAAAAGGAAAAGTCTGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTTGTGCCCTCTGTCTTCTTTACATTAAAAGGAAAAGTCTGAACT  400

seq1  GTGTTAGGCCTTTTACTAGGGGTCTTTGTCTTGACTTGTCTGTGACCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGGCCTTTTACTAGGGGTCTTTGTCTTGACTTGTCTGTGACCAAA  450

seq1  TAGTCAGACTAAGACAAAGGTCAATAAAAGGGCATTGTTTTGGTTTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGACTAAGACAAAGGTCAATAAAAGGGCATTGTTTTGGTTTTGGC  500

seq1  TGTGTATGGGCCTTCTGTACTCTAGGCACTGATCTGGATCTCCGACCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGGGCCTTCTGTACTCTAGGCACTGATCTGGATCTCCGACCAAG  550

seq1  GCCATTTAATGCTATTGTTTCTTAGAAAGTTCTCGGCAGTGTGTACTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTAATGCTATTGTTTCTTAGAAAGTTCTCGGCAGTGTGTACTTGT  600

seq1  AGGTACAGAAGTTCATATTATAGGGCCAGAAGGACTTTTGAAGTCCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAGAAGTTCATATTATAGGGCCAGAAGGACTTTTGAAGTCCATTT  650

seq1  TACCCCATGTTTTCCCTCGCTAAAGGGAATAACTGAAGCACAAGAGAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCATGTTTTCCCTCGCTAAAGGGAATAACTGAAGCACAAGAGAGGC  700

seq1  TGTCTCTGTGTTTGAGAAACATGGCAGCACTCTCTTGCTGAATGACCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTGTTTGAGAAACATGGCAGCACTCTCTTGCTGAATGACCTAA  750

seq1  AGGGATTTCACGTTTTCAGTGTAG-TTAAAATCTCTTAGAGCTGGCAGCG  799
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGGGATTTCACGTTTTCAGTGTAGTTTAAAATCTCTTAGAGCTGGCAGCG  800

seq1  GATCATTGCTGGGCTTAAGGTTGCACCTGAAACCTGAAAGAATCAAAACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTGCTGGGCTTAAGGTTGCACCTGAAACCTGAAAGAATCAAAACC  850

seq1  CCAAATCTTAGTTTCCAGGAATTTTCAAGGTCAAGGCTAAGTGACAAACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCTTAGTTTCCAGGAATTTTCAAGGTCAAGGCTAAGTGACAAACT  900

seq1  AAAGGAGGAACCTGAAGGGCTAAAAGAATTGATCTACTGAAGAGAGCACC  949
       ||||||||||| |||||||| |||||||||||||||||||||||||| |
seq2  -AAGGAGGAACC-GAAGGGCT-AAAGAATTGATCTACTGAAGAGAGCA-C  946

seq1  CCCCCCCCAAGTCAGTAG-AGAATTCAACATTGGAAAATCACTAACAGCA  998
      | |||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  CTCCCCCCAAGTCAGTAGAAGAATTCAACATTGG-AAATCACTAACAGCA  995

seq1  CTGTGAAGTTTTCTAAGGTGGACAGCAGGAAGCCTGTCCTTTTCCTATCC  1048
      ||||| ||||||||||||| ||||||||  || |||||||||  ||||||
seq2  CTGTG-AGTTTTCTAAGGT-GACAGCAG--AG-CTGTCCTTT--CTATCC  1038

seq1  TCTCCCTCAGCCCCTCTTCCCCTACCTGTGTAGGATTTTGAGGTCGAATG  1098
      |||||||||| |||||||  |||| |||||||||| ||||| |||| |||
seq2  TCTCCCTCAG-CCCTCTT--CCTA-CTGTGTAGGA-TTTGA-GTCG-ATG  1081

seq1  TGCATTGTGCA-CTGCTGCTGCAAGGTAGCTCTTCCCTGTG  1138
      |||| |||||| |||||||||||||||||||||   |||||
seq2  TGCA-TGTGCACCTGCTGCTGCAAGGTAGCTCT---CTGTG  1118