BAC Information

Click to search

BAC

Clone NameB6Ng01-323A19
Chromosome14 (Build37)
Map Location 66,840,363 - 66,996,017
singlet/doubletdoublet
Overlap genePtk2b, LOC100043676, Trim35, Stmn4
Upstream geneFzd3, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2
Downstream geneAdra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323A19.bB6Ng01-323A19.g
ACCGA111730GA111731
length1,159284
definitionB6Ng01-323A19.b B6Ng01-323A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,840,363 - 66,841,525)(66,995,734 - 66,996,017)
sequence
gaattctcttttagagttaggagtgtgtggatacacctctctgtgggagt
tacatgcatatgagtatgctggtgagcgtatgtatgcacttggatacatg
cagccagtgaaggacatcagatgtcttttctcatttattctcttccctag
taccttgaggtgaagtctcacaaaaccacaaacacatcacccaggataat
agctgtccagtgagttcttgggacagttgtctctgcccttcaatgctgtt
gttacagatatacgcaggctctgcccctcggtatggttacagatatatga
agccatgctcagctggggattcaagtgtgctggggactcaagtcctcatg
tatgcatcgtaagtgctcttctctatagccatagcctagctcctgacctt
ggactcttggttctcctggccccacctctcaaatgctaggagtacaggtg
tatgtcaccacatgtttatttgtttattagtttgtttgtttgtttgtgat
atatcctggcccagtctagccctggccttccactttctcctgctcggcca
tctgagtctggcagtcacaggtattggctgtcactcccagtgttgaatgt
attcattttaaaagacatctgctcattctcgaatcacactctctcttctg
tattacaaagctcattccttaccgaatggctgagaagcacctgaaaaaat
gttcagcatcgttaatcatcagggaaatgcaaatcaaaacaacactgaga
ttctacctcacaccagtcagaatggctaagatcaaaaattcatgtgacag
cagatgctggcgagggtgcgaagaaagaggaacactcctccattgttggt
ggaattgcaagcttgtacaaccactctggaaatcagtctggcagttcctc
agaaaattggacatagtactaccggaggatcccgcaatacctctcctggg
catatatccagaagatgatccaaccggtaagaacggacacatgctccact
atgtcatagcagtcttatttatatagccagaagctgggaaagaatcccag
atgccccctcacagaaggaagtgataaaagaaatgtggtacattacccaa
tggaatactaactcagctattcaaagaatagattatgatcctgggcatgg
agtggacct
tgatgtgcagcattctctaatgtcagtatttctgtgtttctttcttcctc
ctctcagcccacattgtgtcttagttcttgttacccttgtctttgatttg
cttcatggcttcttgaatttccaccgcagaatctattgacattggttttc
ttttccttttatatgaaaattaccatttctctcagagtagcccacctgcc
tgtgcaactaagtgtaatgagagccattatttggtgctttgatctttttt
cacgattcttattggtttgggcgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66840363_66841525
seq2: B6Ng01-323A19.b_46_1204

seq1  GAATTCTCTTTTAGAGTTAGGAGTGTGTGGATACACCTCTCTGTGGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTAGAGTTAGGAGTGTGTGGATACACCTCTCTGTGGGAGT  50

seq1  TACATGCATATGAGTATGCTGGTGAGCGTATGTATGCACTTGGATACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCATATGAGTATGCTGGTGAGCGTATGTATGCACTTGGATACATG  100

seq1  CAGCCAGTGAAGGACATCAGATGTCTTTTCTCATTTATTCTCTTCCCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTGAAGGACATCAGATGTCTTTTCTCATTTATTCTCTTCCCTAG  150

seq1  TACCTTGAGGTGAAGTCTCACAAAACCACAAACACATCACCCAGGATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGAGGTGAAGTCTCACAAAACCACAAACACATCACCCAGGATAAT  200

seq1  AGCTGTCCAGTGAGTTCTTGGGACAGTTGTCTCTGCCCTTCAATGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCAGTGAGTTCTTGGGACAGTTGTCTCTGCCCTTCAATGCTGTT  250

seq1  GTTACAGATATACGCAGGCTCTGCCCCTCGGTATGGTTACAGATATATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGATATACGCAGGCTCTGCCCCTCGGTATGGTTACAGATATATGA  300

seq1  AGCCATGCTCAGCTGGGGATTCAAGTGTGCTGGGGACTCAAGTCCTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGCTCAGCTGGGGATTCAAGTGTGCTGGGGACTCAAGTCCTCATG  350

seq1  TATGCATCGTAAGTGCTCTTCTCTATAGCCATAGCCTAGCTCCTGACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATCGTAAGTGCTCTTCTCTATAGCCATAGCCTAGCTCCTGACCTT  400

seq1  GGACTCTTGGTTCTCCTGGCCCCACCTCTCAAATGCTAGGAGTACAGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTTGGTTCTCCTGGCCCCACCTCTCAAATGCTAGGAGTACAGGTG  450

seq1  TATGTCACCACATGTTTATTTGTTTATTAGTTTGTTTGTTTGTTTGTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACCACATGTTTATTTGTTTATTAGTTTGTTTGTTTGTTTGTGAT  500

seq1  ATATCCTGGCCCAGTCTAGCCCTGGCCTTCCACTTTCTCCTGCTCGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTGGCCCAGTCTAGCCCTGGCCTTCCACTTTCTCCTGCTCGGCCA  550

seq1  TCTGAGTCTGGCAGTCACAGGTATTGGCTGTCACTCCCAGTGTTGAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCTGGCAGTCACAGGTATTGGCTGTCACTCCCAGTGTTGAATGT  600

seq1  ATTCATTTTAAAAGACATCTGCTCATTCTCGAATCACACTCTCTCTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTTAAAAGACATCTGCTCATTCTCGAATCACACTCTCTCTTCTG  650

seq1  TATTACAAAGCTCATTCCTTACCGAATGGCTGAGAAGCACCTGAAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAAAGCTCATTCCTTACCGAATGGCTGAGAAGCACCTGAAAAAAT  700

seq1  GTTCAGCATCGTTAATCATCAGGGAAATGCAAATCAAAACAACACTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCATCGTTAATCATCAGGGAAATGCAAATCAAAACAACACTGAGA  750

seq1  TTCTACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAG  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCTACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCATGTGACAG  800

seq1  CAGATGCTGGCGAGGGTGCGAAGAAAGAGGAACACTCCTCCATTGTTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTGGCGAGGGTGCGAAGAAAGAGGAACACTCCTCCATTGTTGGT  850

seq1  GGAATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTC  900

seq1  AGAAAATTGGACATAGTACTACCGGAGGATCCCGCAATACCTCTCCTGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTGGACATAGTACTACCGGAGGATCCCGCAATACCTCTCCTGGG  950

seq1  CATATATCCAGAAGATGATCCAACCGGTAAGAA-GGACACATGCTCCACT  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATATATCCAGAAGATGATCCAACCGGTAAGAACGGACACATGCTCCACT  1000

seq1  ATGTTCATAGCAGTCTTATTTATAATAGCCAGAAGCT-GGAAAGAA-CCC  1047
      ||| ||||||||||||||||||| ||||||||||||| |||||||| |||
seq2  ATG-TCATAGCAGTCTTATTTAT-ATAGCCAGAAGCTGGGAAAGAATCCC  1048

seq1  AGATGCCCCTCAACAG-AGGAGTGGATAAAGAAAATGTGGTACATTTACA  1096
      |||||||||   |||| ||||   ||||||  |||||||||||| |||| 
seq2  AGATGCCCCCTCACAGAAGGAAGTGATAAAAGAAATGTGGTACA-TTACC  1097

seq1  CAATGGAGTACT-ACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCT  1145
      ||||||| |||| |||||||||||  ||||||| |  ||||||   ||||
seq2  CAATGGAATACTAACTCAGCTATT-CAAAGAAT-AGATTATGA---TCCT  1142

seq1  GGGCAAATGGA-TGGACCT  1163
      ||||  ||||| |||||||
seq2  GGGC--ATGGAGTGGACCT  1159

seq1: chr14_66995734_66996017
seq2: B6Ng01-323A19.g_71_354 (reverse)

seq1  CCCCCCCCCCCCGCCCAAACCAATAAGAATCGTGAAAAAAGATCAAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCGCCCAAACCAATAAGAATCGTGAAAAAAGATCAAAGCA  50

seq1  CCAAATAATGGCTCTCATTACACTTAGTTGCACAGGCAGGTGGGCTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAATGGCTCTCATTACACTTAGTTGCACAGGCAGGTGGGCTACTC  100

seq1  TGAGAGAAATGGTAATTTTCATATAAAAGGAAAAGAAAACCAATGTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAAATGGTAATTTTCATATAAAAGGAAAAGAAAACCAATGTCAAT  150

seq1  AGATTCTGCGGTGGAAATTCAAGAAGCCATGAAGCAAATCAAAGACAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGCGGTGGAAATTCAAGAAGCCATGAAGCAAATCAAAGACAAGG  200

seq1  GTAACAAGAACTAAGACACAATGTGGGCTGAGAGGAGGAAGAAAGAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAGAACTAAGACACAATGTGGGCTGAGAGGAGGAAGAAAGAAACA  250

seq1  CAGAAATACTGACATTAGAGAATGCTGCACATCA  284
      ||||||||||||||||||||||||||||||||||
seq2  CAGAAATACTGACATTAGAGAATGCTGCACATCA  284