BAC Information

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BAC

Clone NameB6Ng01-323P03
Chromosome14 (Build37)
Map Location 71,337,194 - 71,338,314
singlet/doubletsinglet
Overlap geneGfra2
Upstream gene1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2
Downstream geneLOC100043132, LOC100043136, LOC668477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323P03.bB6Ng01-323P03.g
ACCGA112389GA112390
length1,1761,124
definitionB6Ng01-323P03.b B6Ng01-323P03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagtcatacagattacattctttaatcacattgaattaagttag
aattcagtaacaaaaacatctctgtgaaatgcccagacgttagcccacat
tccaaaacagcccacaattccaaaaagaaatcaaaatatcaagtattctg
gcctacataaaaatagaaagacagcaaagtaaaattctcagatagtgcca
ggttatttgtggggaatttgtagaattaaacttatttttttttcttttac
aagaatagaagctgggggcctgagtttcttccttagaacaccagaaaaag
atcagctgactaaagtcaaagagaaagaaaggaagcaataaggaccagag
taaaatcaatacaacaggggatgggaaagaaacagaaagatcaatgaagc
tgaaagatagttcggtgaggaagatcaataaaattgattgattccaatcc
aggctgatcagaaaaggagagagaatggcaaggtatcaatactaagaatg
atagtgagagactccactgctgtgaattttacaggtgttaaaatgataag
agagcgtggtaaaatgctttatgtcagagaattgggcgacttacaggaga
tgaatatcatccttgaaatctgaaaactgttggagctcaatgatgaactt
gatgacgtcagtaaccattaaacgaatttcttccaacaaattctagactc
ttaatggttggctggtatcttttactattatttaagggaaaaaaactatc
ccttctacacaaagtctccccaaaactaaggaagcagcactttctaacag
cctctgaggtccttgtcttagtttgcagtctatcattgtgataactgtga
ccaacaacaccctgagggggaaaggtttatttttccattacagttctcag
gtcactctccatcactgagggaagtcaggcagaagctaaagcagcaacct
ggagattaaatgtttttggggcacaatgtaagatgtaaaaaacaaatttc
tagtagacccctgtatgacctagtagacaaagttcttaagccatagctat
gaaaatatgataaaaaaccaaggtgatgacctgtgacttttaatggaatg
gtagacatgcctacattccgaagataagcatgtaaagcctaccaaacccc
acttcaggatggtataagtgaaccct
gaattcttgggactggtgtgctattttccctaggtgaaggggagctgtaa
gccagaattaagcagctgctattgtcactacagcaggcaggaggttttcc
tgtttgttgctgggactgctctctgctgagtggtcattacggagggcaga
gcttgcttccctctgactaccccagtgctctaccaggactggcctgagca
tctttagaaagatgcggagaccttcttagccgtcatcccgagactttagg
aaagatgatgcccaaagcagaatagctgagaaatatatctgtgtgttgat
atctctaaatcaccaactggctagttgtgtcagaaaaggggctgttgaga
gacgtagaaaaagatatgagagcatgttgattatactgagtttctgaggg
ctgaggtatacactttttgggctctgtttctttaaggattttgcttttct
gtgggtgtcttatttattttataataataataacaacaataataatgcca
tttgaatgtctcactttgcaacccaagctaacctggaatatacttgtggt
ccaggtgagccttgaactcatggcactactcctgcttcagctctccaagt
gttaaaattatggttctgaggtccctgtgtccctcaccccttcatcacct
acatagggggaatttcaaatgagtaaggatgattgcctgttttggggaca
atttgaaatccccaagacaccaacaagtagtaggcatgaagcatgataag
tcctgagcctggaaggctccaggaaagagctgtagttattaagctatggc
ttcccctttcccgcgccccatcccttccctgtaccctccttgctccctct
caaaactcatggtgtctttttctttaatgttatatatacacacacacata
cacatatatgtctaaatacacaaatagaacttgctcagtccattaatatt
acttgtgtgtgcattattttcattctgcccctttggtatttgaataatca
gccagtgcacagacctgaagaagaactgtttccccggtctcctcacattg
cctcctagcctgttatttctttggctacgggtgaatatctcaatggagtt
tcccctcttcctgttagccatgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_71337194_71338314
seq2: B6Ng01-323P03.g_68_1191

seq1  GAATTCTTGGGACTGGTGTGCTATTTTCCCTAGGTGAAGGGGAGCTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGACTGGTGTGCTATTTTCCCTAGGTGAAGGGGAGCTGTAA  50

seq1  GCCAGAATTAAGCAGCTGCTATTGTCACTACAGCAGGCAGGAGGTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAATTAAGCAGCTGCTATTGTCACTACAGCAGGCAGGAGGTTTTCC  100

seq1  TGTTTGTTGCTGGGACTGCTCTCTGCTGAGTGGTCATTACGGAGGGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTGCTGGGACTGCTCTCTGCTGAGTGGTCATTACGGAGGGCAGA  150

seq1  GCTTGCTTCCCTCTGACTACCCCAGTGCTCTACCAGGACTGGCCTGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTTCCCTCTGACTACCCCAGTGCTCTACCAGGACTGGCCTGAGCA  200

seq1  TCTTTAGAAAGATGCGGAGACCTTCTTAGCCGTCATCCCGAGACTTTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGAAAGATGCGGAGACCTTCTTAGCCGTCATCCCGAGACTTTAGG  250

seq1  AAAGATGATGCCCAAAGCAGAATAGCTGAGAAATATATCTGTGTGTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGATGCCCAAAGCAGAATAGCTGAGAAATATATCTGTGTGTTGAT  300

seq1  ATCTCTAAATCACCAACTGGCTAGTTGTGTCAGAAAAGGGGCTGTTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAAATCACCAACTGGCTAGTTGTGTCAGAAAAGGGGCTGTTGAGA  350

seq1  GACGTAGAAAAAGATATGAGAGCATGTTGATTATACTGAGTTTCTGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTAGAAAAAGATATGAGAGCATGTTGATTATACTGAGTTTCTGAGGG  400

seq1  CTGAGGTATACACTTTTTGGGCTCTGTTTCTTTAAGGATTTTGCTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTATACACTTTTTGGGCTCTGTTTCTTTAAGGATTTTGCTTTTCT  450

seq1  GTGGGTGTCTTATTTATTTTATAATAATAATAACAACAATAATAATGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGTCTTATTTATTTTATAATAATAATAACAACAATAATAATGCCA  500

seq1  TTTGAATGTCTCACTTTGCAACCCAAGCTAACCTGGAATATACTTGTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGTCTCACTTTGCAACCCAAGCTAACCTGGAATATACTTGTGGT  550

seq1  CCAGGTGAGCCTTGAACTCATGGCACTACTCCTGCTTCAGCTCTCCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGAGCCTTGAACTCATGGCACTACTCCTGCTTCAGCTCTCCAAGT  600

seq1  GTTAAAATTATGGTTCTGAGGTCCCTGTGTCCCTCACCCCTTCATCACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATTATGGTTCTGAGGTCCCTGTGTCCCTCACCCCTTCATCACCT  650

seq1  ACATAGGGGGAATTTCAAATGAGTAAGGATGATTGCCTGTTTTGGGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGGGGAATTTCAAATGAGTAAGGATGATTGCCTGTTTTGGGGACA  700

seq1  ATTTGAAATCCCCAAGACACCAACAAGTAGTAGGCATGAAGCATGATAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAATCCCCAAGACACCAACAAGTAGTAGGCATGAAGCATGATAAG  750

seq1  TCCTGAGCCTGGAAGGCTCCAGGAAAGAGCTGTAGTTATTAAGCTATGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCCTGGAAGGCTCCAGGAAAGAGCTGTAGTTATTAAGCTATGGC  800

seq1  TTCCCCTTTCCCGCGCCCCATCCCTTCCCTGTACCCTCCTTGCTCCCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTTCCCGCGCCCCATCCCTTCCCTGTACCCTCCTTGCTCCCTCT  850

seq1  CAAAACTCATGGTGTCTTTTTCTTTAATGTTATATATACACACACACATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTCATGGTGTCTTTTTCTTTAATGTTATATATACACACACACATA  900

seq1  CACATATATGTCTAAATACACAAATAGAACTTGCTCAGTCCATTAATATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATATGTCTAAATACACAAATAGAACTTGCTCAGTCCATTAATATT  950

seq1  ACTTGTGTGTGCATTATTTCAATTCTGCCCCTTTGGTA-TTGTATAATCA  999
      |||||||||||||||||||  ||||||||||||||||| ||| |||||||
seq2  ACTTGTGTGTGCATTATTTTCATTCTGCCCCTTTGGTATTTGAATAATCA  1000

seq1  GCCAGGTGGCACAGACCTGAGGAAGACCGTTTCCCCCGGTCTCTCAACAT  1049
      |||||   |||||||||||| ||||| |  || ||||||||||   ||||
seq2  GCCAG--TGCACAGACCTGAAGAAGAACTGTTTCCCCGGTCTCCTCACAT  1048

seq1  TGCTCCTTAGCCTG-TATTTCTTTGCATACGGGTG-ATATCTCA--TGAG  1095
      |||  | ||||||| ||||||||||  |||||||| ||||||||   |||
seq2  TGCCTCCTAGCCTGTTATTTCTTTGGCTACGGGTGAATATCTCAATGGAG  1098

seq1  TTTCCCCTCTTCCCTGTTAG-CATGTC  1121
      ||||||||||| |||||||| ||||||
seq2  TTTCCCCTCTT-CCTGTTAGCCATGTC  1124