BAC Information

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BAC

Clone NameB6Ng01-324D01
Chromosome14 (Build37)
Map Location 24,087,523 - 24,088,086
singlet/doubletsinglet
Overlap genenone
Upstream gene1700112E06Rik, EG435392, LOC665068
Downstream geneKcnma1, LOC620499, Dlg5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324D01.bB6Ng01-324D01.g
ACCGA112570GA112571
length1,123957
definitionB6Ng01-324D01.b B6Ng01-324D01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaatttatttttgcttcttctgttgcacacacacaaacactgcg
ttcatcctcctccacccccagtattcatgccagagtcttaccttatccca
tcatcaaatcaaagtcttaattttagcatgtcacataagtaaatatcatc
caaattagatctaaactgagatggaatacagattcattctgggataattc
tgactcagcttaaagcctttgaaaactgtgtttccgtaactcctttcatg
ggtattttgttcccaatctaaggagcaatgaagtatccacccattggtct
tccctctccttgattttcttgtgttttgcaacttgtatcttgggtgttct
atgtttctgggctaatatacacttatcaatgagtgcatatctaatgactt
ctattgtgactgggttacctcactaaggatgatatcctccacatacatcc
atttgtccaagaatttcataaatccactgtttttaattgctgagtagtac
tccattatgtaaatgtaccacattttctgtatccattcttctgttgaggg
acatctgggttctttccagcttctggctattataaataaggctgttatga
acatagtggagcatgtgttcttattgccagttggaacttcttctgggtat
gtgcccaggagaggtattgctggatcttccggtagtattatgtccaattt
tctgaggaacctacagactgacttccagagtggttgtacaagcttgcaat
cccaccaacaatggaggagtgttcctctttctccacatcctcgccagcat
ctgctgtcacctgaatttttgatcttagccatttctgactggtgtgaagt
ggaatctcaagggttgttttgatttgcatttccctgatgattaaaggatg
ttgaacatttttttcagtgctttctcagccattcagtattcctcagttga
gaatttttttgttttaactctgaaccccattttttaatggggttatttga
atttctgagttctagcttctggagctcttggataatattgggtaatagtt
cccctatcagattagattggtaaaatccttcacattctgttggtggcctt
tttgtctctaatttgaatggata

gaattctgggatagagccaagcacaagaggacttgcaggggaaagatgtg
aagacagacgcctggtcactgggcagaggtgagcagggatgacttggcag
aaggtagataaatacaaatggattatttaaaaatattagctagtcaggga
accagcctagctatatggcctaggtatttgtaaatctattttgagtctga
gtcataataatggaagcttgggacccagggctaaaaccagcccaccatac
aacagcagtttccaatgtaatcactgtagaaagaggggctgaggccaata
tatggccctccctccttcttctccattagccctgccctgagtctatgtat
tgtaaaacccaggatgttcaagattggtgtcaacacctttgtgtctcatg
gggtatcccgggcctttgtgaattctgagttccttgcaatcaccagacat
gctctccaaccccactttcagagagaaagcaagcccccttcaaagctata
ccacctgcaaggtatctggtcctcactgtggaaaactttcctccctacca
gattgcaaattactcaacaggcaacatatgctcctggtgaataaatggct
acctcactctcatgtccctgcaaagcccaactcccacagaacctctgcta
ggtttctgcttccaagtcctgtgcaggtgatcctgtctggcctgcagtac
cgtccaactctgaaccataagtacctctcacgatcaaaatgtattttatt
gtgtctattgggtcgggagctatgcattcatctcatgtgttttgtggcaa
aggctttttccataacctcataaccaaaaggaatgaactagaatgttctt
atcttcctgtcttccttccaccatcacatgtttttaaaatagtgctgagg
aacccagaacccttgtaaatgctagacaaccaagtgtgtgtgcgcgtgtg
tgtatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_24087523_24088086
seq2: B6Ng01-324D01.g_459_1023 (reverse)

seq1  ACATACACACACGCGCACACACACTTGGTTGTCTAGCATTTACAA-GGTT  49
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACATACACACACGCGCACACACACTTGGTTGTCTAGCATTTACAAGGGTT  50

seq1  CTGGGTTCCTCAGCACTATTTTAAAAACATGTGATGGTGGAAGGAAGACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCCTCAGCACTATTTTAAAAACATGTGATGGTGGAAGGAAGACA  100

seq1  GGAAGATAAGAACATTCTAGTTCATTCCTTTTGGTTATGAGGTTATGGAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATAAGAACATTCTAGTTCATTCCTTTTGGTTATGAGGTTATGGAA  150

seq1  AAAGCCTTTGCCACAAAACACATGAGATGAATGCATAGCTCCCGACCCAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTTGCCACAAAACACATGAGATGAATGCATAGCTCCCGACCCAA  200

seq1  TAGACACAATAAAATACATTTTGATCGTGAGAGGTACTTATGGTTCAGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACAATAAAATACATTTTGATCGTGAGAGGTACTTATGGTTCAGAG  250

seq1  TTGGACGGTACTGCAGGCCAGACAGGATCACCTGCACAGGACTTGGAAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACGGTACTGCAGGCCAGACAGGATCACCTGCACAGGACTTGGAAGC  300

seq1  AGAAACCTAGCAGAGGTTCTGTGGGAGTTGGGCTTTGCAGGGACATGAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTAGCAGAGGTTCTGTGGGAGTTGGGCTTTGCAGGGACATGAGA  350

seq1  GTGAGGTAGCCATTTATTCACCAGGAGCATATGTTGCCTGTTGAGTAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTAGCCATTTATTCACCAGGAGCATATGTTGCCTGTTGAGTAATT  400

seq1  TGCAATCTGGTAGGGAGGAAAGTTTTCCACAGTGAGGACCAGATACCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCTGGTAGGGAGGAAAGTTTTCCACAGTGAGGACCAGATACCTTG  450

seq1  CAGGTGGTATAGCTTTGAAGGGGGCTTGCTTTCTCTCTGAAAGTGGGGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGTATAGCTTTGAAGGGGGCTTGCTTTCTCTCTGAAAGTGGGGTT  500

seq1  GGAGAGCATGTCTGGTGATTGCAAGGAACTCAGAATTCACAAAGGCCCGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCATGTCTGGTGATTGCAAGGAACTCAGAATTCACAAAGGCCCGG  550

seq1  GATACCCCATGAGAC  564
      |||||||||||||||
seq2  GATACCCCATGAGAC  565


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