BAC Information

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BAC

Clone NameB6Ng01-324F18
Chromosome14 (Build37)
Map Location 43,820,252 - 43,821,370
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666233, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454
Downstream geneLOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324F18.bB6Ng01-324F18.g
ACCGA112693GA112694
length1,0291,117
definitionB6Ng01-324F18.b B6Ng01-324F18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggcacatttgcacaatg
gaatactactcagctattaaaaaatgaatttatgaaattcctagccaaat
ggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaagg
aactcacacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgctaaacgcatgaaattcaaga
agaaggaagaccaaagtgtggacactttaccccttcctagaaatgggaac
aaaacacccattgaacgagtaacagagacaaaatttggagctgtgacaaa
aagatggaccatctagtgattgccatatgcagggatccatcccataatca
gcttccaaatgctgacaccattgcacacactagcaaaattttgctgaaag
gacccagatatagctctctcttgtgagactatgccagggcctagcaaaca
cagaagtggatgatcatagtcagctattggatggatcacacgggccccaa
tgcaggagctagagatattacgcaaggagctaaagggaactgcaaaccta
tagtggaacaacattatgaaactaaccag
gaattccacgggcctatgtttaggagtctggggacagggacccacaaaat
cctggacatccagacagtgctgggttgcagagagttcacagcaggtttga
ccctgctggcctgcaaggataactgggcaaggggttctcagaatcttgga
catgcaggcactgctagaagtctcagaggagctgagcatggaggaggcca
gcaggctaagaactagccctgaaatcagggaatgggaaattctggattag
ctcagaggtgactagcccaggagtattgaggggcctgctgatggagactt
agatggcaagactctgtaggcaaaggctttttctccatgtaacccacagt
tggtttgatgagagagacagtccttggttgtaaactgtttattgattgtt
tttcatggaaatgaaagcataacatgtcttaaggttagactagaagttaa
gtaacttctgaggaaggaatgtccaggaagggaagcttattgactgaacc
ctaccatcttctattacctcattagcagggagaaccctattctcttctaa
ataaccacaggccatgttcctatatacagattttggtcccatgaaagagg
cctggtaggaagcaggtaacacttttgccatttctgtgggtctgggacat
ctaacccactcaactttaccaaattctggacatggtagtctactgtccca
ggtgttagtttgagatttattgatgtgaggagacaccaggtcatatgttt
agtatgcgggtctcaatgcctaccctccacactgacacactgtttctaac
aaggccacaactcctaaacgtaccactcacatattcaagccaccacactc
ctctgcaatctcccaagacatttacctcactctgtcctactgttttcctt
tttctccttcacaatttatgtgttctattatttttcttgaaatatcctcc
tattaacccaacactagtgcattacctttctatggatactgcagtttaat
gcacatctctagacattcatgtaccattcacatagaacacatgatgttgg
tatttgttctttttgggtctgctatattcactcaaaatataattcatggg
tcatccattaactgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43820252_43821370
seq2: B6Ng01-324F18.g_69_1185

seq1  GAATTCCACGGGCCTATGTTTAGGAGTCTGGGGACAGGGACCCACAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGGGCCTATGTTTAGGAGTCTGGGGACAGGGACCCACAAAAT  50

seq1  CCTGGACATCCAGACAGTGCTGGGTTGCAGAGAGTTCACAGCAGGTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACATCCAGACAGTGCTGGGTTGCAGAGAGTTCACAGCAGGTTTGA  100

seq1  CCCTGCTGGCCTGCAAGGATAACTGGGCAAGGGGTTCTCAGAATCTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGGCCTGCAAGGATAACTGGGCAAGGGGTTCTCAGAATCTTGGA  150

seq1  CATGCAGGCACTGCTAGAAGTCTCAGAGGAGCTGAGCATGGAGGAGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGCACTGCTAGAAGTCTCAGAGGAGCTGAGCATGGAGGAGGCCA  200

seq1  GCAGGCTAAGAACTAGCCCTGAAATCAGGGAATGGGGAATTCTGGATTAG  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCAGGCTAAGAACTAGCCCTGAAATCAGGGAATGGGAAATTCTGGATTAG  250

seq1  CTCAGAGGTGACTAGCCCAGGAGTATTGAGGGGCCTTCTGATGGAGACTT  300
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTCAGAGGTGACTAGCCCAGGAGTATTGAGGGGCCTGCTGATGGAGACTT  300

seq1  AGATGGCAAGACTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCAAGACTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCCACAGT  350

seq1  TGGTTTGATGAGAGAGACAGTCCTTGGTTGTAAACTGTTTATTGATTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGATGAGAGAGACAGTCCTTGGTTGTAAACTGTTTATTGATTGTT  400

seq1  TTTCATGGAAATGAAAGCATAACATGTCTTAAGGTTAGACTAGAAGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGGAAATGAAAGCATAACATGTCTTAAGGTTAGACTAGAAGTTAA  450

seq1  GTAACTTCTGAGGAAGGAATGTCCAGGAAGGGAAGCTTATTGACTGAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTCTGAGGAAGGAATGTCCAGGAAGGGAAGCTTATTGACTGAACC  500

seq1  CTACCATCTTCTATTACCTCATTAGCAGGGAGAACCCTATTCTCTTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATCTTCTATTACCTCATTAGCAGGGAGAACCCTATTCTCTTCTAA  550

seq1  ATAACCACAGGCCATGTTCCTATATACAGATTTTGGTCCCATGAAAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCACAGGCCATGTTCCTATATACAGATTTTGGTCCCATGAAAGAGG  600

seq1  CCTGGTAGGAAGCAGGTAACACTTTTGCCATTTCTGTGGGTCTGGGACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTAGGAAGCAGGTAACACTTTTGCCATTTCTGTGGGTCTGGGACAT  650

seq1  CTAACCCACTCAACTTTACCAAATTCTGGACATGGTAGTCTACTGTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCACTCAACTTTACCAAATTCTGGACATGGTAGTCTACTGTCCCA  700

seq1  GGTGTTAGTTTGAGATTTATTGATGTGAGGAGACACCAGGTCATATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTAGTTTGAGATTTATTGATGTGAGGAGACACCAGGTCATATGTTT  750

seq1  AGTATGCGGGTCTCAATGCCTACCCTCCACACTGACACACTGTTTCTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCGGGTCTCAATGCCTACCCTCCACACTGACACACTGTTTCTAAC  800

seq1  AAGGCCACAACTCCTAAACGTACCACTCACATATTCAAGCCACCACACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCACAACTCCTAAACGTACCACTCACATATTCAAGCCACCACACTC  850

seq1  CTCTGCAATCTCCCAAGACATTTACCTCACTCTGTCCTACTGTTTTCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAATCTCCCAAGACATTTACCTCACTCTGTCCTACTGTTTTCCTT  900

seq1  TTTCTCCTTCACAATTTATGTGTTCTATTA-TTTTCTTGAAATATCCTCC  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTCTCCTTCACAATTTATGTGTTCTATTATTTTTCTTGAAATATCCTCC  950

seq1  TA-TAACCCAACACTAGTGCATTACC-TTCTATGGATACTGCAGTTTAAA  997
      || ||||||||||||||||||||||| |||||||||||||||||||| ||
seq2  TATTAACCCAACACTAGTGCATTACCTTTCTATGGATACTGCAGTTT-AA  999

seq1  TGCACATCTCTAGACATTCAATGTTACCATCCACATAAGACACATGATG-  1046
      ||||||||||||||||||| ||| |||||| ||||||  |||||||||| 
seq2  TGCACATCTCTAGACATTC-ATG-TACCATTCACATAGAACACATGATGT  1047

seq1  TGGTATTTG-TCTTTTTGGGTCTGGGTTATATCACTCAAAAATATTATTC  1095
      ||||||||| ||||||||||||||   ||| |||||| ||||||| ||||
seq2  TGGTATTTGTTCTTTTTGGGTCTGCTATAT-TCACTC-AAAATATAATTC  1095

seq1  ATGTGTCCATCCATTAACCTGTAA  1119
      ||| || |||||||||| ||||||
seq2  ATGGGT-CATCCATTAA-CTGTAA  1117