BAC Information

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BAC

Clone NameB6Ng01-324M15
Chromosome14 (Build37)
Map Location 59,182,722 - 59,183,842
singlet/doubletsinglet
Overlap genenone
Upstream geneN6amt2, Xpo4, Lats2, Sap18, F630043A04Rik, Mrp63, Zdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
Downstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324M15.bB6Ng01-324M15.g
ACCGA113015GA113016
length1,1231,186
definitionB6Ng01-324M15.b B6Ng01-324M15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgagcagagattcccgagggccaggagctgagggaccagagc
atgagcctggtaatgacatggcacactaatacctcctctttgttcccttt
tgcatgagggtagtaaagactgagactatgggtgtaggtgtctcacttct
ttgcaatgtgatctctaccaattctgtgcttggatccagagtaagatggg
aacaaatctgcttggcagtgtttgtatgatcaaatgaatgtccaaatcct
tttagcagaaacaagcctgctatgacttgggtttctgcttctttaagagt
ctttgggtgtttttaacattttcccatttaactggagaagaagcattgta
tatttttcatgcatgtgtacaacatgcttttccattttctttcttattct
tccttttagagcccaatgtcctgaagcctcatgctcacaaggtctagagg
tctgcagtgggattgaatcagggcttcagctcattccctacatcctatat
tttacacttaaatttttatttttacgtgagagtctgtcatatgtgtacat
tgcccgtggaaggcagaagagggttagaccttataaagctgttgctacag
gcaactgtgagccactaggtgtgtaagatcagcaaggcttcctaaccagc
ccagcaaagtcacccttactttgcacttgaacatcttcaaaggtcaagtt
tcattatagctaaagaaatgcctctataaagaccttgaaactcagtggcg
agcattgcttctttgaactgtgatgttattgtgttcatctacttataagt
tacattgttgttgctactgtttaaagccagagagctgttactggtcattg
ggtgttactaagcatcccatggctatggctttggtgtggtagcctgtttc
tcccaggcctgcataaccaccatcatggaacagtgttgtgctgtggtgtt
agcccccagttacataagatggcagaacaatgtatgtctttgcactttta
atagggtaatttgacatatgcagaagagagagatcataggttcagttaag
gtgggggtttctactgtactcaatcctccttccaccctggcatggtgaac
agtgaaggagtctgcaatatata
gaattcatgcagaaaatgtggttcatttacacagtggaataatattcagc
tattaaaaaggaggacataatgaactttgcaggcaaatggatggaattag
aaaatatcatcttaggttcccagatctcaccgagactagtctgcccaggt
gagagtatggactaagaagctaacagcttctgggacaggcaggagccaca
gagcttctgaggcagaccccattttgggctccagacatctgggcaccttt
ccggccagaggagaggtgtctgcctggcccaggagggcattgcctgagca
tctgtgggagacgtcttggttcccagatccctcctagaatagtctgtgca
ggtgagagtgtggactatagaagctaacagcttctgggacaggccctgtt
tcgggccttcatcttctgccaggaggcaagtctgaacaccagatatctgt
gcaccttccctgcaagaagagagcttgcctgcagagagtgctctaaccac
cgaaactcaggagagagctactctcccaggtctgctggtagaggctaaca
gaatcacgagagcaacaagctctaaccagagacaactataacaactgact
ccagagattaccagatggcaaaaggcagacgtaagaatcttactaacaga
aaccaagaccactcaccatcaccagaacccagcactctcacctcagccag
tcctggataccccaacacacccgaaaagctagacccggatttaaaggcat
atctcatgatgatggtagaggacatcaagaaggactttaataactcagtt
aaagaaaatacaagagaacactgctaaagagttacaagtccttaaagaaa
acaggaaaacacaaccaaagaggtagaagtccacagccaaacaggtgatg
ggaatgaacaaaaccatactagacctaaaaaggaagtagaaacaataaag
aaaacccaaaatgaggcaacgctggagaatagaaaaacctaggaaagaaa
tctggaaccatagattgagcatcacacagatacagagatggaagaaagaa
tcttcagtgcagaagattccatagaagaacatcggcacactatccaaaga
aaacccaaaacgcaaagatctactcaactcagatccaggtaccaatggaa
gaccagcctacgataataggaagttgtagtgaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_59182722_59183842
seq2: B6Ng01-324M15.b_44_1166 (reverse)

seq1  TATATATTGCAGACTCTTTCACTG-TCA-CATGC--AGGTGGAGGAAGGA  46
      |||||||||||||||| ||||||| ||| |||||   |||||| | ||||
seq2  TATATATTGCAGACTCCTTCACTGTTCACCATGCCAGGGTGGAAGGAGGA  50

seq1  TGGAGTAACAGTTAGAA--CCCCA-CTTAACTG-ACCTATGATCCTCTCT  92
      | |||| |||| |||||  ||||| |||||||| ||||||||| ||||||
seq2  TTGAGT-ACAG-TAGAAACCCCCACCTTAACTGAACCTATGAT-CTCTCT  97

seq1  CTTCTGCCTAATGTC-AATTACCCTATTAAAAGTGCAAAGACATACATTG  141
      ||||||| | ||||| ||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAT-ATGTCAAATTACCCTATTAAAAGTGCAAAGACATACATTG  146

seq1  TTCTGCCATCCTTATGTAACTGGGGGCCTAACACCACAGCACAACACTGT  191
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  TTCTGCCAT-CTTATGTAACTGGGGG-CTAACACCACAGCACAACACTGT  194

seq1  TCCATGATGGTGGTTATGCAGGCCTGGGAGAAACAGGCCTACCACACCAA  241
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCATGATGGTGGTTATGCAGGCCTGGGAGAAACAGG-CTACCACACCAA  243

seq1  AGCCATAGCCATGGGATGCTTAGTAACACCCAATGACCAGTAACAGCTCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATAGCCATGGGATGCTTAGTAACACCCAATGACCAGTAACAGCTCT  293

seq1  CTGGCTTTAAACAGTAGCAACAACAATGTAACTTATAAGTAGATGAACAC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTAAACAGTAGCAACAACAATGTAACTTATAAGTAGATGAACAC  343

seq1  AATAACATCACAGTTCAAAGAAGCAATGCTCGCCACTGAGTTTCAAGGTC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATCACAGTTCAAAGAAGCAATGCTCGCCACTGAGTTTCAAGGTC  393

seq1  TTTATAGAGGCATTTCTTTAGCTATAATGAAACTTGACCTTTGAAGATGT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAGGCATTTCTTTAGCTATAATGAAACTTGACCTTTGAAGATGT  443

seq1  TCAAGTGCAAAGTAAGGGTGACTTTGCTGGGCTGGTTAGGAAGCCTTGCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGCAAAGTAAGGGTGACTTTGCTGGGCTGGTTAGGAAGCCTTGCT  493

seq1  GATCTTACACACCTAGTGGCTCACAGTTGCCTGTAGCAACAGCTTTATAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTACACACCTAGTGGCTCACAGTTGCCTGTAGCAACAGCTTTATAA  543

seq1  GGTCTAACCCTCTTCTGCCTTCCACGGGCAATGTACACATATGACAGACT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAACCCTCTTCTGCCTTCCACGGGCAATGTACACATATGACAGACT  593

seq1  CTCACGTAAAAATAAAAATTTAAGTGTAAAATATAGGATGTAGGGAATGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGTAAAAATAAAAATTTAAGTGTAAAATATAGGATGTAGGGAATGA  643

seq1  GCTGAAGCCCTGATTCAATCCCACTGCAGACCTCTAGACCTTGTGAGCAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGCCCTGATTCAATCCCACTGCAGACCTCTAGACCTTGTGAGCAT  693

seq1  GAGGCTTCAGGACATTGGGCTCTAAAAGGAAGAATAAGAAAGAAAATGGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTCAGGACATTGGGCTCTAAAAGGAAGAATAAGAAAGAAAATGGA  743

seq1  AAAGCATGTTGTACACATGCATGAAAAATATACAATGCTTCTTCTCCAGT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATGTTGTACACATGCATGAAAAATATACAATGCTTCTTCTCCAGT  793

seq1  TAAATGGGAAAATGTTAAAAACACCCAAAGACTCTTAAAGAAGCAGAAAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGGAAAATGTTAAAAACACCCAAAGACTCTTAAAGAAGCAGAAAC  843

seq1  CCAAGTCATAGCAGGCTTGTTTCTGCTAAAAGGATTTGGACATTCATTTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCATAGCAGGCTTGTTTCTGCTAAAAGGATTTGGACATTCATTTG  893

seq1  ATCATACAAACACTGCCAAGCAGATTTGTTCCCATCTTACTCTGGATCCA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACAAACACTGCCAAGCAGATTTGTTCCCATCTTACTCTGGATCCA  943

seq1  AGCACAGAATTGGTAGAGATCACATTGCAAAGAAGTGAGACACCTACACC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAATTGGTAGAGATCACATTGCAAAGAAGTGAGACACCTACACC  993

seq1  CATAGTCTCAGTCTTTACTACCCTCATGCAAAAGGGAACAAAGAGGAGGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTCTCAGTCTTTACTACCCTCATGCAAAAGGGAACAAAGAGGAGGT  1043

seq1  ATTAGTGTGCCATGTCATTACCAGGCTCATGCTCTGGTCCCTCAGCTCCT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGTGCCATGTCATTACCAGGCTCATGCTCTGGTCCCTCAGCTCCT  1093

seq1  GGCCCTCGGGAATCTCTGCTCAAAGAATTC  1121
      ||||||||||||||||||||||||||||||
seq2  GGCCCTCGGGAATCTCTGCTCAAAGAATTC  1123