BAC Information

Click to search

BAC

Clone NameB6Ng01-325D07
Chromosome14 (Build37)
Map Location 21,282,658 - 21,421,353
singlet/doubletdoublet
Overlap geneAnxa7, Zmynd17, Ppp3cb, Usp54
Upstream gene1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18
Downstream geneMyoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk, Myst4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325D07.bB6Ng01-325D07.g
ACCGA113324GA113325
length8791,139
definitionB6Ng01-325D07.b B6Ng01-325D07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,282,658 - 21,283,536)(21,420,191 - 21,421,353)
sequence
gaattcattgtgttattcacttgaataaccgtaccacatacaaagacaga
ggtctagctagaaaaagaataattcaaaataacaaaatgagggctggtga
gatgctgagtgggtaaaagacacctgcctgggcccacatggtggaaggag
agaactaactcctgacttccatatatgcatgatcacatgtacacacctat
actcatatctagtcatccgcacaaaaataatacataaattaatgtaaagg
taaaataagcagatatttacttagtataagaaaatatttttggctctata
aagaagtaaataatcactattatcttggtcttactgagaagataaatatc
taaagagatgacataaagcaaaccgcactctagggttagtcttgtacgcg
tgtattcagaagctgagctctgtgccactgtccagactgcagcctaacct
tagggcactgtcttaaccaatgtgctgtaaagaatgctgcccaatcatct
ctgattggttaataaaagactggactccatgactgggcagaggataggaa
gacgcagatggacctggggaggagggaaggtcccggaaggaaggagagag
gaggtggttactatgaggcagtgaccatgagcatgtcgccagaggacaca
catgagacagagcaagactcagttgtcaagtcatggggcatttatctggt
tattaatagactagttgggttttaatagtctctgaacctgcccagtctag
tttgtagcttgttcacaaactggtgtttttgtgttgtttactagagagct
aaatggaaggaacaggcctacgtgtacaagctttggttgcacacaccttg
ttccttgacttaaaaatattagttaaata
gaattcattacttagctgaggatgcttctctggacgatacctccgttgta
tgcggggttgcaggcattcactattaaacagttttatttgatgctggggt
caaacctagtgctctgtggatgacaggcgagcactttaccaacagagcta
cccagcctttacttgctattgttttggaagcattttggtttttttgtttt
gttatttatgcttccctggctaatcttggatttgctatgttctaggctgg
ctttgaacttggctgtgattctttggtacctagttttcacgttctggtct
aactaccatgatagaatcttgggaagtgttatataagtcctctgaacttt
ctgttatttgggtcacagaaatctttttttctacactttatttataacta
ctataacttgtaacaaaatagtataaataatgagggggtatataatcaaa
atatgtgcatatgtgaaattataaaaataaacattattagccagtcattt
taaatataaaatttaaaaattatttatttttgtttaatgtgtattagtgt
tttgtctgaatgtatgtgtgaggttatcagatcctctgcacctggagtta
cagacagctatgagctgccatgtgggtgctaggaattaaaccctggttcc
ctggaagaccagaccgtgctcttatctctctagccccttctataagtttt
aatattctaaattttagaataagtttattataagttttaataaattgatt
gtaacattttctacaaggcccatttaaaaaatatccatccatttaaaaga
acattttacttttttttttttttttttgagacatggtttctctgtgtagc
cctgggctgtcctggaactcactctgtagcccagcattttacctaatttt
atgaatgacatttttagatcaatatagtgcctgcttggtcagtagttcaa
aaccatctagcagatattgctaaggaaatactatctggagagattctggg
tagatagtcttctgaaactagaaactcttatctgtactagatggataatt
aacttgtgagactccatacgtactgaccgctgggattacgtacatttatt
aattgatgggactccaactgtaactccctttcagctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21282658_21283536
seq2: B6Ng01-325D07.b_42_920

seq1  GAATTCATTGTGTTATTCACTTGAATAACCGTACCACATACAAAGACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTGTTATTCACTTGAATAACCGTACCACATACAAAGACAGA  50

seq1  GGTCTAGCTAGAAAAAGAATAATTCAAAATAACAAAATGAGGGCTGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGCTAGAAAAAGAATAATTCAAAATAACAAAATGAGGGCTGGTGA  100

seq1  GATGCTGAGTGGGTAAAAGACACCTGCCTGGGCCCACATGGTGGAAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGAGTGGGTAAAAGACACCTGCCTGGGCCCACATGGTGGAAGGAG  150

seq1  AGAACTAACTCCTGACTTCCATATATGCATGATCACATGTACACACCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAACTCCTGACTTCCATATATGCATGATCACATGTACACACCTAT  200

seq1  ACTCATATCTAGTCATCCGCACAAAAATAATACATAAATTAATGTAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATCTAGTCATCCGCACAAAAATAATACATAAATTAATGTAAAGG  250

seq1  TAAAATAAGCAGATATTTACTTAGTATAAGAAAATATTTTTGGCTCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAGCAGATATTTACTTAGTATAAGAAAATATTTTTGGCTCTATA  300

seq1  AAGAAGTAAATAATCACTATTATCTTGGTCTTACTGAGAAGATAAATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTAAATAATCACTATTATCTTGGTCTTACTGAGAAGATAAATATC  350

seq1  TAAAGAGATGACATAAAGCAAACCGCACTCTAGGGTTAGTCTTGTACGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGATGACATAAAGCAAACCGCACTCTAGGGTTAGTCTTGTACGCG  400

seq1  TGTATTCAGAAGCTGAGCTCTGTGCCACTGTCCAGACTGCAGCCTAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCAGAAGCTGAGCTCTGTGCCACTGTCCAGACTGCAGCCTAACCT  450

seq1  TAGGGCACTGTCTTAACCAATGTGCTGTAAAGAATGCTGCCCAATCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCACTGTCTTAACCAATGTGCTGTAAAGAATGCTGCCCAATCATCT  500

seq1  CTGATTGGTTAATAAAAGACTGGACTCCATGACTGGGCAGAGGATAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGGTTAATAAAAGACTGGACTCCATGACTGGGCAGAGGATAGGAA  550

seq1  GACGCAGATGGACCTGGGGAGGAGGGAAGGTCCCGGAAGGAAGGAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCAGATGGACCTGGGGAGGAGGGAAGGTCCCGGAAGGAAGGAGAGAG  600

seq1  GAGGTGGTTACTATGAGGCAGTGACCATGAGCATGTCGCCAGAGGACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGTTACTATGAGGCAGTGACCATGAGCATGTCGCCAGAGGACACA  650

seq1  CATGAGACAGAGCAAGACTCAGTTGTCAAGTCATGGGGCATTTATCTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGACAGAGCAAGACTCAGTTGTCAAGTCATGGGGCATTTATCTGGT  700

seq1  TATTAATAGACTAGTTGGGTTTTAATAGTCTCTGAACCTGCCCAGTCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAGACTAGTTGGGTTTTAATAGTCTCTGAACCTGCCCAGTCTAG  750

seq1  TTTGTAGCTTGTTCACAAACTGGTGTTTTTGTGTTGTTTACTAGAGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGCTTGTTCACAAACTGGTGTTTTTGTGTTGTTTACTAGAGAGCT  800

seq1  AAATGGAAGGAACAGGCCTACGTGTACAAGCTTTGGTTGCACACACCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAGGAACAGGCCTACGTGTACAAGCTTTGGTTGCACACACCTTG  850

seq1  TTCCTTGACTTAAAAATATTAGTTAAATA  879
      |||||||||||||||||||||||||||||
seq2  TTCCTTGACTTAAAAATATTAGTTAAATA  879

seq1: chr14_21420191_21421353
seq2: B6Ng01-325D07.g_64_1202 (reverse)

seq1  AGGAGCTGAAAGAGGGGAGTTTTACAGTGTGAGACCCCATTTCAAATAAA  50
      |||||||||||   |||||  |||||||  |||  |||||    ||| ||
seq2  AGGAGCTGAAA---GGGAG--TTACAGTTGGAG-TCCCAT---CAATTAA  41

seq1  TAAATAGTACAGTAAAATCCCAGCCGGTCAGTACGTATGAGAAGTCTCAC  100
      ||||| |||| ||  |||||||| ||||||||||||||  | ||||||||
seq2  TAAAT-GTAC-GT--AATCCCAG-CGGTCAGTACGTAT--GGAGTCTCAC  84

seq1  AAGTTTAATTATCCATTCTTAGTACAGATAAGAGTTTCTAGTTTCAGGAG  150
      ||| ||||||||||||   |||||||||||||||||||||||||||| ||
seq2  AAG-TTAATTATCCAT--CTAGTACAGATAAGAGTTTCTAGTTTCAGAAG  131

seq1  ACTATTCTACCCAGAATCTCTCCAAGATTAGTATTTCCTTAGCAATATCT  200
      |||| |||||||||||||||||| ||| ||||||||||||||||||||||
seq2  ACTA-TCTACCCAGAATCTCTCC-AGA-TAGTATTTCCTTAGCAATATCT  178

seq1  GCCTAGAATGGTTTTTGAACTTACTGACCAAGCAGGCACTATATTGATCT  250
      | |||| |||| |||||||| |||||||||||||||||||||||||||||
seq2  G-CTAG-ATGG-TTTTGAAC-TACTGACCAAGCAGGCACTATATTGATCT  224

seq1  AAAAATGTCATTCATAAAATTAGGTAAAATGCTGGGCTACAGAGTGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTCATTCATAAAATTAGGTAAAATGCTGGGCTACAGAGTGAGTT  274

seq1  CCAGGACAG-CCAGGGCTACACAGAGAAACCATGTCTC-AAAAAAAAAAA  348
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  CCAGGACAGCCCAGGGCTACACAGAGAAACCATGTCTCAAAAAAAAAAAA  324

seq1  AAAAAAGTAAAATGTTCTTTTAAATGGATGGATATTTTTTAAATGGGCCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTAAAATGTTCTTTTAAATGGATGGATATTTTTTAAATGGGCCT  374

seq1  TGTAGAAAATGTTACAATCAATTTATTAAAACTTATAATAAACTTATTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAAATGTTACAATCAATTTATTAAAACTTATAATAAACTTATTCT  424

seq1  AAAATTTAGAATATTAAAACTTATAGAAGGGGCTAGAGAGATAAGAGCAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAGAATATTAAAACTTATAGAAGGGGCTAGAGAGATAAGAGCAC  474

seq1  GGTCTGGTCTTCCAGGGAACCAGGGTTTAATTCCTAGCACCCACATGGCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGTCTTCCAGGGAACCAGGGTTTAATTCCTAGCACCCACATGGCA  524

seq1  GCTCATAGCTGTCTGTAACTCCAGGTGCAGAGGATCTGATAACCTCACAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATAGCTGTCTGTAACTCCAGGTGCAGAGGATCTGATAACCTCACAC  574

seq1  ATACATTCAGACAAAACACTAATACACATTAAACAAAAATAAATAATTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTCAGACAAAACACTAATACACATTAAACAAAAATAAATAATTTT  624

seq1  TAAATTTTATATTTAAAATGACTGGCTAATAATGTTTATTTTTATAATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTATATTTAAAATGACTGGCTAATAATGTTTATTTTTATAATTT  674

seq1  CACATATGCACATATTTTGATTATATACCCCCTCATTATTTATACTATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGCACATATTTTGATTATATACCCCCTCATTATTTATACTATTT  724

seq1  TGTTACAAGTTATAGTAGTTATAAATAAAGTGTAGAAAAAAAGATTTCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACAAGTTATAGTAGTTATAAATAAAGTGTAGAAAAAAAGATTTCTG  774

seq1  TGACCCAAATAACAGAAAGTTCAGAGGACTTATATAACACTTCCCAAGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAAATAACAGAAAGTTCAGAGGACTTATATAACACTTCCCAAGAT  824

seq1  TCTATCATGGTAGTTAGACCAGAACGTGAAAACTAGGTACCAAAGAATCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCATGGTAGTTAGACCAGAACGTGAAAACTAGGTACCAAAGAATCA  874

seq1  CAGCCAAGTTCAAAGCCAGCCTAGAACATAGCAAATCCAAGATTAGCCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAGTTCAAAGCCAGCCTAGAACATAGCAAATCCAAGATTAGCCAG  924

seq1  GGAAGCATAAATAACAAAACAAAAAAACCAAAATGCTTCCAAAACAATAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATAAATAACAAAACAAAAAAACCAAAATGCTTCCAAAACAATAG  974

seq1  CAAGTAAAGGCTGGGTAGCTCTGTTGGTAAAGTGCTCGCCTGTCATCCAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAAGGCTGGGTAGCTCTGTTGGTAAAGTGCTCGCCTGTCATCCAC  1024

seq1  AGAGCACTAGGTTTGACCCCAGCATCAAATAAAACTGTTTAATAGTGAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACTAGGTTTGACCCCAGCATCAAATAAAACTGTTTAATAGTGAAT  1074

seq1  GCCTGCAACCCCGCATACAACGGAGGTATCGTCCAGAGAAGCATCCTCAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAACCCCGCATACAACGGAGGTATCGTCCAGAGAAGCATCCTCAG  1124

seq1  CTAAGTAATGAATTC  1163
      |||||||||||||||
seq2  CTAAGTAATGAATTC  1139