BAC Information

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BAC

Clone NameB6Ng01-325E12
Chromosome14 (Build37)
Map Location 59,754,602 - 59,822,383
singlet/doubletdoublet
Overlap gene1700129C05Rik, EG380907, Rcbtb1
Upstream geneEG668177, EG668182
Downstream geneEG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46, Atp8a2, LOC668162, LOC628768
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325E12.bB6Ng01-325E12.g
ACCGA113381GA113382
length1,1631,036
definitionB6Ng01-325E12.b B6Ng01-325E12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,821,210 - 59,822,383)(59,754,602 - 59,755,596)
sequence
gaattctctcccccaggaaagaggtctttctttctgttgtttttaaagct
ctggtctgaagtggaacaggaagctgcccagagtactcgtaggaaagcta
accttttgtttgtccatttctaaagtgacaaacacattagaaatgacatt
ttgcttaagattccttctctcatatgtgcttatggaagatctaacatctt
ttgaaaaccaaggatttaaactataagcatgatgctaacttcatcaaagg
acaaaccacacagggagaacatggcaccttcgtaattcaaataatatcac
caagtgttaatatcagtaacataacctcatcagtaataaccaaagacata
gaaggaagtaagttttatatttagtcagttacacagtcttcactttaatt
tagtatatttctctgtgatataagatttaaaaatgtgtcaccaaagcatg
ccactagtcaagttgacaagaagtttgtgctcagggttcattattgggac
tctctgtccccacaactttttctcgtgtatcaaaaagttatcccagctaa
cagttggacacatgaagtgttcatgttcacaaactacagactttcctaac
atcttcagaggtttcagaaaagaccttctcaaatgaactccagtacgtga
gtgtgataaagtctatctactactcccagaatacaacagtagcctagtta
tttgaactgatattcagtatctaaattctagaatcaagcagattttggta
gcttcagtgcccaaacttttgctagtggctttttcttacaatctgaaatc
ttactgtggaaactctggaactcctcaaatttccaaagtatatagaactc
acactctaaaatataagatgttttctctaggtgtaaaattacagattatg
tacattcttctttatatttatttatattttctaaatttttcttcactctt
agcttgtaaatgttttgcttgttatcagacaggatttcttctgtgtagct
ctgatggtcctggaactcgatctgtagacttcttataaccgtattattgt
gcctagatatactgaaaacttgaaattttcgtctatattgtgagcaaatt
acatagtagatattactgacatgttagaaatcaattctagtcaggtcagc
agttttatcacat
gaattcttttgcaatgttaaaaaaaaaaaaagtgtgtgtgtgcttctttt
ctcttaagaatcaaggtgttagggtcacaggatgccaattcataggatat
caaaaggttacctggggcaaatgactggacttatgatttgcaagagacga
gctattcagacaaattttttagaatcgcaagagagaactgcttggagaac
tgtctggagcagaacacagagagagagctgtctggagatctccagagaaa
gcagaacagagaaaaagcaatctggaaagctgtcctgagcagaacatagg
ccaccagctgggatccatgatttgactgagagtcctttgtttgttgccac
tcccagacacactttcactcagaacccctctccatcctgaggctggtcct
tggcaacgtggctgtatttgttaaagaaatcaggttccactgaagtgata
ccttttgtaggacagaagccgagtgtttccacagggtgggctctcagatg
ctagcaacagaacttgccagtgtggtaagcattctattactagttctgtg
gtaaagttgcgagactgatggcgtcaaagataccagctgagtccagacac
aatgtggttgtagggttagggtccctgcagagagttcttgagagaccaat
gtgaaaccactattgaaatggagcccctagggaatttgtgattctagggc
tgtggcaatgcattcgaataaaaataatctcttacattctaagagatttc
gctagacttcacatccagagttaaatgtacatgttgacgtcatttaagac
tgatgtcctaccatgtactcattcagcctgtttaacctgcctttaagaga
acaatgtaacaatcaactgtacttgcctgagatgtcccatgtgatcaact
tttacaatctaagctaagacatagctgcaatcttaactcttccattctat
gacccaggacaatgcatgtgtatcgtttgcttaaagcagcaaacacagag
ttgaaggaaaccctataaatctagctttaaggtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_59821210_59822383
seq2: B6Ng01-325E12.b_42_1204 (reverse)

seq1  ATGTGATAAAAACTGCTGGACTTTAACTAGAATAGATTTCCTAACATGTC  50
      ||||||| ||||||||||  |  | |||||||| ||||| ||||||||||
seq2  ATGTGAT-AAAACTGCTGACC--TGACTAGAATTGATTT-CTAACATGTC  46

seq1  AGTTAATTAATCTACTATGTAATTTGGCTCACAATATAGACGAAAAATTT  100
      || ||||  |||||||||||||||| |||||||||||||||| |||||||
seq2  AG-TAAT--ATCTACTATGTAATTT-GCTCACAATATAGACG-AAAATTT  91

seq1  CAAGTTTTCAAGTATATCTAGGCCACAAT-ATACGGTTTATAAGAAGTCT  149
      ||||||||| |||||||||||| |||||| |||||| |||||||||||||
seq2  CAAGTTTTC-AGTATATCTAGG-CACAATAATACGG-TTATAAGAAGTCT  138

seq1  ACAGATCGAGTTCCAGGACCATCAGAGCTACACAG-AGAAATCCTGTCTT  198
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  ACAGATCGAGTTCCAGGACCATCAGAGCTACACAGAAGAAATCCTGTC-T  187

seq1  GATAACAAGCAAAACATTTACAAGCTAAGAGTGAAGAAAAATTTAGAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAAGCAAAACATTTACAAGCTAAGAGTGAAGAAAAATTTAGAAAA  237

seq1  TATAAATAAATATAAAGAAGAATGTACATAATCTGTAATTTTACACCTAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAAATATAAAGAAGAATGTACATAATCTGTAATTTTACACCTAG  287

seq1  AGAAAACATCTTATATTTTAGAGTGTGAGTTCTATATACTTTGGAAATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACATCTTATATTTTAGAGTGTGAGTTCTATATACTTTGGAAATTT  337

seq1  GAGGAGTTCCAGAGTTTCCACAGTAAGATTTCAGATTGTAAGAAAAAGCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTTCCAGAGTTTCCACAGTAAGATTTCAGATTGTAAGAAAAAGCC  387

seq1  ACTAGCAAAAGTTTGGGCACTGAAGCTACCAAAATCTGCTTGATTCTAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAAAAGTTTGGGCACTGAAGCTACCAAAATCTGCTTGATTCTAGA  437

seq1  ATTTAGATACTGAATATCAGTTCAAATAACTAGGCTACTGTTGTATTCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATACTGAATATCAGTTCAAATAACTAGGCTACTGTTGTATTCTG  487

seq1  GGAGTAGTAGATAGACTTTATCACACTCACGTACTGGAGTTCATTTGAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGTAGATAGACTTTATCACACTCACGTACTGGAGTTCATTTGAGA  537

seq1  AGGTCTTTTCTGAAACCTCTGAAGATGTTAGGAAAGTCTGTAGTTTGTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTTTCTGAAACCTCTGAAGATGTTAGGAAAGTCTGTAGTTTGTGA  587

seq1  ACATGAACACTTCATGTGTCCAACTGTTAGCTGGGATAACTTTTTGATAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAACACTTCATGTGTCCAACTGTTAGCTGGGATAACTTTTTGATAC  637

seq1  ACGAGAAAAAGTTGTGGGGACAGAGAGTCCCAATAATGAACCCTGAGCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAAAAAGTTGTGGGGACAGAGAGTCCCAATAATGAACCCTGAGCAC  687

seq1  AAACTTCTTGTCAACTTGACTAGTGGCATGCTTTGGTGACACATTTTTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTTGTCAACTTGACTAGTGGCATGCTTTGGTGACACATTTTTAA  737

seq1  ATCTTATATCACAGAGAAATATACTAAATTAAAGTGAAGACTGTGTAACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATATCACAGAGAAATATACTAAATTAAAGTGAAGACTGTGTAACT  787

seq1  GACTAAATATAAAACTTACTTCCTTCTATGTCTTTGGTTATTACTGATGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAATATAAAACTTACTTCCTTCTATGTCTTTGGTTATTACTGATGA  837

seq1  GGTTATGTTACTGATATTAACACTTGGTGATATTATTTGAATTACGAAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGTTACTGATATTAACACTTGGTGATATTATTTGAATTACGAAGG  887

seq1  TGCCATGTTCTCCCTGTGTGGTTTGTCCTTTGATGAAGTTAGCATCATGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTTCTCCCTGTGTGGTTTGTCCTTTGATGAAGTTAGCATCATGC  937

seq1  TTATAGTTTAAATCCTTGGTTTTCAAAAGATGTTAGATCTTCCATAAGCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTTTAAATCCTTGGTTTTCAAAAGATGTTAGATCTTCCATAAGCA  987

seq1  CATATGAGAGAAGGAATCTTAAGCAAAATGTCATTTCTAATGTGTTTGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAGAGAAGGAATCTTAAGCAAAATGTCATTTCTAATGTGTTTGTC  1037

seq1  ACTTTAGAAATGGACAAACAAAAGGTTAGCTTTCCTACGAGTACTCTGGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGAAATGGACAAACAAAAGGTTAGCTTTCCTACGAGTACTCTGGG  1087

seq1  CAGCTTCCTGTTCCACTTCAGACCAGAGCTTTAAAAACAACAGAAAGAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCCTGTTCCACTTCAGACCAGAGCTTTAAAAACAACAGAAAGAAA  1137

seq1  GACCTCTTTCCTGGGGGAGAGAATTC  1174
      ||||||||||||||||||||||||||
seq2  GACCTCTTTCCTGGGGGAGAGAATTC  1163

seq1: chr14_59754602_59755596
seq2: B6Ng01-325E12.g_66_1060

seq1  GAATTCTTTTGCAATGTTAAAAAAAAAAAAAGTGTGTGTGTGCTTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGCAATGTTAAAAAAAAAAAAAGTGTGTGTGTGCTTCTTTT  50

seq1  CTCTTAAGAATCAAGGTGTTAGGGTCACAGGATGCCAATTCATAGGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGAATCAAGGTGTTAGGGTCACAGGATGCCAATTCATAGGATAT  100

seq1  CAAAAGGTTACCTGGGGCAAATGACTGGACTTATGATTTGCAAGAGACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGTTACCTGGGGCAAATGACTGGACTTATGATTTGCAAGAGACGA  150

seq1  GCTATTCAGACAAATTTTTTAGAATCGCAAGAGAGAACTGCTTGGAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCAGACAAATTTTTTAGAATCGCAAGAGAGAACTGCTTGGAGAAC  200

seq1  TGTCTGGAGCAGAACACAGAGAGAGAGCTGTCTGGAGATCTCCAGAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGAGCAGAACACAGAGAGAGAGCTGTCTGGAGATCTCCAGAGAAA  250

seq1  GCAGAACAGAGAAAAAGCAATCTGGAAAGCTGTCCTGAGCAGAACATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACAGAGAAAAAGCAATCTGGAAAGCTGTCCTGAGCAGAACATAGG  300

seq1  CCACCAGCTGGGATCCATGATTTGACTGAGAGTCCTTTGTTTGTTGCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGCTGGGATCCATGATTTGACTGAGAGTCCTTTGTTTGTTGCCAC  350

seq1  TCCCAGACACACTTTCACTCAGAACCCCTCTCCATCCTGAGGCTGGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGACACACTTTCACTCAGAACCCCTCTCCATCCTGAGGCTGGTCCT  400

seq1  TGGCAACGTGGCTGTATTTGTTAAAGAAATCAGGTTCCACTGAAGTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACGTGGCTGTATTTGTTAAAGAAATCAGGTTCCACTGAAGTGATA  450

seq1  CCTTTTGTAGGACAGAAGCCGAGTGTTTCCACAGGGTGGGCTCTCAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTAGGACAGAAGCCGAGTGTTTCCACAGGGTGGGCTCTCAGATG  500

seq1  CTAGCAACAGAACTTGCCAGTGTGGTAAGCATTCTATTACTAGTTCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAACAGAACTTGCCAGTGTGGTAAGCATTCTATTACTAGTTCTGTG  550

seq1  GTAAAGTTGCGAGACTGATGGCGTCAAAGATACCAGCTGAGTCCAGACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTTGCGAGACTGATGGCGTCAAAGATACCAGCTGAGTCCAGACAC  600

seq1  AATGTGGTTGTAGGGTTAGGGTCCCTGCAGAGAGTTCTTGAGAGACCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTTGTAGGGTTAGGGTCCCTGCAGAGAGTTCTTGAGAGACCAAT  650

seq1  GTGAAACCACTATTGAAATGGAGCCCCTAGGGAATTTGTGATTCTAGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACCACTATTGAAATGGAGCCCCTAGGGAATTTGTGATTCTAGGGC  700

seq1  TGTGGCAATGCATTCGAATAAAAATAATCTCTTACATTCTAAGAGATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAATGCATTCGAATAAAAATAATCTCTTACATTCTAAGAGATTTC  750

seq1  GCTAGACTTCACATCCAGAGTTAAATGTACATGTTGACGTCATTTAAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACTTCACATCCAGAGTTAAATGTACATGTTGACGTCATTTAAGAC  800

seq1  TGATGTCCTACCATGTACTCATTCAGCCTGTTTAACCTGCCTTTAAGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCTACCATGTACTCATTCAGCCTGTTTAACCTGCCTTTAAGAGA  850

seq1  ACAATGTAACAATCAACTGTACTTGCCTGAGATGTCCCATGTGATCAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTAACAATCAACTGTACTTGCCTGAGATGTCCCATGTGATCAACT  900

seq1  TTTACAATCTAAGCTAAGACATAGCTGCAATCTTAACTCTTCCATTCTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATCTAAGCTAAGACATAGCTGCAATCTTAACTCTTCCATTCTAT  950

seq1  GACCCAGGACAATGCATGTGTATCGTTTGCTTAAAGCAGCAAACA  995
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGGACAATGCATGTGTATCGTTTGCTTAAAGCAGCAAACA  995