BAC Information

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BAC

Clone NameB6Ng01-325N03
Chromosome14 (Build37)14 (Build37)
Map Location 8,300,172 - 8,300,6914,083,949 - 4,084,864
singlet/doubletsingletsinglet
Overlap geneLOC100042286, LOC100042258
Upstream geneLOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC666957, LOC100042263
Downstream geneLOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325N03.bB6Ng01-325N03.g
ACCGA113780GA113781
length520923
definitionB6Ng01-325N03.b B6Ng01-325N03.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(8,300,172 - 8,300,691)(4,083,949 - 4,084,864)
sequence
gaattctttctcacctattaaaaactgctagaatttcatgtgtttagcaa
attatattttatatcttggatatcctaggtttggggctaatatccactta
tcagtgagtacatattgtgtgagtttctttgtgaatgtgttacctcactc
aggatgatgccctccaggtccatccatttggctaggaatttcataaattt
attcattttaatagctgagtagtactccattgtgtagatgtgccacattt
tctgtatccattcctctgttgaggggcatctaggttctttccagcttctg
gctattataaataaggctgctatgaacatagtggagcatgtgtcctaaac
acatgaaactgaagaagaatgaatactgaagtgtgaacactatgcccctc
cttagatttgggaacaaaacacccatggaaggagttacagagacaaagtt
tggagctgagatgaaaggatggaccatgtagagactgccatatccaggga
tccaccccataatcagcatc
gaattccagggacataagctccctgaatcactgctttcattggaaaagta
aattttggccagaacaattctgtgctggctaactttatgtcaactaggca
ccagctgaaagcatctgagaggagggaagctcaatggagaaaattcctcc
acaagatcaggctgttgctatacctataggacattttcttaattagattg
gtggatgcggtcccagcccattgtgggtgggaccgtcacttgcatggtgg
tcctaggttctataagaaattaggttgagcaagccataaggaacaagcca
gtaagcagcattccccagtggcctctgcatcagctcctgtctccagattt
ctatactttttgtgttcctgtcctgacttccttccatgatgagctgtgat
gtggaagtataagccaaataaacttttcttcccaagttactttggttatg
atattgcagcaatagaagctctatataacaaatttcaattaaaaattcat
ttaacaaaccaactattaaatctattaggatgtatgttggcacatgatag
caagtaggactctaaatgttaatttctatgataagggtttgttatcccca
agcaccaaggaagtgcaaatcaaccacagtgacattctgcctcatacccc
atacctgtgagcacagatatcaaaaacagagcagagagatcaggcactgc
tgacagcatacagtaaaggcatcattctgtgtctctgcctttccctctgg
gggtcaggaatgcccaccaatgtgccacttggggaaggcaaaactcaggg
gatattaggctgtgttttcttcctagcccctggggtgctgagccacattg
cttagggaaaggctgaaacacagtcacaatatagggggcatagcctgtgt
tttctctgggtgaaaagagcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8300172_8300691
seq2: B6Ng01-325N03.b_48_567

seq1  GAATTCTTTCTCACCTATTAAAAACTGCTAGAATTTCATGTGTTTAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCACCTATTAAAAACTGCTAGAATTTCATGTGTTTAGCAA  50

seq1  ATTATATTTTATATCTTGGATATCCTAGGTTTGGGGCTAATATCCACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTTTATATCTTGGATATCCTAGGTTTGGGGCTAATATCCACTTA  100

seq1  TCAGTGAGTACATATTGTGTGAGTTTCTTTGTGAATGTGTTACCTCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGTACATATTGTGTGAGTTTCTTTGTGAATGTGTTACCTCACTC  150

seq1  AGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTT  200

seq1  ATTCATTTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTT  250
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTCATTTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTGCCACATTT  250

seq1  TCTGTATCCATTCCTCTGTTGAGGGGCATCTAGGTTCTTTCCAGCTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCCATTCCTCTGTTGAGGGGCATCTAGGTTCTTTCCAGCTTCTG  300

seq1  GCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTAAAC  350

seq1  ACATGAAACTGAAGAAGAATGAAGACTGAAGTGTGAACACTATGCCCCTC  400
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACATGAAACTGAAGAAGAATGAATACTGAAGTGTGAACACTATGCCCCTC  400

seq1  CTTAGATTTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATTTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTT  450

seq1  TGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGGA  500

seq1  TCCACCCCATAATCAGCATC  520
      ||||||||||||||||||||
seq2  TCCACCCCATAATCAGCATC  520

seq1: chr14_4083949_4084864
seq2: B6Ng01-325N03.g_70_992

seq1  GAATTCCAGGGACATAAGCTCCCTGAATCACTGCTTTCATTGGAAAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGACATAAGCTCCCTGAATCACTGCTTTCATTGGAAAAGTA  50

seq1  AATTTTGGCCAGAACAATTCTGTGCTGGCTAACTTTATGTCAACTAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGCCAGAACAATTCTGTGCTGGCTAACTTTATGTCAACTAGGCA  100

seq1  CCAGCTGAAAGCATCTGAGAGGAGGGAAGCTCAATGGAGAAAATTCCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGAAAGCATCTGAGAGGAGGGAAGCTCAATGGAGAAAATTCCTCC  150

seq1  ACAAGATCAGGCTGTTGCTATACCTATAGGACATTTTCTTAATTAGATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATCAGGCTGTTGCTATACCTATAGGACATTTTCTTAATTAGATTG  200

seq1  GTGGATGCGGTCCCAGCCCATTGTGGGTGGGACCGTCACTTGCATGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGCGGTCCCAGCCCATTGTGGGTGGGACCGTCACTTGCATGGTGG  250

seq1  TCCTAGGTTCTATAAGAAATTAGGTTGAGCAAGCCATAAGGAACAAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGTTCTATAAGAAATTAGGTTGAGCAAGCCATAAGGAACAAGCCA  300

seq1  GTAAGCAGCATTCCCCAGTGGCCTCTGCATCAGCTCCTGTCTCCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAGCATTCCCCAGTGGCCTCTGCATCAGCTCCTGTCTCCAGATTT  350

seq1  CTATACTTTTTGTGTTCCTGTCCTGACTTCCTTCCATGATGAGCTGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTTTTTGTGTTCCTGTCCTGACTTCCTTCCATGATGAGCTGTGAT  400

seq1  GTGGAAGTATAAGCCAAATAAACTTTTCTTCCCAAGTTACTTTGGTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGTATAAGCCAAATAAACTTTTCTTCCCAAGTTACTTTGGTTATG  450

seq1  ATATTGCAGCAATAGAAGCTCTATATAACAAATTTCAATTAAAAATTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCAGCAATAGAAGCTCTATATAACAAATTTCAATTAAAAATTCAT  500

seq1  TTAACAAACCAACTATTAAATCTATTAGGATGTATGTTGGCACATGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAACCAACTATTAAATCTATTAGGATGTATGTTGGCACATGATAG  550

seq1  CAAGTAGGACTCTAAATGTTAATTTCTATGATAAGGGTTTGTTATCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGGACTCTAAATGTTAATTTCTATGATAAGGGTTTGTTATCCCCA  600

seq1  AGCACCAAGGAAGTGCAAATCAACCACAGTGACATTCTGCCTCATACCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAAGGAAGTGCAAATCAACCACAGTGACATTCTGCCTCATACCCC  650

seq1  ATACCTGTGAGCACAGATATCAAAAACAGAGCAGAGAGATCAGGCACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGTGAGCACAGATATCAAAAACAGAGCAGAGAGATCAGGCACTGC  700

seq1  TGACAGCATACAGTAAAGGCATCATTCTGTGTCTCTGCC-TTCCCTCTGG  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGACAGCATACAGTAAAGGCATCATTCTGTGTCTCTGCCTTTCCCTCTGG  750

seq1  GGGTCAGGAATG-CCACCAATGTGCCACTTGGGGAAGGCAAAACTCA-GG  797
      |||||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  GGGTCAGGAATGCCCACCAATGTGCCACTTGGGGAAGGCAAAACTCAGGG  800

seq1  GATATTAGGCTGTG-TTTCTTCCTAGCCCCTGGGGTGCTGAGCCACATTG  846
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GATATTAGGCTGTGTTTTCTTCCTAGCCCCTGGGGTGCTGAGCCACATTG  850

seq1  CTCAGGG-AAGGCTGAAACACAGTCAC-AGATAGGGGGCCAAGCCTGTG-  893
      || |||| ||||||||||||||||||| | |||||||||  |||||||| 
seq2  CTTAGGGAAAGGCTGAAACACAGTCACAATATAGGGGGCATAGCCTGTGT  900

seq1  TTTCTCTGGGTGAAAAGAGCAGG  916
      |||||||||||||||||||||||
seq2  TTTCTCTGGGTGAAAAGAGCAGG  923