BAC Information

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BAC

Clone NameB6Ng01-328E18
Chromosome14 (Build37)
Map Location 22,099,518 - 22,260,827
singlet/doubletdoublet
Overlap geneAdk
Upstream geneNudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328E18.bB6Ng01-328E18.g
ACCGA115601GA115602
length1,1721,152
definitionB6Ng01-328E18.b B6Ng01-328E18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,259,668 - 22,260,827)(22,099,518 - 22,100,674)
sequence
gaattcctttataatgtgaatgaattaacagcctaagcgcccccctccca
gccctcagattgggccttactgtgtagctctggctggtttggaacaacct
atgtagagcaggctggcctccaactcagtgtgatccacttacttctgcct
ccctagcgctgggattgaaggcatgtgcaccataccaagcttctaagatg
cctgcaccttgaaaaatatatgtaacataaaactgactactttacaaata
tatttttttacattaagtgtgttgtgccatggcgagtatgtggaggttag
aggacaatttgctggagtcagttctccccttggaccatatggatctgggt
attgaactcagaggccccacggcaggcacctttacacagtgagccacttt
gtcagccccattcacttatttcttcttttggaaaatttatttttatgtgt
accgtgttattgcccgtgtgtatagttatttgccatgtgcctggtgccct
tggaggccggaagagggaatcagatcccctggtccaggaatcatggaggg
ttgtgaagtgccatcaaacttgggtcctatgcaagagtgtccagtgctct
taaccagtgacttatcactgcagccccatttaccacctcttactggcttg
gtcatattgagtagcatagaccatggcttgcgtactcatttacctacagg
ctgaagagcatgctggttgcttcttagtcttgtcatttatgggtaaaact
gctatacacatttgtgtacaggtttttgtgcagacataagttttcagctc
atttgggcagccaaggaacacaattgctggatcatatggtaagcatatgt
gtagtgtgtaaggaactgccagactgtattcccaagtggccatcctagtt
ttcattttcaccagcagtgaatcagagtttctggggctgcacatctttgc
catgtatgacacacacacaaactcaagatgctggtgaaacgagatgagaa
atgtcttcctctctgttttagacagtatcctcacaatgggccctagttgg
tcctaaggaatgtctgtctctgtctccttctctgtatcctctgtctcctc
tgtcggcctctgtccggggtgacctctgactctccccctctctctgtctc
ctctctggtctgtctatcgtct
gaattcaaaagaagacgacccattgcattgattaaaaattttattttcct
attatggttgcccatattagacaacagtatacatgtgctgtgttaaaaaa
aataagaaaaataatatagtttcccttgagaaaataatagtttcagtaaa
tttgcaataaaagaaactgactctgttagcaagaaaccaagagtggtata
ttttagatgaatgagttttgacttttcagggtgacatcagaatttatcag
aatttggattctgtcattaaacatgaactcaagtgctcactgtttctgta
gacccactgcttctgttggccatgttggtgctggtcacaagctttgctgc
cctcagagttgtcagtcatttcctcttcgtcacggaactttagactcagt
ggttaatcaacacacaggactataaaaagaagaaatgactcgagctatgc
aagctctgttttttattttgacaatataaaatcatgagttataaatagat
ataaaaacaatccttgagatgtatgtcaggaaattcataaacaagaaacc
tcatttaggtacctaaatagttacaataaaaaataatttgttttcagaaa
taatgttggatagaaagttgtaggtagatgcttacatattctgctcctgg
gaatttagtgttgtaaatgaaatactgtgatttattgtggcatgcctgac
aacctgagctcaatcccaaatccacatataggtaggtagagggaaagtga
caccacagagttgtcctctgacctccatttgtgcactgtggcacatttga
ctctctaatccaattaccagtaataataaataaaacaatattttaaagct
gattaagtgaattatagacagatttctgacttgcttcttgtcataggtca
ttagactttttgactagtgttactttaatctctaaaattataaactatta
ttattggttataattatgaaaaaaagaaaatgaagacttttgttataaaa
agatgggaatatttctggaaacttcagaccttatagtcacctcagtaaga
tgttttaatgtctatcagtagtatttcgtgttctgttttatttggagcaa
catcattaataaccacagatttacaataaaatataattttcttaaaaggc
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22259668_22260827
seq2: B6Ng01-328E18.b_49_1220 (reverse)

seq1  AGACAGATAGACAGA-CAGAGA-GAGACAGAGAGA--GGGAGAGTCAGA-  45
      |||| |||||||||| |||||| ||||||||||||  |||||||||||| 
seq2  AGAC-GATAGACAGACCAGAGAGGAGACAGAGAGAGGGGGAGAGTCAGAG  49

seq1  GTCA-CACAGACAGAGACAGACAGA-GAGACAGA-GATACAGAGA--GAG  90
      |||| | | ||||||| | |||||| |||||||| ||||||||||  |||
seq2  GTCACCCCGGACAGAGGCCGACAGAGGAGACAGAGGATACAGAGAAGGAG  99

seq1  ACAGAGACAGAACATACC-TAGGACCAACTAGGGCC--ATGTGA-GATAC  136
      |||||||||| |||| || |||||||||||||||||   ||||| |||||
seq2  ACAGAGACAG-ACATTCCTTAGGACCAACTAGGGCCCATTGTGAGGATAC  148

seq1  TGTCTAAAACAGAGAGGAAGACATTTCTCATCTCGTTTCACCAGCATCTT  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAAACAGAGAGGAAGACATTTCTCATCTCGTTTCACCAGCATCTT  198

seq1  GAGTTTGTGTGTGTGTCATACATGGCAAAGATGTGCAGCCCCAGAAACTC  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGTGTGTGTGTCATACATGGCAAAGATGTGCAGCCCCAGAAACTC  248

seq1  TGATTCACTGCTGGTGAAAATGAAAACTAGGATGGCCACTTGGGAATACA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCACTGCTGGTGAAAATGAAAACTAGGATGGCCACTTGGGAATACA  298

seq1  GTCTGGCAGTTCCTTACACACTACACATATGCTTACCATATGATCCAGCA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCAGTTCCTTACACACTACACATATGCTTACCATATGATCCAGCA  348

seq1  ATTGTGTTCCTTGGCTGCCCAAATGAGCTGAAAACTTATGTCTGCACAAA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTCCTTGGCTGCCCAAATGAGCTGAAAACTTATGTCTGCACAAA  398

seq1  AACCTGTACACAAATGTGTATAGCAGTTTTACCCATAAATGACAAGACTA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTACACAAATGTGTATAGCAGTTTTACCCATAAATGACAAGACTA  448

seq1  AGAAGCAACCAGCATGCTCTTCAGCCTGTAGGTAAATGAGTACGCAAGCC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAACCAGCATGCTCTTCAGCCTGTAGGTAAATGAGTACGCAAGCC  498

seq1  ATGGTCTATGCTACTCAATATGACCAAGCCAGTAAGAGGTGGTAAATGGG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTATGCTACTCAATATGACCAAGCCAGTAAGAGGTGGTAAATGGG  548

seq1  GCTGCAGTGATAAGTCACTGGTTAAGAGCACTGGACACTCTTGCATAGGA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGTGATAAGTCACTGGTTAAGAGCACTGGACACTCTTGCATAGGA  598

seq1  CCCAAGTTTGATGGCACTTCACAACCCTCCATGATTCCTGGACCAGGGGA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTTTGATGGCACTTCACAACCCTCCATGATTCCTGGACCAGGGGA  648

seq1  TCTGATTCCCTCTTCCGGCCTCCAAGGGCACCAGGCACATGGCAAATAAC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCCCTCTTCCGGCCTCCAAGGGCACCAGGCACATGGCAAATAAC  698

seq1  TATACACACGGGCAATAACACGGTACACATAAAAATAAATTTTCCAAAAG  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACGGGCAATAACACGGTACACATAAAAATAAATTTTCCAAAAG  748

seq1  AAGAAATAAGTGAATGGGGCTGACAAAGTGGCTCACTGTGTAAAGGTGCC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAAGTGAATGGGGCTGACAAAGTGGCTCACTGTGTAAAGGTGCC  798

seq1  TGCCGTGGGGCCTCTGAGTTCAATACCCAGATCCATATGGTCCAAGGGGA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGTGGGGCCTCTGAGTTCAATACCCAGATCCATATGGTCCAAGGGGA  848

seq1  GAACTGACTCCAGCAAATTGTCCTCTAACCTCCACATACTCGCCATGGCA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGACTCCAGCAAATTGTCCTCTAACCTCCACATACTCGCCATGGCA  898

seq1  CAACACACTTAATGTAAAAAAATATATTTGTAAAGTAGTCAGTTTTATGT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACACTTAATGTAAAAAAATATATTTGTAAAGTAGTCAGTTTTATGT  948

seq1  TACATATATTTTTCAAGGTGCAGGCATCTTAGAAGCTTGGTATGGTGCAC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATTTTTCAAGGTGCAGGCATCTTAGAAGCTTGGTATGGTGCAC  998

seq1  ATGCCTTCAATCCCAGCGCTAGGGAGGCAGAAGTAAGTGGATCACACTGA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTCAATCCCAGCGCTAGGGAGGCAGAAGTAAGTGGATCACACTGA  1048

seq1  GTTGGAGGCCAGCCTGCTCTACATAGGTTGTTCCAAACCAGCCAGAGCTA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGGCCAGCCTGCTCTACATAGGTTGTTCCAAACCAGCCAGAGCTA  1098

seq1  CACAGTAAGGCCCAATCTGAGGGCTGGGAGGGGGGCGCTTAGGCTGTTAA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAAGGCCCAATCTGAGGGCTGGGAGGGGGGCGCTTAGGCTGTTAA  1148

seq1  TTCATTCACATTATAAAGGAATTC  1160
      ||||||||||||||||||||||||
seq2  TTCATTCACATTATAAAGGAATTC  1172

seq1: chr14_22099518_22100674
seq2: B6Ng01-328E18.g_65_1216

seq1  GAATTCAAAAGAAGACGACCCATTGCATTGATTAAAAATTTTATTTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGAAGACGACCCATTGCATTGATTAAAAATTTTATTTTCCT  50

seq1  ATTATGGTTGCCCATATTAGACAACAGTATACATGTGCTGTGTTAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGTTGCCCATATTAGACAACAGTATACATGTGCTGTGTTAAAAAA  100

seq1  AATAAGAAAAATAATATAGTTTCCCTTGAGAAAATAATAGTTTCAGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAAAAATAATATAGTTTCCCTTGAGAAAATAATAGTTTCAGTAAA  150

seq1  TTTGCAATAAAAGAAACTGACTCTGTTAGCAAGAAACCAAGAGTGGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAATAAAAGAAACTGACTCTGTTAGCAAGAAACCAAGAGTGGTATA  200

seq1  TTTTAGATGAATGAGTTTTGACTTTTCAGGGTGACATCAGAATTTATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATGAATGAGTTTTGACTTTTCAGGGTGACATCAGAATTTATCAG  250

seq1  AATTTGGATTCTGTCATTAAACATGAACTCAAGTGCTCACTGTTTCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGATTCTGTCATTAAACATGAACTCAAGTGCTCACTGTTTCTGTA  300

seq1  GACCCACTGCTTCTGTTGGCCATGTTGGTGCTGGTCACAAGCTTTGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACTGCTTCTGTTGGCCATGTTGGTGCTGGTCACAAGCTTTGCTGC  350

seq1  CCTCAGAGTTGTCAGTCATTTCCTCTTCGTCACGGAACTTTAGACTCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGTTGTCAGTCATTTCCTCTTCGTCACGGAACTTTAGACTCAGT  400

seq1  GGTTAATCAACACACAGGACTATAAAAAGAAGAAATGACTCGAGCTATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAATCAACACACAGGACTATAAAAAGAAGAAATGACTCGAGCTATGC  450

seq1  AAGCTCTGTTTTTTATTTTGACAATATAAAATCATGAGTTATAAATAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGTTTTTTATTTTGACAATATAAAATCATGAGTTATAAATAGAT  500

seq1  ATAAAAACAATCCTTGAGATGTATGTCAGGAAATTCATAAACAAGAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACAATCCTTGAGATGTATGTCAGGAAATTCATAAACAAGAAACC  550

seq1  TCATTTAGGTACCTAAATAGTTACAATAAAAAATAATTTGTTTTCAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGGTACCTAAATAGTTACAATAAAAAATAATTTGTTTTCAGAAA  600

seq1  TAATGTTGGATAGAAAGTTGTAGGTAGATGCTTACATATTCTGCTCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTGGATAGAAAGTTGTAGGTAGATGCTTACATATTCTGCTCCTGG  650

seq1  GAATTTAGTGTTGTAAATGAAATACTGTGATTTATTGTGGCATGCCTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAGTGTTGTAAATGAAATACTGTGATTTATTGTGGCATGCCTGAC  700

seq1  AACCTGAGCTCAATCCCAAATCCACATATAGGTAGGTAGAGGGAAAGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAGCTCAATCCCAAATCCACATATAGGTAGGTAGAGGGAAAGTGA  750

seq1  CACCACAGAGTTGTCCTCTGACCTCCATTTGTGCACTGTGGCACATTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGAGTTGTCCTCTGACCTCCATTTGTGCACTGTGGCACATTTGA  800

seq1  CTCTCTAATCCAATTACCAGTAATAATAAATAAAACAATATTTTAAAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTAATCCAATTACCAGTAATAATAAATAAAACAATATTTTAAAGCT  850

seq1  GATTAAGTGAATTATAGACAGATTTCTGACTTGCTTCTTGTCATAGGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGTGAATTATAGACAGATTTCTGACTTGCTTCTTGTCATAGGTCA  900

seq1  TTAGACTTTTTGACTAGTGTTACTTTAATCTCTAAAATTATAAACTATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTTTTTGACTAGTGTTACTTTAATCTCTAAAATTATAAACTATTA  950

seq1  TTATTGGTTATAATTATGAAAAAAAGAAAATGAAAGACTTTTGTTATAAA  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTATTGGTTATAATTATGAAAAAAAGAAAATG-AAGACTTTTGTTATAAA  999

seq1  AAGAATGGAATAATTTCTGGAAACTTCAGACCTTATAGTCA-CTCAGTAA  1049
      ||||  ||||| ||||||||||||||||||||||||||||| ||||||||
seq2  AAGATGGGAAT-ATTTCTGGAAACTTCAGACCTTATAGTCACCTCAGTAA  1048

seq1  GATGTTTTAAATTGTTCCTATTCAGTAGTAATTTCGTGTTCTG-TTTATT  1098
      ||||||||||  |||  ||| |||||||| ||||||||||||| ||||||
seq2  GATGTTTTAA--TGT--CTA-TCAGTAGT-ATTTCGTGTTCTGTTTTATT  1092

seq1  T-GAGCAAACCATCATTTAATA--CACAGATTTACAATAAAATATCA-TT  1144
      | ||||||  ||||| ||||||  ||||||||||||||||||||| | ||
seq2  TGGAGCAA--CATCA-TTAATAACCACAGATTTACAATAAAATATAATTT  1139

seq1  TCTTAAAAAGCCA  1157
      |||||||| ||||
seq2  TCTTAAAAGGCCA  1152