BAC Information

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BAC

Clone NameB6Ng01-329K02
Chromosome8 (Build37)14 (Build37)
Map Location 78,316,509 - 78,316,54624,605,515 - 24,606,666
singlet/doubletsingletsinglet
Overlap gene1700007B14Rik
Upstream geneIsx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507, LOC384845, LOC666211, LOC100039229, LOC666036
Downstream geneLOC100039185, EG631594, LOC666226, LOC100039211
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329K02.bB6Ng01-329K02.g
ACCGA116539GA116540
length1071,145
definitionB6Ng01-329K02.b B6Ng01-329K02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(78,316,509 - 78,316,546)(24,605,515 - 24,606,666)
sequence
acacagaaggaccctgcccctcagttggttgtgattggtaaataaatatg
ctggcagccaatggctggtcagggcagacagaggtgggacttttaggatc
cccagac
gaattctctacctctatgagattcttagactggacaccagccttgggggt
ggaattgaacagactttgagatgtaaactaatatacagaggggaaaagac
acaaggtcacatttgaactcccagctttgagtcaaggcaagaggctttat
gctatattttttccactctattgtgattgctaagtcttggaaagaaagcc
aaaagagaaggaaacaaacaaacaaacacagtaaaaatacaaaacagcag
caacaagatggggtaggacttaggacttagttgagggtgtttaggacaca
gactgttttcttgctcttgtatttaaggattgaaagagatctaatccagg
gacttttcatttcctgggtccattcaggtggtgcctctatagaaagcttt
gccaaagatccacagctctgtaataaagagctgccaaggctctgccctaa
agaatgtgactcatgagtaagttctgccatgagagaagactagaaggtgg
cctggccagcatggctgtgtctgccttagctatttgagaccatgtcactt
gcatttccttaatgattaaactgaggtttgcctgaagtcatgcagttcgt
cccaggcagggtgctgactagaacctgtctcctgatcatgtgtagtatgc
tgataactcagatctgtagggtagatctctcagagaaccaggaagcttgt
cagcttcctgtgtgagccttttgcttttccttttctcttaaaaatttctt
ttcatactgcagcctgacttcagatttttccatctggagatttcttttta
gtgtttggaggagcagagggggcggatttcatagccacattgcttcggca
gaaaaacagaaatgcagttttccagtgtgctgtgtccactccccaaattc
ttttagcacccagcgtgagccagtctcgggccctcctactataaagttct
cccagcccactctggggtcattctctcatctctacagctgccttcctgtg
ccccactcccccagtacataaaaagcttgtgggggctgatgacgtcatgg
tctcttcttcatagccagggacttctattcttcctggtttccccgcaccc
cttcatgctcgttcttgcagctattcatactcccattcttaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_78316509_78316546
seq2: B6Ng01-329K02.b_120_157 (reverse)

seq1  GTCTGGGAATCCTAAAAGCCCCACCTCTGTCTGCCCTG  38
      ||||||| |||||||||| |||||||||||||||||||
seq2  GTCTGGGGATCCTAAAAGTCCCACCTCTGTCTGCCCTG  38

seq1: chr14_24605515_24606666
seq2: B6Ng01-329K02.g_65_1209 (reverse)

seq1  CCATTAAG-ATGTGAGTATGAATAGCTGACAAGAAAGAGCATGAAGGGGG  49
      |||||||| ||| ||||||||||||||| |||||| ||||||||| ||||
seq2  CCATTAAGAATGGGAGTATGAATAGCTG-CAAGAACGAGCATGAA-GGGG  48

seq1  TGCGGGGGAAACAGGAAGAAATAGGAGGTCCTGGCTATGAAGGAAGGAGA  99
      ||||||| || ||||||| ||||| ||  |||||||||||||  | ||||
seq2  TGCGGGGAAACCAGGAAG-AATAGAAGTCCCTGGCTATGAAG--AAGAGA  95

seq1  CCATGACGTCATCAGCCCCCACAAGCTTTTTATGGTACTGGGGGAGTGGG  149
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCATGACGTCATCAGCCCCCACAAGCTTTTTAT-GTACTGGGGGAGTGGG  144

seq1  GCACAGGGAAGGCAGCTGTAGAGATGAGAGAATGGACCCCAGGAGTGGGC  199
      ||||| ||||||||||||||||||||||||||| ||||||| ||||||||
seq2  GCACA-GGAAGGCAGCTGTAGAGATGAGAGAAT-GACCCCA-GAGTGGGC  191

seq1  TGGGAGAACTTTATAGTAGGAGGG-CCGAGACTGGCTCACGCTGGGTGCT  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGGGAGAACTTTATAGTAGGAGGGCCCGAGACTGGCTCACGCTGGGTGCT  241

seq1  AAAAGAATTTGGGGAGTGGACACAGCACACTGGAAAACTGCATTTCTGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATTTGGGGAGTGGACACAGCACACTGGAAAACTGCATTTCTGTT  291

seq1  TTTCTGCCGAAGCAATGTGGCTATGAAATCCGCCCCCTCTGCTCCTCCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCGAAGCAATGTGGCTATGAAATCCGCCCCCTCTGCTCCTCCAA  341

seq1  ACACTAAAAAGAAATCTCCAGATGGAAAAATCTGAAGTCAGGCTGCAGTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAAAAGAAATCTCCAGATGGAAAAATCTGAAGTCAGGCTGCAGTA  391

seq1  TGAAAAGAAATTTTTAAGAGAAAAGGAAAAGCAAAAGGCTCACACAGGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAAATTTTTAAGAGAAAAGGAAAAGCAAAAGGCTCACACAGGAA  441

seq1  GCTGACAAGCTTCCTGGTTCTCTGAGAGATCTACCCTACAGATCTGAGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAAGCTTCCTGGTTCTCTGAGAGATCTACCCTACAGATCTGAGTT  491

seq1  ATCAGCATACTACACATGATCAGGAGACAGGTTCTAGTCAGCACCCTGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCATACTACACATGATCAGGAGACAGGTTCTAGTCAGCACCCTGCC  541

seq1  TGGGACGAACTGCATGACTTCAGGCAAACCTCAGTTTAATCATTAAGGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACGAACTGCATGACTTCAGGCAAACCTCAGTTTAATCATTAAGGAA  591

seq1  ATGCAAGTGACATGGTCTCAAATAGCTAAGGCAGACACAGCCATGCTGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGTGACATGGTCTCAAATAGCTAAGGCAGACACAGCCATGCTGGC  641

seq1  CAGGCCACCTTCTAGTCTTCTCTCATGGCAGAACTTACTCATGAGTCACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACCTTCTAGTCTTCTCTCATGGCAGAACTTACTCATGAGTCACA  691

seq1  TTCTTTAGGGCAGAGCCTTGGCAGCTCTTTATTACAGAGCTGTGGATCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGGGCAGAGCCTTGGCAGCTCTTTATTACAGAGCTGTGGATCTT  741

seq1  TGGCAAAGCTTTCTATAGAGGCACCACCTGAATGGACCCAGGAAATGAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGCTTTCTATAGAGGCACCACCTGAATGGACCCAGGAAATGAAA  791

seq1  AGTCCCTGGATTAGATCTCTTTCAATCCTTAAATACAAGAGCAAGAAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTGGATTAGATCTCTTTCAATCCTTAAATACAAGAGCAAGAAAAC  841

seq1  AGTCTGTGTCCTAAACACCCTCAACTAAGTCCTAAGTCCTACCCCATCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGTCCTAAACACCCTCAACTAAGTCCTAAGTCCTACCCCATCTT  891

seq1  GTTGCTGCTGTTTTGTATTTTTACTGTGTTTGTTTGTTTGTTTCCTTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGCTGTTTTGTATTTTTACTGTGTTTGTTTGTTTGTTTCCTTCTC  941

seq1  TTTTGGCTTTCTTTCCAAGACTTAGCAATCACAATAGAGTGGAAAAAATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCTTTCTTTCCAAGACTTAGCAATCACAATAGAGTGGAAAAAATA  991

seq1  TAGCATAAAGCCTCTTGCCTTGACTCAAAGCTGGGAGTTCAAATGTGACC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAAAGCCTCTTGCCTTGACTCAAAGCTGGGAGTTCAAATGTGACC  1041

seq1  TTGTGTCTTTTCCCCTCTGTATATTAGTTTACATCTCAAAGTCTGTTCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTTTTCCCCTCTGTATATTAGTTTACATCTCAAAGTCTGTTCAA  1091

seq1  TTCCACCCCCAAGGCTGGTGTCCAGTCTAAGAATCTCATAGAGGTAGAGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCCCCAAGGCTGGTGTCCAGTCTAAGAATCTCATAGAGGTAGAGA  1141

seq1  ATTC  1152
      ||||
seq2  ATTC  1145