BAC Information

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BAC

Clone NameB6Ng01-330G20
Chromosome14 (Build37)
Map Location 93,253,431 - 93,254,295
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665377, LOC638252
Downstream genePcdh9, LOC668566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330G20.bB6Ng01-330G20.g
ACCGA117094GA117095
length8711,200
definitionB6Ng01-330G20.b B6Ng01-330G20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtagagctgtgctgggaatgttatgtctggttaaaattggtc
tgataagaagaaatccaattcaaacaggaaggatagagctatgacatttg
caggaaatgggtagaaatagagatcaccctggtaaacatgtcaaacaagg
ataaatatgtgctacataagacatgtaatatgtaaacctatacacagaga
gtgtgtagatattgtagggatttgtttgagggtaggaagcaatgcaagga
gtgaatatggataataagaaagaattatgtgagagaggaaaataacaaga
acataaaatttgttttgtttcatctataaagtttatattttattttttaa
ctcatctgcatctacaactccagaaaagaaatgaacaaagaatagtattg
gaggagatatgagtgcactgtagtgacatacatgtttgaaaatgaactct
gattctaaaaaaatactaaaataattataacataaacatgcattttatac
ctcattagggtacaaagaatgctttggagacgtaggtaaaatgtctattt
atggaatcacttctacataatgagtatgcatgttgtatgttcatgttcat
aattacctgaagatacaaaatttacgcaaataactagatgactcatttta
aaatatggactttatcaaacaaatattttaagtcactaagttctttaagt
aacgaacatcaaagtcactttggtaggctagatcaaaggtttatgttcat
gtctcactttccccatctaaaattcagtaattttttgcaggctttagcat
gtattaggagagactggtttttagcaaaaggtgcttagattaacatctgc
tgaattgaatcctcctgactc

gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgccaactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgatgaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggag
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacatgtagatcaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtgggaagaaaagacagcattttcaacaattggtgct
ggcacaactgggttgttaatcatgtagaagaatgcgaatcgatccatact
tatctccttgttactaaggtcaatctaatggatcaaagaacttctcataa
accagagacactgaaacctatagaggagaaaggtgggggaaaagctttga
agatatggggcacaggggcaaattccctgaacgacagcatgcctgtgtcg
tagatcgagatgaccaaatggaaacctaatgtatacctctcaaaagcgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_93253431_93254295
seq2: B6Ng01-330G20.b_45_915

seq1  GAATTCTTGTAGAGCTGTGCTGGGAATGTTATGTCTGGTTAAAATTGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTAGAGCTGTGCTGGGAATGTTATGTCTGGTTAAAATTGGTC  50

seq1  TGATAAGAAGAAATCCAATTCAAACAGGAAGGATAGAGCTATGACATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGAAGAAATCCAATTCAAACAGGAAGGATAGAGCTATGACATTTG  100

seq1  CAGGAAATGGGTAGAAATAGAGATCACCCTGGTAAACATGTCAAACAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATGGGTAGAAATAGAGATCACCCTGGTAAACATGTCAAACAAGG  150

seq1  ATAAATATGTGCTACATAAGACATGTAATATGTAAACCTATACACAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATGTGCTACATAAGACATGTAATATGTAAACCTATACACAGAGA  200

seq1  GTGTGTAGATATTGTAGGGATTTGTTTGAGGGTAGGAAGCAATGCAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGATATTGTAGGGATTTGTTTGAGGGTAGGAAGCAATGCAAGGA  250

seq1  GTGAATATGGATAATAAGAAAGAATTATGTGAGAGAGGAAAATAACAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATGGATAATAAGAAAGAATTATGTGAGAGAGGAAAATAACAAGA  300

seq1  ACATAAAATTTGTTTTGTTTCATCTATAAAGTTTATATTTTATTTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATTTGTTTTGTTTCATCTATAAAGTTTATATTTTATTTTTTAA  350

seq1  CTCATCTGCATCTACAACTCCAGAAAAGAAATGAACAAAGAATAGTATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGCATCTACAACTCCAGAAAAGAAATGAACAAAGAATAGTATTG  400

seq1  GAGGAGATATGAGTGCACTGTAGTGACATACATGTTTGAAAATGAACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGATATGAGTGCACTGTAGTGACATACATGTTTGAAAATGAACTCT  450

seq1  GATTCTAAAAAAATACTAAAATAATTATAACATAAACATGCATTTTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAAAAAAATACTAAAATAATTATAACATAAACATGCATTTTATAC  500

seq1  CTCATTAGGGTACAAAGAATGCTTTGGAGACGTAGGTAAAATGTCTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTAGGGTACAAAGAATGCTTTGGAGACGTAGGTAAAATGTCTATTT  550

seq1  ATGGAATCACTTCTACATAATGAGTATGCATGTTGTATGTTCATGTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATCACTTCTACATAATGAGTATGCATGTTGTATGTTCATGTTCAT  600

seq1  AATTACCTGAAGATACAAAATTTACGCAAATAACTAGATGACTCATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCTGAAGATACAAAATTTACGCAAATAACTAGATGACTCATTTTA  650

seq1  AAATATGGACTTTATCAAACAAATA-TTTAAGTCACTAAGTTCTTTAAGT  699
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAATATGGACTTTATCAAACAAATATTTTAAGTCACTAAGTTCTTTAAGT  700

seq1  AACGAACATCAAAGTCAC-TTGGTAGGCTAGATCAAAGGTTTATGTTCAT  748
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACGAACATCAAAGTCACTTTGGTAGGCTAGATCAAAGGTTTATGTTCAT  750

seq1  GTCTCACTTT-CCCATCTAAAATTCAGTAATTTTTTGCAGGCTTTAGCAT  797
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTTTCCCCATCTAAAATTCAGTAATTTTTTGCAGGCTTTAGCAT  800

seq1  GTATTAGGAGAGACTGG-TTTTAGCAAAAGG-GCTTAGATCAGCA-CTGC  844
      ||||||||||||||||| ||||||||||||| |||||||| | || ||||
seq2  GTATTAGGAGAGACTGGTTTTTAGCAAAAGGTGCTTAGATTAACATCTGC  850

seq1  TGAATTGAATCTCCCTGACGC  865
      |||||||||||  |||||| |
seq2  TGAATTGAATCCTCCTGACTC  871


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